| Definition | Anaeromyxobacter sp. Fw109-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009675 |
| Length | 5,277,990 |
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The map label for this gene is mdmC [H]
Identifier: 153002937
GI number: 153002937
Start: 74009
End: 74686
Strand: Reverse
Name: mdmC [H]
Synonym: Anae109_0058
Alternate gene names: 153002937
Gene position: 74686-74009 (Counterclockwise)
Preceding gene: 153002940
Following gene: 153002935
Centisome position: 1.42
GC content: 76.99
Gene sequence:
>678_bases ATGGGATCTCCCCCGGTGAAGGGGTTCGGGCAGGGCGACCCCGCGCTCGCGGCGTGGGCGGAGTCGGTGTACGCGCCGGA GGACGAGGTGCTGCGCGAGATCCGGGCGCGGAGCGACGCGGCCGGCCTCCCGCCCATCCACGTGGGCCGCTTCGACGGGC TCCACCTCGAGGTGCTCGCCCGCGCCTGCGCCGCGCGCCGGATCGTCGAGATCGGCACGCTCGCCGGGTACAGCGGCGTC TGCCTCGCGCGGGCGCTCCCGGAGGACGGCGTGCTCCACACGTTCGAGCTGCTCGAGCGGCACGCCGCGCTCGCGCGGGC CGCGTTCGCGCGCGCGGGCGTGGCGGGCCGCGTCCGGGTCCACGTCGGCCCCGCCCTGGAGCGGCTGCGGGAGGTGGAGG GCGAGGGCCCCTTCGACCTGGTCTTCGTGGACGCCGACAAGGGCGGCTACCCCGCCTACCTCGCCTGGGCGGAGGAGCAC CTGCGCGTGGGCGGCGTCCTGCTCGCCGACAACACCTTCGGCTTCGGCCACGTGCACGAGCCCGCCTCGGCCGGCGAGGA CGCCGCCGCGATGGAGCCGCTGCGGCGCTTCAGCGAGCGGCTCGCCCGCGGCGGCCGCTTCCGCGCGACGATGCTCCCGA CGGCGGAGGGGCTATCGCTCGGAGTGAAGGTGCGCTGA
Upstream 100 bases:
>100_bases GCGCTCGCCGGAGCGCCGCGCCTGCCTCGCGCCGATCGCCCCACCCGCCCGGCACGTGCGACCCGCGCCGGGGACGGTAA CTCGCTCCGCGGAGGACAGG
Downstream 100 bases:
>100_bases GCCCGCTACAGCAATTCCAGCTGCATGTGCTCGCGCAACGGCTCCGACCGCACGCCCTCCTTGCGGAGCGCGGCGGAGAG CGCGTCGGCGTGGCCGTGCA
Product: O-methyltransferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MGSPPVKGFGQGDPALAAWAESVYAPEDEVLREIRARSDAAGLPPIHVGRFDGLHLEVLARACAARRIVEIGTLAGYSGV CLARALPEDGVLHTFELLERHAALARAAFARAGVAGRVRVHVGPALERLREVEGEGPFDLVFVDADKGGYPAYLAWAEEH LRVGGVLLADNTFGFGHVHEPASAGEDAAAMEPLRRFSERLARGGRFRATMLPTAEGLSLGVKVR
Sequences:
>Translated_225_residues MGSPPVKGFGQGDPALAAWAESVYAPEDEVLREIRARSDAAGLPPIHVGRFDGLHLEVLARACAARRIVEIGTLAGYSGV CLARALPEDGVLHTFELLERHAALARAAFARAGVAGRVRVHVGPALERLREVEGEGPFDLVFVDADKGGYPAYLAWAEEH LRVGGVLLADNTFGFGHVHEPASAGEDAAAMEPLRRFSERLARGGRFRATMLPTAEGLSLGVKVR >Mature_224_residues GSPPVKGFGQGDPALAAWAESVYAPEDEVLREIRARSDAAGLPPIHVGRFDGLHLEVLARACAARRIVEIGTLAGYSGVC LARALPEDGVLHTFELLERHAALARAAFARAGVAGRVRVHVGPALERLREVEGEGPFDLVFVDADKGGYPAYLAWAEEHL RVGGVLLADNTFGFGHVHEPASAGEDAAAMEPLRRFSERLARGGRFRATMLPTAEGLSLGVKVR
Specific function: 4-O-methyltransferase for the lactone ring of midecamycin and other macrolide antibiotics [H]
COG id: COG4122
COG function: function code R; Predicted O-methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. Type 3 family [H]
Homologues:
Organism=Homo sapiens, GI31542747, Length=169, Percent_Identity=36.6863905325444, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI72001127, Length=230, Percent_Identity=26.0869565217391, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17565612, Length=179, Percent_Identity=26.2569832402235, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002935 [H]
Pfam domain/function: PF01596 Methyltransf_3 [H]
EC number: NA
Molecular weight: Translated: 23977; Mature: 23845
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSPPVKGFGQGDPALAAWAESVYAPEDEVLREIRARSDAAGLPPIHVGRFDGLHLEVLA CCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHH RACAARRIVEIGTLAGYSGVCLARALPEDGVLHTFELLERHAALARAAFARAGVAGRVRV HHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE HVGPALERLREVEGEGPFDLVFVDADKGGYPAYLAWAEEHLRVGGVLLADNTFGFGHVHE EECHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEHHHHHHHHCCCEEEECCCCCCCCCCC PASAGEDAAAMEPLRRFSERLARGGRFRATMLPTAEGLSLGVKVR CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEC >Mature Secondary Structure GSPPVKGFGQGDPALAAWAESVYAPEDEVLREIRARSDAAGLPPIHVGRFDGLHLEVLA CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHH RACAARRIVEIGTLAGYSGVCLARALPEDGVLHTFELLERHAALARAAFARAGVAGRVRV HHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE HVGPALERLREVEGEGPFDLVFVDADKGGYPAYLAWAEEHLRVGGVLLADNTFGFGHVHE EECHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEHHHHHHHHCCCEEEECCCCCCCCCCC PASAGEDAAAMEPLRRFSERLARGGRFRATMLPTAEGLSLGVKVR CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1629172 [H]