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The map label for this gene is ssb [H]

Identifier: 152977672

GI number: 152977672

Start: 4073338

End: 4073832

Strand: Reverse

Name: ssb [H]

Synonym: Bcer98_4013

Alternate gene names: 152977672

Gene position: 4073832-4073338 (Counterclockwise)

Preceding gene: 152977673

Following gene: 152977671

Centisome position: 99.68

GC content: 44.04

Gene sequence:

>495_bases
TTGATGAATCGTGTTATCCTCGTTGGTCGTCTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTTGCAGTAGC
TACTTTCACGTTAGCGGTGAATCGTGCTTTTACAAATCAGCAAGGTGAGCGTGAAGCTGACTTTATTAACTGTGTAATAT
GGCGTAAACAAGCAGAAAACGTGGCAAATTATTTGAAAAAGGGTAGCTTAGCAGGCGTTGATGGCCGTCTTCAAACTCGT
AATTATGAGGGACAAGATGGTAGACGTGTATATGTAACAGAAGTTCTGGCAGAGAGCGTACAATTTTTAGAGCCGCGTAA
TAGCGGTGGGGAGCAACGCGGTTCTTTCAATCAGCAGCCATCAGGAGCTGGTTTCGGAAACCAAGGCTCTAACCCATTTG
GTCAATCTGGTAATTCTGGATTTACGAAGAATGACGATCCATTTTCAAATGTAGGGCAACCGATCGATATTTCGGACGAC
GATTTACCATTCTAA

Upstream 100 bases:

>100_bases
AGAATTCGATCGTTTAGCTAAGATCAACGAAGATATCATTCGTCACATCGTTGTTAAAGAAGAAGAATAATAATTAAGAT
ATATAGGGAGAGTGGTTCGA

Downstream 100 bases:

>100_bases
TGGTATAGATCGGTTATTTTTAACAAAGAATGGAGGGAAATGAACATGGCAGGACGCAAAGGTGGACGTGCGAAACGTCG
TAAAGTGTGTTTCTTCACAG

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MMNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFTNQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTR
NYEGQDGRRVYVTEVLAESVQFLEPRNSGGEQRGSFNQQPSGAGFGNQGSNPFGQSGNSGFTKNDDPFSNVGQPIDISDD
DLPF

Sequences:

>Translated_164_residues
MMNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFTNQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTR
NYEGQDGRRVYVTEVLAESVQFLEPRNSGGEQRGSFNQQPSGAGFGNQGSNPFGQSGNSGFTKNDDPFSNVGQPIDISDD
DLPF
>Mature_164_residues
MMNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFTNQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTR
NYEGQDGRRVYVTEVLAESVQFLEPRNSGGEQRGSFNQQPSGAGFGNQGSNPFGQSGNSGFTKNDDPFSNVGQPIDISDD
DLPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=115, Percent_Identity=38.2608695652174, Blast_Score=80, Evalue=5e-17,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 17995; Mature: 17995

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFTNQQGEREADFINCVIWRKQAEN
CCCCEEEEEECCCCCCCEECCCCEEEEEEEHHHHHHHCCCCCCCCHHHEEHHHHHHHHHH
VANYLKKGSLAGVDGRLQTRNYEGQDGRRVYVTEVLAESVQFLEPRNSGGEQRGSFNQQP
HHHHHHCCCCCCCCCEEECCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SGAGFGNQGSNPFGQSGNSGFTKNDDPFSNVGQPIDISDDDLPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MMNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFTNQQGEREADFINCVIWRKQAEN
CCCCEEEEEECCCCCCCEECCCCEEEEEEEHHHHHHHCCCCCCCCHHHEEHHHHHHHHHH
VANYLKKGSLAGVDGRLQTRNYEGQDGRRVYVTEVLAESVQFLEPRNSGGEQRGSFNQQP
HHHHHHCCCCCCCCCEEECCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SGAGFGNQGSNPFGQSGNSGFTKNDDPFSNVGQPIDISDDDLPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]