| Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
|---|---|
| Accession | NC_009697 |
| Length | 3,863,450 |
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The map label for this gene is 153930828
Identifier: 153930828
GI number: 153930828
Start: 2964481
End: 2965191
Strand: Reverse
Name: 153930828
Synonym: CLB_2813
Alternate gene names: NA
Gene position: 2965191-2964481 (Counterclockwise)
Preceding gene: 153931944
Following gene: 153933621
Centisome position: 76.75
GC content: 30.66
Gene sequence:
>711_bases ATGTATATTATAAATCCAAATTTGAAATTTAGAGGATTATCTTATGGTAATAATCCTAAAATGATTATACTTCATCATGC AGAAGCTTCAGGCTGTAGCATAAAAGATATTCATTTATGGCATTTAAATAATGGTTGGAGTGGGTGCGGTTATAATTATT TTATAAAGAAGGATGGTGCTATTTATAAAGGTAGACCAGATAATGCTATAGGTGCCCATTGTTTGAGTTATAATGGTGTG TCTATTGGTATCTGTATGGAAGGTAGATTTAATGTAGAGGAAATGGGAGCGGATCAATACAACTCTTTAAAAGATTTAAC CTGCTACTTACAAAATAAATATAATATTAATAAAATATATGGTCATAGAGAATTAAATGAAACAGAGTGTCCAGGAAACA ACTTCCCGCTACATAGAATAAAAAAAGAATGTTTAGGTGGAAATAATTCGATAGAGAATTCAAGTAATAATAAAGGAAGT AAAAGCTATCCAGGATATTTACTTAAATATAATCCTGGTAGATTTGATGCTAATGTAAAATTAATACAAAGTAAATTGCA GAATATAGGTTATAGTGTAGGAAAGTATGGAGTGGATGGATATTTTGGAGATGGTACGCTACTGGCTGTTAAGTGTTTTC AGAGGGATTGTAATTTGATGATAGATGGAATTATAGGAGTAGATACGTGGAAGAGAATAATGAGAGAGTAA
Upstream 100 bases:
>100_bases TTTAAGGTAAATAGAGTAAAGTTTCATTAGAATAATTATTTTTATTTATTGGTACAGTAATAGAAGAGTTTTTATAAGTT TAAATAAAGGGGGAGCGGTC
Downstream 100 bases:
>100_bases AAAATACATTTTATTAAGATTAAAACCTATCGTAAGTAGTGAATATAAGCGCTTAGGATAGGTTTTTACTGGGTTATATT ACGTGATAAAAGTATTTTGT
Product: N-acetylmuramoyl-L-alanine amidase
Products: NA
Alternate protein names: Prophage; Bifunctional Protein N-Acetylmuramoyl-L-Alanine Amidase; Negative Regulator Of Beta-Lactamase Expression; Phage Related N-Acetylmuramoyl-L-Alanine Amidase
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MYIINPNLKFRGLSYGNNPKMIILHHAEASGCSIKDIHLWHLNNGWSGCGYNYFIKKDGAIYKGRPDNAIGAHCLSYNGV SIGICMEGRFNVEEMGADQYNSLKDLTCYLQNKYNINKIYGHRELNETECPGNNFPLHRIKKECLGGNNSIENSSNNKGS KSYPGYLLKYNPGRFDANVKLIQSKLQNIGYSVGKYGVDGYFGDGTLLAVKCFQRDCNLMIDGIIGVDTWKRIMRE
Sequences:
>Translated_236_residues MYIINPNLKFRGLSYGNNPKMIILHHAEASGCSIKDIHLWHLNNGWSGCGYNYFIKKDGAIYKGRPDNAIGAHCLSYNGV SIGICMEGRFNVEEMGADQYNSLKDLTCYLQNKYNINKIYGHRELNETECPGNNFPLHRIKKECLGGNNSIENSSNNKGS KSYPGYLLKYNPGRFDANVKLIQSKLQNIGYSVGKYGVDGYFGDGTLLAVKCFQRDCNLMIDGIIGVDTWKRIMRE >Mature_236_residues MYIINPNLKFRGLSYGNNPKMIILHHAEASGCSIKDIHLWHLNNGWSGCGYNYFIKKDGAIYKGRPDNAIGAHCLSYNGV SIGICMEGRFNVEEMGADQYNSLKDLTCYLQNKYNINKIYGHRELNETECPGNNFPLHRIKKECLGGNNSIENSSNNKGS KSYPGYLLKYNPGRFDANVKLIQSKLQNIGYSVGKYGVDGYFGDGTLLAVKCFQRDCNLMIDGIIGVDTWKRIMRE
Specific function: Unknown
COG id: COG3409
COG function: function code M; Putative peptidoglycan-binding domain-containing protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24651867, Length=134, Percent_Identity=33.5820895522388, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24645946, Length=132, Percent_Identity=34.8484848484849, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI21356551, Length=132, Percent_Identity=34.8484848484849, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24645949, Length=132, Percent_Identity=34.8484848484849, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24651865, Length=132, Percent_Identity=31.0606060606061, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24586649, Length=132, Percent_Identity=31.0606060606061, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI281365921, Length=129, Percent_Identity=31.0077519379845, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI45551539, Length=129, Percent_Identity=31.0077519379845, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI28574426, Length=129, Percent_Identity=34.1085271317829, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI281365923, Length=129, Percent_Identity=31.0077519379845, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26589; Mature: 26589
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYIINPNLKFRGLSYGNNPKMIILHHAEASGCSIKDIHLWHLNNGWSGCGYNYFIKKDGA CEEECCCCEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCC IYKGRPDNAIGAHCLSYNGVSIGICMEGRFNVEEMGADQYNSLKDLTCYLQNKYNINKIY EECCCCCCCCCCEEEECCCEEEEEEECCCCCHHHCCCCHHCCHHHEEEEECCCCCEEEEE GHRELNETECPGNNFPLHRIKKECLGGNNSIENSSNNKGSKSYPGYLLKYNPGRFDANVK CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHH LIQSKLQNIGYSVGKYGVDGYFGDGTLLAVKCFQRDCNLMIDGIIGVDTWKRIMRE HHHHHHHHCCCCCCCCCCCCEECCCEEEEEEEHHCCCCEEEEEEECHHHHHHHHCC >Mature Secondary Structure MYIINPNLKFRGLSYGNNPKMIILHHAEASGCSIKDIHLWHLNNGWSGCGYNYFIKKDGA CEEECCCCEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCC IYKGRPDNAIGAHCLSYNGVSIGICMEGRFNVEEMGADQYNSLKDLTCYLQNKYNINKIY EECCCCCCCCCCEEEECCCEEEEEEECCCCCHHHCCCCHHCCHHHEEEEECCCCCEEEEE GHRELNETECPGNNFPLHRIKKECLGGNNSIENSSNNKGSKSYPGYLLKYNPGRFDANVK CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHH LIQSKLQNIGYSVGKYGVDGYFGDGTLLAVKCFQRDCNLMIDGIIGVDTWKRIMRE HHHHHHHHCCCCCCCCCCCCEECCCEEEEEEEHHCCCCEEEEEEECHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA