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The map label for this gene is sdaAA [H]

Identifier: 152976545

GI number: 152976545

Start: 2909302

End: 2910174

Strand: Reverse

Name: sdaAA [H]

Synonym: Bcer98_2834

Alternate gene names: 152976545

Gene position: 2910174-2909302 (Counterclockwise)

Preceding gene: 152976546

Following gene: 152976543

Centisome position: 71.21

GC content: 44.56

Gene sequence:

>873_bases
ATGTTTCGGAATGCAGCGGAACTAGTGGCGCAAGCTAAAGAACAAAATGTAAAAATTGCAGAAATCATGATTCAATGTGA
AATGGAAACAAGAAGAATTTCTCGTGAAGAAGTAATCGCTGGAATGGAAAAGAATTTAGTAGTAATGGAGCAAGCAGTAG
AACGAGGAATTCGCGGTGTGAAATCACCAACTGGTTTAACAGGAGGTGATGCTGTGAAGGTACAAGAGTATATAAAGAGC
GGAAAAGGTCTATCGGGACATACGATTTTAGATGCAGTGAGCAAAGCTGTTGCAACAAATGAAGTCAATGCGGCGATGGG
AATTATTTGTGCAACACCAACAGCTGGGTCTGCTGGAACAGTTCCAGGTGTACTTTTTGCATTGAAAGAAAAGTTACAAC
CAACACGTGAAGAAATGATTGAATTTTTATTTACAGCAGGAGCATTTGGAATGGTTGTTGCGAATAATGCATGTATTTCA
GGTGCAGCTGGAGGGTGCCAAGCTGAAGTTGGATCGGCAAGTGGTATGGCAGCAGCGGCAGCTGTTGAAATGGCAGGCGG
GACACCAGAACAAGCTGCTACAGCAATGGCAATCGCCTTGAAAAATATGTTGGGATTAGTATGTGATCCTGTTGCCGGAC
TAGTAGAAGTGCCATGTGTAAAGCGGAATGCAGCAGGTGCTTCCAATGCGATGATTGCAGCGGACTTGTCATTGGCTGGT
GTGACAAGCATGATTCCGTGTGACGAAGTGATTGAAGCGATGTTTCGAATTGGCCAAACAATGCCAGTTGCACTTCGTGA
AACGGCCGAAGGTGGACTCGCAGCAACACCGACAGGACGCCGTTTACAAGAAGCGATTTTTGGAAAGAAATAA

Upstream 100 bases:

>100_bases
AACAGATGAGGCATTGGAAAATGAAGTGATTGAAGAGATAAAAGAACAATCTAATATTTGTCAAGTAACGATTATGGACT
AATTGCAGGGGGGACACACC

Downstream 100 bases:

>100_bases
TATAAGATAGAAAAGCGGAGCTCAAGTTTATTTTTAAGCTCCGCTTTTTCTTATTTTTTTGGTAGTTGATCCAGTGTTTT
ACCAAGGTCTTGCGATCGTC

Product: L-serine dehydratase, iron-sulfur-dependent, alpha subunit

Products: NA

Alternate protein names: SDH; L-serine deaminase; L-SD [H]

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MFRNAAELVAQAKEQNVKIAEIMIQCEMETRRISREEVIAGMEKNLVVMEQAVERGIRGVKSPTGLTGGDAVKVQEYIKS
GKGLSGHTILDAVSKAVATNEVNAAMGIICATPTAGSAGTVPGVLFALKEKLQPTREEMIEFLFTAGAFGMVVANNACIS
GAAGGCQAEVGSASGMAAAAAVEMAGGTPEQAATAMAIALKNMLGLVCDPVAGLVEVPCVKRNAAGASNAMIAADLSLAG
VTSMIPCDEVIEAMFRIGQTMPVALRETAEGGLAATPTGRRLQEAIFGKK

Sequences:

>Translated_290_residues
MFRNAAELVAQAKEQNVKIAEIMIQCEMETRRISREEVIAGMEKNLVVMEQAVERGIRGVKSPTGLTGGDAVKVQEYIKS
GKGLSGHTILDAVSKAVATNEVNAAMGIICATPTAGSAGTVPGVLFALKEKLQPTREEMIEFLFTAGAFGMVVANNACIS
GAAGGCQAEVGSASGMAAAAAVEMAGGTPEQAATAMAIALKNMLGLVCDPVAGLVEVPCVKRNAAGASNAMIAADLSLAG
VTSMIPCDEVIEAMFRIGQTMPVALRETAEGGLAATPTGRRLQEAIFGKK
>Mature_290_residues
MFRNAAELVAQAKEQNVKIAEIMIQCEMETRRISREEVIAGMEKNLVVMEQAVERGIRGVKSPTGLTGGDAVKVQEYIKS
GKGLSGHTILDAVSKAVATNEVNAAMGIICATPTAGSAGTVPGVLFALKEKLQPTREEMIEFLFTAGAFGMVVANNACIS
GAAGGCQAEVGSASGMAAAAAVEMAGGTPEQAATAMAIALKNMLGLVCDPVAGLVEVPCVKRNAAGASNAMIAADLSLAG
VTSMIPCDEVIEAMFRIGQTMPVALRETAEGGLAATPTGRRLQEAIFGKK

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: COG1760

COG function: function code E; L-serine deaminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron-sulfur dependent L-serine dehydratase family [H]

Homologues:

Organism=Escherichia coli, GI48994925, Length=280, Percent_Identity=36.4285714285714, Blast_Score=157, Evalue=6e-40,
Organism=Escherichia coli, GI1788116, Length=280, Percent_Identity=35.7142857142857, Blast_Score=148, Evalue=3e-37,
Organism=Escherichia coli, GI1789161, Length=284, Percent_Identity=34.8591549295775, Blast_Score=140, Evalue=8e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005130
- InterPro:   IPR004642 [H]

Pfam domain/function: PF03313 SDH_alpha [H]

EC number: =4.3.1.17 [H]

Molecular weight: Translated: 29773; Mature: 29773

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRNAAELVAQAKEQNVKIAEIMIQCEMETRRISREEVIAGMEKNLVVMEQAVERGIRGV
CCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHCC
KSPTGLTGGDAVKVQEYIKSGKGLSGHTILDAVSKAVATNEVNAAMGIICATPTAGSAGT
CCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCC
VPGVLFALKEKLQPTREEMIEFLFTAGAFGMVVANNACISGAAGGCQAEVGSASGMAAAA
HHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHEEECCCCCCCCCCCCCCCCCCCCCHHHHH
AVEMAGGTPEQAATAMAIALKNMLGLVCDPVAGLVEVPCVKRNAAGASNAMIAADLSLAG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHH
VTSMIPCDEVIEAMFRIGQTMPVALRETAEGGLAATPTGRRLQEAIFGKK
HHHCCCHHHHHHHHHHCCCCCCHHHHHHCCCCEEECCCHHHHHHHHCCCC
>Mature Secondary Structure
MFRNAAELVAQAKEQNVKIAEIMIQCEMETRRISREEVIAGMEKNLVVMEQAVERGIRGV
CCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHCC
KSPTGLTGGDAVKVQEYIKSGKGLSGHTILDAVSKAVATNEVNAAMGIICATPTAGSAGT
CCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCC
VPGVLFALKEKLQPTREEMIEFLFTAGAFGMVVANNACISGAAGGCQAEVGSASGMAAAA
HHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHEEECCCCCCCCCCCCCCCCCCCCCHHHHH
AVEMAGGTPEQAATAMAIALKNMLGLVCDPVAGLVEVPCVKRNAAGASNAMIAADLSLAG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHH
VTSMIPCDEVIEAMFRIGQTMPVALRETAEGGLAATPTGRRLQEAIFGKK
HHHCCCHHHHHHHHHHCCCCCCHHHHHHCCCCEEECCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]