| Definition | Anaeromyxobacter sp. Fw109-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009675 |
| Length | 5,277,990 |
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The map label for this gene is uraA [H]
Identifier: 153002935
GI number: 153002935
Start: 71234
End: 72538
Strand: Reverse
Name: uraA [H]
Synonym: Anae109_0056
Alternate gene names: 153002935
Gene position: 72538-71234 (Counterclockwise)
Preceding gene: 153002937
Following gene: 153002927
Centisome position: 1.37
GC content: 69.2
Gene sequence:
>1305_bases ATGAAAGCGGAGCAGCGCACCGTCGACGTGGGAGAGCGGCTCCCGCTCTTGCAGAGCATCCCCCTCTCGCTGCAGCACCT GTTCGCGATGTTCGGCGCGACGGTGCTCGTGCCGTACCTCGTCGGCCTCGACACCTCGGTGACGCTCTTCACCTCCGGCG TCGGCACGCTGCTCTACATCTTCGTGACGAAGGGGAAGATCCCCGCCTACCTCGGGTCGTCCTTCGCCTTCATCGCCGCG TTCATCGGCCTGCTCGGCGCCAAGGCGGGAGAGCTCGCCTCGCCCGACCGCATCGCGGTCGCCATGGGCGGCTGCGTGGT GGTGGGCCTCGTCTACATCGTCGTGGCGGCCATCATCGGCAAGTTCGGCACCGGCTGGATCGACCGGCTGCTGCCGCCCG TGGTCATCGGCTCGGTGGTGATGGTCATCGGCCTCGGCCTCGCCCGCACCGCGGTGGTGACGATGGCGATGGAGGGCGGC ACGGGGACCTATCACCCCGAGTACTTCGCGGTGGCCCTCTCCGCGCTCGCGATCGCCATCCTGGCGGCGGTGTTCCTGAA GGGGTTCCTCGGCGTCATCCCCATCCTGATCGGCATCGTGGGCGGCTACCTCGTGGCGCTCCTCGCCGGGCAGGTGAGCT TCGACGCGGTGAGGTCCGCCGCGCCGGTCGCGCTGCCCCCCTTCGTGCCGCCGAAGTTCACCTGGGGCGCGATCCTCACG CTCGCCCCGATCTCGCTCGTCGTCATCACCGAGCACATCGGCCACCTCATCGTCACGAACAACATCGTGGGGCGCGACTT CGTGAAGGATCCGGGCCTCCACCGCTCGCTCGCGGGCGACGGCGTGGCCACCGCCTTCGCGGGCCTCCTGGGCGGCCCGC CCAACACCACCTACGGCGAGAACATCGGGGTCATGGCGATCACGCGGGTGTTCAGCGTGTGGGTCATCGGCGGCGCGGCC GTGATCGCCATCGTGATGTCGTTCTTCCCGCCGGTGGGCGCGCTCATCCGCACCATCCCGACCCACGTGATGGGCGGCAT CTGCATCCTGCTCTTCGGGATCATCGCCTCCGCCGGCATCCGCATGCTGGTCGAGGCCGGCATCGACTTCTCCCAGAAGC GCAACCTCATCATCGCCTCGGTGGTGCTCGTCATCGGCATCGGCGGCGCGAAGCTGCACATCGGCGGCATCGAGTTCGGC GAGATGTCCCTCGCCGCCTACGTCGGCATGCTGCTGAACCTGATCCTGCCCCGCGCCATGGAGAAGGGCGCCGGCGAGGC GGCCGGCGAGGCGGCGGACGTCTAG
Upstream 100 bases:
>100_bases GTCAGCCCCCTCTGGCATCATGCGCGCCGCCATGGCCCTACCTCTTCGAAGAGACACCGAGCCCGCCCGCAGGGACGTGG GCTCCCCCCGGGAGGCGAAG
Downstream 100 bases:
>100_bases ATCCCCGAGCGGCGGCGAATCCTCGGCGCCCGGTCCCGCCCGCGCGGGGCCGGGCGCTTCTACTTCAGGAGCAGGTAGTA GAGCCGCCCCGGCTGCTTCA
Product: uracil-xanthine permease
Products: Proton [Cytoplasm]; uracil [Cytoplasm] [C]
Alternate protein names: Uracil transporter [H]
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MKAEQRTVDVGERLPLLQSIPLSLQHLFAMFGATVLVPYLVGLDTSVTLFTSGVGTLLYIFVTKGKIPAYLGSSFAFIAA FIGLLGAKAGELASPDRIAVAMGGCVVVGLVYIVVAAIIGKFGTGWIDRLLPPVVIGSVVMVIGLGLARTAVVTMAMEGG TGTYHPEYFAVALSALAIAILAAVFLKGFLGVIPILIGIVGGYLVALLAGQVSFDAVRSAAPVALPPFVPPKFTWGAILT LAPISLVVITEHIGHLIVTNNIVGRDFVKDPGLHRSLAGDGVATAFAGLLGGPPNTTYGENIGVMAITRVFSVWVIGGAA VIAIVMSFFPPVGALIRTIPTHVMGGICILLFGIIASAGIRMLVEAGIDFSQKRNLIIASVVLVIGIGGAKLHIGGIEFG EMSLAAYVGMLLNLILPRAMEKGAGEAAGEAADV
Sequences:
>Translated_434_residues MKAEQRTVDVGERLPLLQSIPLSLQHLFAMFGATVLVPYLVGLDTSVTLFTSGVGTLLYIFVTKGKIPAYLGSSFAFIAA FIGLLGAKAGELASPDRIAVAMGGCVVVGLVYIVVAAIIGKFGTGWIDRLLPPVVIGSVVMVIGLGLARTAVVTMAMEGG TGTYHPEYFAVALSALAIAILAAVFLKGFLGVIPILIGIVGGYLVALLAGQVSFDAVRSAAPVALPPFVPPKFTWGAILT LAPISLVVITEHIGHLIVTNNIVGRDFVKDPGLHRSLAGDGVATAFAGLLGGPPNTTYGENIGVMAITRVFSVWVIGGAA VIAIVMSFFPPVGALIRTIPTHVMGGICILLFGIIASAGIRMLVEAGIDFSQKRNLIIASVVLVIGIGGAKLHIGGIEFG EMSLAAYVGMLLNLILPRAMEKGAGEAAGEAADV >Mature_434_residues MKAEQRTVDVGERLPLLQSIPLSLQHLFAMFGATVLVPYLVGLDTSVTLFTSGVGTLLYIFVTKGKIPAYLGSSFAFIAA FIGLLGAKAGELASPDRIAVAMGGCVVVGLVYIVVAAIIGKFGTGWIDRLLPPVVIGSVVMVIGLGLARTAVVTMAMEGG TGTYHPEYFAVALSALAIAILAAVFLKGFLGVIPILIGIVGGYLVALLAGQVSFDAVRSAAPVALPPFVPPKFTWGAILT LAPISLVVITEHIGHLIVTNNIVGRDFVKDPGLHRSLAGDGVATAFAGLLGGPPNTTYGENIGVMAITRVFSVWVIGGAA VIAIVMSFFPPVGALIRTIPTHVMGGICILLFGIIASAGIRMLVEAGIDFSQKRNLIIASVVLVIGIGGAKLHIGGIEFG EMSLAAYVGMLLNLILPRAMEKGAGEAAGEAADV
Specific function: Transport of uracil in the cell [H]
COG id: COG2233
COG function: function code F; Xanthine/uracil permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788843, Length=412, Percent_Identity=49.5145631067961, Blast_Score=382, Evalue=1e-107, Organism=Escherichia coli, GI87081818, Length=426, Percent_Identity=42.2535211267606, Blast_Score=290, Evalue=1e-79, Organism=Escherichia coli, GI87082181, Length=405, Percent_Identity=27.1604938271605, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1790087, Length=408, Percent_Identity=27.4509803921569, Blast_Score=98, Evalue=8e-22, Organism=Escherichia coli, GI87082178, Length=406, Percent_Identity=27.3399014778325, Blast_Score=91, Evalue=1e-19, Organism=Drosophila melanogaster, GI21356175, Length=433, Percent_Identity=25.4041570438799, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006042 - InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 44662; Mature: 44662
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAEQRTVDVGERLPLLQSIPLSLQHLFAMFGATVLVPYLVGLDTSVTLFTSGVGTLLYI CCCCCCHHCHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH FVTKGKIPAYLGSSFAFIAAFIGLLGAKAGELASPDRIAVAMGGCVVVGLVYIVVAAIIG HEECCCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH KFGTGWIDRLLPPVVIGSVVMVIGLGLARTAVVTMAMEGGTGTYHPEYFAVALSALAIAI HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHH LAAVFLKGFLGVIPILIGIVGGYLVALLAGQVSFDAVRSAAPVALPPFVPPKFTWGAILT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHH LAPISLVVITEHIGHLIVTNNIVGRDFVKDPGLHRSLAGDGVATAFAGLLGGPPNTTYGE HHHHHHHHHHHHHCCEEEECCCCCCHHHCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCC NIGVMAITRVFSVWVIGGAAVIAIVMSFFPPVGALIRTIPTHVMGGICILLFGIIASAGI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMLVEAGIDFSQKRNLIIASVVLVIGIGGAKLHIGGIEFGEMSLAAYVGMLLNLILPRAM HHHHHHCCCHHHHCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH EKGAGEAAGEAADV HCCCCCCCCCCCCC >Mature Secondary Structure MKAEQRTVDVGERLPLLQSIPLSLQHLFAMFGATVLVPYLVGLDTSVTLFTSGVGTLLYI CCCCCCHHCHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH FVTKGKIPAYLGSSFAFIAAFIGLLGAKAGELASPDRIAVAMGGCVVVGLVYIVVAAIIG HEECCCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH KFGTGWIDRLLPPVVIGSVVMVIGLGLARTAVVTMAMEGGTGTYHPEYFAVALSALAIAI HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHH LAAVFLKGFLGVIPILIGIVGGYLVALLAGQVSFDAVRSAAPVALPPFVPPKFTWGAILT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHH LAPISLVVITEHIGHLIVTNNIVGRDFVKDPGLHRSLAGDGVATAFAGLLGGPPNTTYGE HHHHHHHHHHHHHCCEEEECCCCCCHHHCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCC NIGVMAITRVFSVWVIGGAAVIAIVMSFFPPVGALIRTIPTHVMGGICILLFGIIASAGI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMLVEAGIDFSQKRNLIIASVVLVIGIGGAKLHIGGIEFGEMSLAAYVGMLLNLILPRAM HHHHHHCCCHHHHCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH EKGAGEAAGEAADV HCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; uracil [Periplasm] [C]
Specific reaction: Proton [Periplasm] + uracil [Periplasm] = Proton [Cytoplasm] + uracil [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]