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The map label for this gene is ykuI [H]

Identifier: 152976403

GI number: 152976403

Start: 2773835

End: 2775052

Strand: Reverse

Name: ykuI [H]

Synonym: Bcer98_2691

Alternate gene names: 152976403

Gene position: 2775052-2773835 (Counterclockwise)

Preceding gene: 152976404

Following gene: 152976402

Centisome position: 67.9

GC content: 31.12

Gene sequence:

>1218_bases
TTGATAGATGCATTAGATGTAATGAGTAATTTGGATAAAGTCCTTCCTTATTATCAAGCTATTTTTAGTGCTGATGAACA
TACAGTAGTTGGATATGAAGTAGTAGGACGTATCCAAACAGAAGAAGGGATACAAAGCCTGTCTTCTTTCTTTCATGATG
ATTCTGTTCCAAGTGAGTTTCAGCTTGAAGTAGATAATAATATTGTGGCAAAAGCTTTAAATCGATATTTAAAAACAGAT
CAATCTTTTTTATTGTTTATACACCGAAATGTAAATGTACTAATGAATGATGAGGAAGAAAGTTTACTACAGCTTTTATT
GATGTACGAAAAAAAAGGATTAAACTTAAGTAATATTGTTTTAGAAATAACGGAGCATGAGTGTAAGGAAGACATTGAAC
AATTTAATCATTTGTTAATGTATTATCGTACATATGGCATTCGAATTGCAATCAATAAAGTAGGGACAGGTATGAGTAAT
TTGGAACGAATTAGTGTGTTAGCACCTGATATTTTAAAAATAGATTTAACAAATTTAAGACAAACAGCCCTTTTACAATC
ATACCAAGATATTTTGTACTCTCTATCCCTACTTGCAAGAAGAATTGGTGCAACTTTATTATATGAAGAAATTGATGCGT
TTTACCAACTGCAATATGCATGGAAAAATGGAGGAAGATATTATCAAGGCGATTATTTGAAAGAGTGTTTGCCAGATTTT
ATTGAAGCAACTATTTTGAAAGAACGTCTTGGTAATGAGTGTCATCAATTTATTCAACAGGAAAAGAAGAAGTTACAAAA
GATTTATCAGCTCACCGAAACATTGCGTGAGCAAGTTGGAAATATTTTATTAAAGCAAAAAAAGAATGGAAATGTGAATG
AGTGGCTATTACATTTTAGTCAACATGTATCGCATTTTAGCTTCCGGATCTTTATCTGCAATGAAGATGGTTTTCAGCAA
TCAGGAAACGTTATGAAAAAAGATGAGGAATGGATTGTTATGCCTGAATATTATATGAAAAATTGGAGTTGGCGCCCATA
CTTTTTAGAAAATATAATGAAAATGCGATTTGAGAATAAAGCGAGACTTTCCGATTTATATGCAGATATTGAAACAGGAG
AAATGGTGCGAACATTTTCCTTTCCGATTGACGACGAACATTTCTTATTTATTGATTTATCGTATGAATTTTTATATGAA
GAAGATGTTTTATTTTAA

Upstream 100 bases:

>100_bases
TTACCCCTCTAATCCCTTCAGGAAAACTGAAGGGATTTTTTATTATTTTTCTATACATACCGTGTTATAATTTTTTGAAA
AGTAAAGGGAGGGAAGCAGT

Downstream 100 bases:

>100_bases
TGCACGAAGCAATTCGTGCATTTTTTGTTTGTTTTTATCATAAATTGGTAATAGTGAAAATGGTGATGAAAATGCTGTCT
ATCATTGTAAAGATTTTACG

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MIDALDVMSNLDKVLPYYQAIFSADEHTVVGYEVVGRIQTEEGIQSLSSFFHDDSVPSEFQLEVDNNIVAKALNRYLKTD
QSFLLFIHRNVNVLMNDEEESLLQLLLMYEKKGLNLSNIVLEITEHECKEDIEQFNHLLMYYRTYGIRIAINKVGTGMSN
LERISVLAPDILKIDLTNLRQTALLQSYQDILYSLSLLARRIGATLLYEEIDAFYQLQYAWKNGGRYYQGDYLKECLPDF
IEATILKERLGNECHQFIQQEKKKLQKIYQLTETLREQVGNILLKQKKNGNVNEWLLHFSQHVSHFSFRIFICNEDGFQQ
SGNVMKKDEEWIVMPEYYMKNWSWRPYFLENIMKMRFENKARLSDLYADIETGEMVRTFSFPIDDEHFLFIDLSYEFLYE
EDVLF

Sequences:

>Translated_405_residues
MIDALDVMSNLDKVLPYYQAIFSADEHTVVGYEVVGRIQTEEGIQSLSSFFHDDSVPSEFQLEVDNNIVAKALNRYLKTD
QSFLLFIHRNVNVLMNDEEESLLQLLLMYEKKGLNLSNIVLEITEHECKEDIEQFNHLLMYYRTYGIRIAINKVGTGMSN
LERISVLAPDILKIDLTNLRQTALLQSYQDILYSLSLLARRIGATLLYEEIDAFYQLQYAWKNGGRYYQGDYLKECLPDF
IEATILKERLGNECHQFIQQEKKKLQKIYQLTETLREQVGNILLKQKKNGNVNEWLLHFSQHVSHFSFRIFICNEDGFQQ
SGNVMKKDEEWIVMPEYYMKNWSWRPYFLENIMKMRFENKARLSDLYADIETGEMVRTFSFPIDDEHFLFIDLSYEFLYE
EDVLF
>Mature_405_residues
MIDALDVMSNLDKVLPYYQAIFSADEHTVVGYEVVGRIQTEEGIQSLSSFFHDDSVPSEFQLEVDNNIVAKALNRYLKTD
QSFLLFIHRNVNVLMNDEEESLLQLLLMYEKKGLNLSNIVLEITEHECKEDIEQFNHLLMYYRTYGIRIAINKVGTGMSN
LERISVLAPDILKIDLTNLRQTALLQSYQDILYSLSLLARRIGATLLYEEIDAFYQLQYAWKNGGRYYQGDYLKECLPDF
IEATILKERLGNECHQFIQQEKKKLQKIYQLTETLREQVGNILLKQKKNGNVNEWLLHFSQHVSHFSFRIFICNEDGFQQ
SGNVMKKDEEWIVMPEYYMKNWSWRPYFLENIMKMRFENKARLSDLYADIETGEMVRTFSFPIDDEHFLFIDLSYEFLYE
EDVLF

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633
- InterPro:   IPR018842 [H]

Pfam domain/function: PF00563 EAL; PF10388 YkuI_C [H]

EC number: NA

Molecular weight: Translated: 47898; Mature: 47898

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDALDVMSNLDKVLPYYQAIFSADEHTVVGYEVVGRIQTEEGIQSLSSFFHDDSVPSEF
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
QLEVDNNIVAKALNRYLKTDQSFLLFIHRNVNVLMNDEEESLLQLLLMYEKKGLNLSNIV
EEEECCHHHHHHHHHHHCCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHCCCCHHHHH
LEITEHECKEDIEQFNHLLMYYRTYGIRIAINKVGTGMSNLERISVLAPDILKIDLTNLR
EEHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHCCCCEEEEHHHHH
QTALLQSYQDILYSLSLLARRIGATLLYEEIDAFYQLQYAWKNGGRYYQGDYLKECLPDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHH
IEATILKERLGNECHQFIQQEKKKLQKIYQLTETLREQVGNILLKQKKNGNVNEWLLHFS
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
QHVSHFSFRIFICNEDGFQQSGNVMKKDEEWIVMPEYYMKNWSWRPYFLENIMKMRFENK
HHHCCEEEEEEEECCCCCCCCCCCCCCCCCEEEECHHHHCCCCCCHHHHHHHHHHHHCCH
ARLSDLYADIETGEMVRTFSFPIDDEHFLFIDLSYEFLYEEDVLF
HHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEEHHHCCCCCCC
>Mature Secondary Structure
MIDALDVMSNLDKVLPYYQAIFSADEHTVVGYEVVGRIQTEEGIQSLSSFFHDDSVPSEF
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
QLEVDNNIVAKALNRYLKTDQSFLLFIHRNVNVLMNDEEESLLQLLLMYEKKGLNLSNIV
EEEECCHHHHHHHHHHHCCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHCCCCHHHHH
LEITEHECKEDIEQFNHLLMYYRTYGIRIAINKVGTGMSNLERISVLAPDILKIDLTNLR
EEHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHCCCCEEEEHHHHH
QTALLQSYQDILYSLSLLARRIGATLLYEEIDAFYQLQYAWKNGGRYYQGDYLKECLPDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHH
IEATILKERLGNECHQFIQQEKKKLQKIYQLTETLREQVGNILLKQKKNGNVNEWLLHFS
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
QHVSHFSFRIFICNEDGFQQSGNVMKKDEEWIVMPEYYMKNWSWRPYFLENIMKMRFENK
HHHCCEEEEEEEECCCCCCCCCCCCCCCCCEEEECHHHHCCCCCCHHHHHHHHHHHHCCH
ARLSDLYADIETGEMVRTFSFPIDDEHFLFIDLSYEFLYEEDVLF
HHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEEHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]