Click here to switch to the map view.

The map label for this gene is ytmP [H]

Identifier: 152977057

GI number: 152977057

Start: 3431687

End: 3432475

Strand: Reverse

Name: ytmP [H]

Synonym: Bcer98_3364

Alternate gene names: 152977057

Gene position: 3432475-3431687 (Counterclockwise)

Preceding gene: 152977058

Following gene: 152977055

Centisome position: 83.98

GC content: 38.91

Gene sequence:

>789_bases
ATGGAATGGTTGGAACAATTATTAGGAAAAGAGTGGAGTCTTATACCGGCTGGTGGAGTAACAGGCGATGCGTATATTGC
ACAAAATGGACAACAAAAGCTGTTTTTAAAGCGGAATACATCGCCCTTTTTAGCGGTATTATCAGCAGAGGGAATTGTTC
CAAAATTACTTTGGACAAGAAGGATAACGAATGGTGATGTAATTTCAGCTCAAAAGTGGCTATCAGGGAAAAAGTTAGAG
CCAGAGGATATGAAATTGGAACGTGTTGCAAAACTTTTAAAGAAAATACATTCCTCCAAAGCGCTTGTGCAGATGATCCA
ACGGCTTGGGAAACAGCCGCTTCATGCGCAGGAGTTATTGCAGCAATTGTATTTTGTTTTAAGAGGAGATATAAAGGAAA
GCCAAACAATTAAAGCGGGGCTTCAATATTTGAAAGCCTCATTATATGATATTGAATACGATGAGTTTGTCGTATGTCAT
TGTGATGTGAATCATAATAATTGGCTATTATCGGATGAAGATGAGTTATTCTTAATTGATTGGGATGGGGCTGTTATTGC
AGATCCTGCTCTCGATCTTGGCATGCTATTATATTGGTATGTGCCGCGCGAACAATGGGATGAATGGTTAGCCTACTACG
GCATTGAAAAGACGGATTCGTTACTTCGACGTATGAAGTGGTATGTAGTAGCACAAACTATTTTATCTATTCAATGGCAT
ATAGCAAAAAAGCAGCAAGCAGAAGCTGAATATTGGCATCAATATTTACAGCAACTACTTGCTGAATAG

Upstream 100 bases:

>100_bases
TTCAACTACAGTACAATATATGAATCCACGACATGTTAAGATGTTGCGGATTTTCTTTTCATAATTATAAAAGATAAGGA
TTTGTTAACGGGTAATGGAT

Downstream 100 bases:

>100_bases
TAAAGAGTTAAGAAAAATTGTCCATTCCAGCAATCCACTCAGTAAGTTGTGCTTGATTATTGGAAATATGATTGTCCAAA
TCAGAAGAATATTTACCCGA

Product: aminoglycoside phosphotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MEWLEQLLGKEWSLIPAGGVTGDAYIAQNGQQKLFLKRNTSPFLAVLSAEGIVPKLLWTRRITNGDVISAQKWLSGKKLE
PEDMKLERVAKLLKKIHSSKALVQMIQRLGKQPLHAQELLQQLYFVLRGDIKESQTIKAGLQYLKASLYDIEYDEFVVCH
CDVNHNNWLLSDEDELFLIDWDGAVIADPALDLGMLLYWYVPREQWDEWLAYYGIEKTDSLLRRMKWYVVAQTILSIQWH
IAKKQQAEAEYWHQYLQQLLAE

Sequences:

>Translated_262_residues
MEWLEQLLGKEWSLIPAGGVTGDAYIAQNGQQKLFLKRNTSPFLAVLSAEGIVPKLLWTRRITNGDVISAQKWLSGKKLE
PEDMKLERVAKLLKKIHSSKALVQMIQRLGKQPLHAQELLQQLYFVLRGDIKESQTIKAGLQYLKASLYDIEYDEFVVCH
CDVNHNNWLLSDEDELFLIDWDGAVIADPALDLGMLLYWYVPREQWDEWLAYYGIEKTDSLLRRMKWYVVAQTILSIQWH
IAKKQQAEAEYWHQYLQQLLAE
>Mature_262_residues
MEWLEQLLGKEWSLIPAGGVTGDAYIAQNGQQKLFLKRNTSPFLAVLSAEGIVPKLLWTRRITNGDVISAQKWLSGKKLE
PEDMKLERVAKLLKKIHSSKALVQMIQRLGKQPLHAQELLQQLYFVLRGDIKESQTIKAGLQYLKASLYDIEYDEFVVCH
CDVNHNNWLLSDEDELFLIDWDGAVIADPALDLGMLLYWYVPREQWDEWLAYYGIEKTDSLLRRMKWYVVAQTILSIQWH
IAKKQQAEAEYWHQYLQQLLAE

Specific function: Unknown

COG id: COG0510

COG function: function code M; Predicted choline kinase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aminoglycoside phosphotransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 30534; Mature: 30534

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWLEQLLGKEWSLIPAGGVTGDAYIAQNGQQKLFLKRNTSPFLAVLSAEGIVPKLLWTR
CCHHHHHHCCCCCEEECCCCCCCHHEECCCCEEEEEEECCCCEEEEEECCCCHHHHHHHH
RITNGDVISAQKWLSGKKLEPEDMKLERVAKLLKKIHSSKALVQMIQRLGKQPLHAQELL
CCCCCCEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHH
QQLYFVLRGDIKESQTIKAGLQYLKASLYDIEYDEFVVCHCDVNHNNWLLSDEDELFLID
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCCCEEEEE
WDGAVIADPALDLGMLLYWYVPREQWDEWLAYYGIEKTDSLLRRMKWYVVAQTILSIQWH
CCCCEEECCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
IAKKQQAEAEYWHQYLQQLLAE
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEWLEQLLGKEWSLIPAGGVTGDAYIAQNGQQKLFLKRNTSPFLAVLSAEGIVPKLLWTR
CCHHHHHHCCCCCEEECCCCCCCHHEECCCCEEEEEEECCCCEEEEEECCCCHHHHHHHH
RITNGDVISAQKWLSGKKLEPEDMKLERVAKLLKKIHSSKALVQMIQRLGKQPLHAQELL
CCCCCCEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHH
QQLYFVLRGDIKESQTIKAGLQYLKASLYDIEYDEFVVCHCDVNHNNWLLSDEDELFLID
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCCCEEEEE
WDGAVIADPALDLGMLLYWYVPREQWDEWLAYYGIEKTDSLLRRMKWYVVAQTILSIQWH
CCCCEEECCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
IAKKQQAEAEYWHQYLQQLLAE
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]