Definition Clostridium botulinum A str. ATCC 19397, complete genome.
Accession NC_009697
Length 3,863,450

Click here to switch to the map view.

The map label for this gene is 153930828

Identifier: 153930828

GI number: 153930828

Start: 2964481

End: 2965191

Strand: Reverse

Name: 153930828

Synonym: CLB_2813

Alternate gene names: NA

Gene position: 2965191-2964481 (Counterclockwise)

Preceding gene: 153931944

Following gene: 153933621

Centisome position: 76.75

GC content: 30.66

Gene sequence:

>711_bases
ATGTATATTATAAATCCAAATTTGAAATTTAGAGGATTATCTTATGGTAATAATCCTAAAATGATTATACTTCATCATGC
AGAAGCTTCAGGCTGTAGCATAAAAGATATTCATTTATGGCATTTAAATAATGGTTGGAGTGGGTGCGGTTATAATTATT
TTATAAAGAAGGATGGTGCTATTTATAAAGGTAGACCAGATAATGCTATAGGTGCCCATTGTTTGAGTTATAATGGTGTG
TCTATTGGTATCTGTATGGAAGGTAGATTTAATGTAGAGGAAATGGGAGCGGATCAATACAACTCTTTAAAAGATTTAAC
CTGCTACTTACAAAATAAATATAATATTAATAAAATATATGGTCATAGAGAATTAAATGAAACAGAGTGTCCAGGAAACA
ACTTCCCGCTACATAGAATAAAAAAAGAATGTTTAGGTGGAAATAATTCGATAGAGAATTCAAGTAATAATAAAGGAAGT
AAAAGCTATCCAGGATATTTACTTAAATATAATCCTGGTAGATTTGATGCTAATGTAAAATTAATACAAAGTAAATTGCA
GAATATAGGTTATAGTGTAGGAAAGTATGGAGTGGATGGATATTTTGGAGATGGTACGCTACTGGCTGTTAAGTGTTTTC
AGAGGGATTGTAATTTGATGATAGATGGAATTATAGGAGTAGATACGTGGAAGAGAATAATGAGAGAGTAA

Upstream 100 bases:

>100_bases
TTTAAGGTAAATAGAGTAAAGTTTCATTAGAATAATTATTTTTATTTATTGGTACAGTAATAGAAGAGTTTTTATAAGTT
TAAATAAAGGGGGAGCGGTC

Downstream 100 bases:

>100_bases
AAAATACATTTTATTAAGATTAAAACCTATCGTAAGTAGTGAATATAAGCGCTTAGGATAGGTTTTTACTGGGTTATATT
ACGTGATAAAAGTATTTTGT

Product: N-acetylmuramoyl-L-alanine amidase

Products: NA

Alternate protein names: Prophage; Bifunctional Protein N-Acetylmuramoyl-L-Alanine Amidase; Negative Regulator Of Beta-Lactamase Expression; Phage Related N-Acetylmuramoyl-L-Alanine Amidase

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MYIINPNLKFRGLSYGNNPKMIILHHAEASGCSIKDIHLWHLNNGWSGCGYNYFIKKDGAIYKGRPDNAIGAHCLSYNGV
SIGICMEGRFNVEEMGADQYNSLKDLTCYLQNKYNINKIYGHRELNETECPGNNFPLHRIKKECLGGNNSIENSSNNKGS
KSYPGYLLKYNPGRFDANVKLIQSKLQNIGYSVGKYGVDGYFGDGTLLAVKCFQRDCNLMIDGIIGVDTWKRIMRE

Sequences:

>Translated_236_residues
MYIINPNLKFRGLSYGNNPKMIILHHAEASGCSIKDIHLWHLNNGWSGCGYNYFIKKDGAIYKGRPDNAIGAHCLSYNGV
SIGICMEGRFNVEEMGADQYNSLKDLTCYLQNKYNINKIYGHRELNETECPGNNFPLHRIKKECLGGNNSIENSSNNKGS
KSYPGYLLKYNPGRFDANVKLIQSKLQNIGYSVGKYGVDGYFGDGTLLAVKCFQRDCNLMIDGIIGVDTWKRIMRE
>Mature_236_residues
MYIINPNLKFRGLSYGNNPKMIILHHAEASGCSIKDIHLWHLNNGWSGCGYNYFIKKDGAIYKGRPDNAIGAHCLSYNGV
SIGICMEGRFNVEEMGADQYNSLKDLTCYLQNKYNINKIYGHRELNETECPGNNFPLHRIKKECLGGNNSIENSSNNKGS
KSYPGYLLKYNPGRFDANVKLIQSKLQNIGYSVGKYGVDGYFGDGTLLAVKCFQRDCNLMIDGIIGVDTWKRIMRE

Specific function: Unknown

COG id: COG3409

COG function: function code M; Putative peptidoglycan-binding domain-containing protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI24651867, Length=134, Percent_Identity=33.5820895522388, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24645946, Length=132, Percent_Identity=34.8484848484849, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21356551, Length=132, Percent_Identity=34.8484848484849, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24645949, Length=132, Percent_Identity=34.8484848484849, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24651865, Length=132, Percent_Identity=31.0606060606061, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24586649, Length=132, Percent_Identity=31.0606060606061, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI281365921, Length=129, Percent_Identity=31.0077519379845, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI45551539, Length=129, Percent_Identity=31.0077519379845, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28574426, Length=129, Percent_Identity=34.1085271317829, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI281365923, Length=129, Percent_Identity=31.0077519379845, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26589; Mature: 26589

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIINPNLKFRGLSYGNNPKMIILHHAEASGCSIKDIHLWHLNNGWSGCGYNYFIKKDGA
CEEECCCCEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCC
IYKGRPDNAIGAHCLSYNGVSIGICMEGRFNVEEMGADQYNSLKDLTCYLQNKYNINKIY
EECCCCCCCCCCEEEECCCEEEEEEECCCCCHHHCCCCHHCCHHHEEEEECCCCCEEEEE
GHRELNETECPGNNFPLHRIKKECLGGNNSIENSSNNKGSKSYPGYLLKYNPGRFDANVK
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHH
LIQSKLQNIGYSVGKYGVDGYFGDGTLLAVKCFQRDCNLMIDGIIGVDTWKRIMRE
HHHHHHHHCCCCCCCCCCCCEECCCEEEEEEEHHCCCCEEEEEEECHHHHHHHHCC
>Mature Secondary Structure
MYIINPNLKFRGLSYGNNPKMIILHHAEASGCSIKDIHLWHLNNGWSGCGYNYFIKKDGA
CEEECCCCEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCC
IYKGRPDNAIGAHCLSYNGVSIGICMEGRFNVEEMGADQYNSLKDLTCYLQNKYNINKIY
EECCCCCCCCCCEEEECCCEEEEEEECCCCCHHHCCCCHHCCHHHEEEEECCCCCEEEEE
GHRELNETECPGNNFPLHRIKKECLGGNNSIENSSNNKGSKSYPGYLLKYNPGRFDANVK
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHH
LIQSKLQNIGYSVGKYGVDGYFGDGTLLAVKCFQRDCNLMIDGIIGVDTWKRIMRE
HHHHHHHHCCCCCCCCCCCCEECCCEEEEEEEHHCCCCEEEEEEECHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA