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The map label for this gene is cisA [H]

Identifier: 152977635

GI number: 152977635

Start: 4036850

End: 4038097

Strand: Reverse

Name: cisA [H]

Synonym: Bcer98_3976

Alternate gene names: 152977635

Gene position: 4038097-4036850 (Counterclockwise)

Preceding gene: 152977636

Following gene: 152977634

Centisome position: 98.8

GC content: 32.13

Gene sequence:

>1248_bases
ATGAATCATAGTAAGCGTAAAGTAGCTATTTATATTAGGGTATCGACCGAAGAGCAAGCGAATGAGGGATTCTCTCTAGG
AGCACAAGAAGATTATTTAAAACAATATGCTAACACTAAAGGTTATGAGGTATACGATATATATGTTGATGATGGCTATT
CGGGAAAGGATTATAATCGACCTGAAATACAGCGTTTATTTAAAGACCTTTATCAAGAGAAATTTACGGGGATATTAGTT
AAATCTGTTGACCGAATATCAAGAAGAGTAAGTGATGTTACTAAGTTAATAGATGATGTCCTTGCTCCAAGAAAATGTTG
TGTGTTAGTAAGTGATAATAACTTAGATAGTTCTACGACTGGAGGGACTGCATTTATCCAACTATTGGCTACATTTGCTG
AATATGAGCGTTCAATGATTGTACAAAGGGTAAAATCTGGTATGTCTAAGCGAGCAGAGTTAGGTTACTGGAATGGGGGA
CGTGTACTTGGATATGACGTTAAGAATAAGGAGCTAAAAATTAATAAAGAAGAAGCTGAGATTGTACGGAGGGTATTTCA
TTTAAGAGCTGGAGGAAAAGGGTATAAATCCATTGCTATTATTTTAAATCAACAAGGTTTTAAAACAAAGAGAGGAAGAT
TATTTAGTATAGGTACAATTAAAACAATTTTAGAGAATCCACTATATATCGGATACTGTAGATGGGGACGACATAAGAAT
TGGAACGTAGAAAGAAGAAAAGGAAAAGCAGACGAATATAAATTTGTTAAAGGTAAACATGAACCTATTGTATCTGAGGA
GTTATGGAAAAGAGTCCAAGGTGTGAATTATGCCCACAAGAAAAGTATTTCTAAAAATCGTAATTTTAATGGGGAATTTG
TACTATCTGGTATTTTACGTTGTCCATCTTGTGGAGCAGGGATGGTAATGTGTAAAACTAAAAAACGAGATAAATCAGGA
TATCATTTATATTATATGTGCCAAGCATTTCATAGTAAGGGGAAGTTGGCTTGTAAATCTAATCTTATTCGTAAGGAAGA
TATTGAGGAAAAGGTATTGCAATGTATTAATAAAATTATTTTAATACCTTCAATTTTTGATAAAACGTTTGAACGTATCC
AAGAGAAACAAGAAAGTGGAATAGAAAGGATAAAAAATGATTTATCATATATAAATGAAGAATTAAAAAGAAAGAAGCAA
TTTATAAAAAACTTAATAAGGATTATTTTGATGAGAAAATTCGAGTAG

Upstream 100 bases:

>100_bases
TGGAAGAGACAAAATGGAATCAATTAATAGAAATATTAGGGTGGATTGTAATTGAAAATATAGAACTAAAAGACATTACT
AATTAATCGGGGGAAGGAAC

Downstream 100 bases:

>100_bases
AAACATATACGGAATTATCCGAGCCCTTAAGAGAAGAGATAGTTGAACTAGAAAGGGAAAAAAGTAAATTAGATAGGAAA
ATTGAGAGTTCGGAAATACC

Product: resolvase domain-containing protein

Products: NA

Alternate protein names: Stage IV sporulation protein CA [H]

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MNHSKRKVAIYIRVSTEEQANEGFSLGAQEDYLKQYANTKGYEVYDIYVDDGYSGKDYNRPEIQRLFKDLYQEKFTGILV
KSVDRISRRVSDVTKLIDDVLAPRKCCVLVSDNNLDSSTTGGTAFIQLLATFAEYERSMIVQRVKSGMSKRAELGYWNGG
RVLGYDVKNKELKINKEEAEIVRRVFHLRAGGKGYKSIAIILNQQGFKTKRGRLFSIGTIKTILENPLYIGYCRWGRHKN
WNVERRKGKADEYKFVKGKHEPIVSEELWKRVQGVNYAHKKSISKNRNFNGEFVLSGILRCPSCGAGMVMCKTKKRDKSG
YHLYYMCQAFHSKGKLACKSNLIRKEDIEEKVLQCINKIILIPSIFDKTFERIQEKQESGIERIKNDLSYINEELKRKKQ
FIKNLIRIILMRKFE

Sequences:

>Translated_415_residues
MNHSKRKVAIYIRVSTEEQANEGFSLGAQEDYLKQYANTKGYEVYDIYVDDGYSGKDYNRPEIQRLFKDLYQEKFTGILV
KSVDRISRRVSDVTKLIDDVLAPRKCCVLVSDNNLDSSTTGGTAFIQLLATFAEYERSMIVQRVKSGMSKRAELGYWNGG
RVLGYDVKNKELKINKEEAEIVRRVFHLRAGGKGYKSIAIILNQQGFKTKRGRLFSIGTIKTILENPLYIGYCRWGRHKN
WNVERRKGKADEYKFVKGKHEPIVSEELWKRVQGVNYAHKKSISKNRNFNGEFVLSGILRCPSCGAGMVMCKTKKRDKSG
YHLYYMCQAFHSKGKLACKSNLIRKEDIEEKVLQCINKIILIPSIFDKTFERIQEKQESGIERIKNDLSYINEELKRKKQ
FIKNLIRIILMRKFE
>Mature_415_residues
MNHSKRKVAIYIRVSTEEQANEGFSLGAQEDYLKQYANTKGYEVYDIYVDDGYSGKDYNRPEIQRLFKDLYQEKFTGILV
KSVDRISRRVSDVTKLIDDVLAPRKCCVLVSDNNLDSSTTGGTAFIQLLATFAEYERSMIVQRVKSGMSKRAELGYWNGG
RVLGYDVKNKELKINKEEAEIVRRVFHLRAGGKGYKSIAIILNQQGFKTKRGRLFSIGTIKTILENPLYIGYCRWGRHKN
WNVERRKGKADEYKFVKGKHEPIVSEELWKRVQGVNYAHKKSISKNRNFNGEFVLSGILRCPSCGAGMVMCKTKKRDKSG
YHLYYMCQAFHSKGKLACKSNLIRKEDIEEKVLQCINKIILIPSIFDKTFERIQEKQESGIERIKNDLSYINEELKRKKQ
FIKNLIRIILMRKFE

Specific function: Putative site-specific recombinase having a very important role in sporulation. It probably plays a role in the recombination of spoIIIC and spoIVCB to form sigma K factor [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 recombinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011109
- InterPro:   IPR006118
- InterPro:   IPR006119 [H]

Pfam domain/function: PF07508 Recombinase; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 48178; Mature: 48178

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS00397 RECOMBINASES_1 ; PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHSKRKVAIYIRVSTEEQANEGFSLGAQEDYLKQYANTKGYEVYDIYVDDGYSGKDYNR
CCCCCEEEEEEEEECCCHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCC
PEIQRLFKDLYQEKFTGILVKSVDRISRRVSDVTKLIDDVLAPRKCCVLVSDNNLDSSTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
GGTAFIQLLATFAEYERSMIVQRVKSGMSKRAELGYWNGGRVLGYDVKNKELKINKEEAE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEECHHHHH
IVRRVFHLRAGGKGYKSIAIILNQQGFKTKRGRLFSIGTIKTILENPLYIGYCRWGRHKN
HHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEHHHHHHHHCCCCEEEEEECCCCCC
WNVERRKGKADEYKFVKGKHEPIVSEELWKRVQGVNYAHKKSISKNRNFNGEFVLSGILR
CCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHH
CPSCGAGMVMCKTKKRDKSGYHLYYMCQAFHSKGKLACKSNLIRKEDIEEKVLQCINKII
CCCCCCCEEEEECCCCCCCCCEEEEHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHH
LIPSIFDKTFERIQEKQESGIERIKNDLSYINEELKRKKQFIKNLIRIILMRKFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNHSKRKVAIYIRVSTEEQANEGFSLGAQEDYLKQYANTKGYEVYDIYVDDGYSGKDYNR
CCCCCEEEEEEEEECCCHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCC
PEIQRLFKDLYQEKFTGILVKSVDRISRRVSDVTKLIDDVLAPRKCCVLVSDNNLDSSTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
GGTAFIQLLATFAEYERSMIVQRVKSGMSKRAELGYWNGGRVLGYDVKNKELKINKEEAE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEECHHHHH
IVRRVFHLRAGGKGYKSIAIILNQQGFKTKRGRLFSIGTIKTILENPLYIGYCRWGRHKN
HHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEHHHHHHHHCCCCEEEEEECCCCCC
WNVERRKGKADEYKFVKGKHEPIVSEELWKRVQGVNYAHKKSISKNRNFNGEFVLSGILR
CCCHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHH
CPSCGAGMVMCKTKKRDKSGYHLYYMCQAFHSKGKLACKSNLIRKEDIEEKVLQCINKII
CCCCCCCEEEEECCCCCCCCCEEEEHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHH
LIPSIFDKTFERIQEKQESGIERIKNDLSYINEELKRKKQFIKNLIRIILMRKFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2105293; 7704261; 8969508; 9384377 [H]