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The map label for this gene is yqjB [H]

Identifier: 152976556

GI number: 152976556

Start: 2918571

End: 2919080

Strand: Reverse

Name: yqjB [H]

Synonym: Bcer98_2845

Alternate gene names: 152976556

Gene position: 2919080-2918571 (Counterclockwise)

Preceding gene: 152976557

Following gene: 152976555

Centisome position: 71.42

GC content: 37.06

Gene sequence:

>510_bases
ATGCCATTTCTTATCTCGTTATTATTACTTTTTTCCCTTTCCCCCATTTGGCCCCTTGGTGATAATCCGCGAGTTGGTGA
TCCTTTCATTATTGTAAATAAAGAGAACAATAAACTTGCGTATATTAACGATGGGAAAATTCAAAATATGTTTCCTATTG
CAACTGGAAAAACAAATGAACTCACACCAGAGGGAACATTTGATATTGTGATGAAAGCAAAAAATCCTTACTATATTGCG
AAAAATATTCCAGGAGGATCACCAAAAAATCCACTTGGATCAAGGTGGATGGGATTTAATGCAAGAGGAACCGATGGAAG
CAAATATGGTATTCATGGTACAAATCAACCGAGTTCGATTGGGAAATATATTTCACAAGGATGTATTCGGATGAAGAAAC
ATGATGTGGAGTATTTATTTGATCGTGTTCCAATCGGAACAAAAGTATGGATTGTCAAATCGAAGAAATCCTTCTCGCAG
CTGGCGAAAGAAAAAGGAGCGATTCGCTAG

Upstream 100 bases:

>100_bases
TTCAACTCGTATATGAAATGGAACAATATTTACTCATTAAAAGCCGATTTAAAGGAAAGGATAATATAAAAGAACTTATA
TAAGGAGGCAGGAATTGCAT

Downstream 100 bases:

>100_bases
AGAGAGTCAATCATATAAGGTAAATGTTCTTTACATTTACCTTATATGATTAGCATGTGTGCATGTTCATGCGTTAATGA
AAATATATAAAGGTAGGAAG

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MPFLISLLLLFSLSPIWPLGDNPRVGDPFIIVNKENNKLAYINDGKIQNMFPIATGKTNELTPEGTFDIVMKAKNPYYIA
KNIPGGSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGKYISQGCIRMKKHDVEYLFDRVPIGTKVWIVKSKKSFSQ
LAKEKGAIR

Sequences:

>Translated_169_residues
MPFLISLLLLFSLSPIWPLGDNPRVGDPFIIVNKENNKLAYINDGKIQNMFPIATGKTNELTPEGTFDIVMKAKNPYYIA
KNIPGGSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGKYISQGCIRMKKHDVEYLFDRVPIGTKVWIVKSKKSFSQ
LAKEKGAIR
>Mature_168_residues
PFLISLLLLFSLSPIWPLGDNPRVGDPFIIVNKENNKLAYINDGKIQNMFPIATGKTNELTPEGTFDIVMKAKNPYYIAK
NIPGGSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGKYISQGCIRMKKHDVEYLFDRVPIGTKVWIVKSKKSFSQL
AKEKGAIR

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=148, Percent_Identity=31.7567567567568, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787968, Length=158, Percent_Identity=33.5443037974684, Blast_Score=63, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 18802; Mature: 18671

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFLISLLLLFSLSPIWPLGDNPRVGDPFIIVNKENNKLAYINDGKIQNMFPIATGKTNE
CHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCC
LTPEGTFDIVMKAKNPYYIAKNIPGGSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSI
CCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHH
GKYISQGCIRMKKHDVEYLFDRVPIGTKVWIVKSKKSFSQLAKEKGAIR
HHHHHHHHHHHHHHCHHHHHHCCCCCEEEEEEECCHHHHHHHHHCCCCC
>Mature Secondary Structure 
PFLISLLLLFSLSPIWPLGDNPRVGDPFIIVNKENNKLAYINDGKIQNMFPIATGKTNE
HHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCC
LTPEGTFDIVMKAKNPYYIAKNIPGGSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSI
CCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHH
GKYISQGCIRMKKHDVEYLFDRVPIGTKVWIVKSKKSFSQLAKEKGAIR
HHHHHHHHHHHHHHCHHHHHHCCCCCEEEEEEECCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]