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The map label for this gene is ctaD [H]

Identifier: 152976357

GI number: 152976357

Start: 2730974

End: 2732836

Strand: Reverse

Name: ctaD [H]

Synonym: Bcer98_2645

Alternate gene names: 152976357

Gene position: 2732836-2730974 (Counterclockwise)

Preceding gene: 152976358

Following gene: 152976356

Centisome position: 66.87

GC content: 39.45

Gene sequence:

>1863_bases
GTGAGTTCTGTAGCAAAAAAACAGGGGATGGGTGCTGTTATATGGGATTATTTAACGACAGTAGACCATAAAAAAATTGC
CATTCTCTATTTAATTGCAGGTGGATTATTTTTTATCATCGGCGGAATAGAAGCACTATTTATCCGTCTACAACTAGCAA
TTCCAAACAATGCTTTTCTTGTTGGAGATGCTTATAATCAAGTATTAACAATGCACGGTACAACAATGATTTTCCTCGCA
GCTATGCCGCTTGTGTTTGCATTTATGAATGCTGCTGTGCCGCTTCAAATTGGAGCGCGTGATGTAGCATTTCCATTTTT
AAACTCACTTGGATTTTGGTTATTTTTCTTTGGAGGCGTATTTTTAAACTTAAGTTGGTTTTTAGGAGGAGCTCCCGATG
CAGGGTGGACATCGTATGCATCGTTATCGCTAGCTTCGAAAGGACATGGTATTGATTTTTATGTATTGGGATTGCAAATA
TCAGGTCTCGGTACGCTAATTGGTGGTATTAATTTTCTTGTTACTATTATTAATATGCGTGCACCAGGAATGACGTATAT
GCGAATGCCGATGTTTACATGGACAACATTTGTCACATCTTCACTGATTTTATTCGCTTTCCCACCGTTAACAGTTGGAT
TAGGATTACTTATGTTAGATCGTTTATTTGGTACAAGTTTTTTCAACCCAGCTTTGGGCGGGAATACGATTATATGGGAG
CACTTATTCTGGATCTTTGGGCACCCAGAAGTGTACATTCTTATACTTCCAGCTTTCGGAATATTCTCAGAAATCTTCGC
GACCTTTTCCAAAAAACGATTATTCGGATATTCATCGATGGTATTTGCAACAGTCTTAATTGGATTTTTAGGATTTATGG
TATGGGCGCACCATATGTTTACAGTTGGTCTCGGCCCTGTTGCTAATGCTATCTTTTCTGTCGCGACGATGGCAATTGCA
GTACCGACGGGAATTAAAATTTTTAACTGGCTCTTTACAATGTGGGGAGGAAGTATTCGTTTTACAACACCGATGATGTG
GGCTGTTGGTTTTATTCCATCATTTGTAATGGGCGGTGTAACAGGGGTTATGCTTGCTTCTGCGCCAGCTGATTATCAGT
TCCATGATAACTATTTCGTTGTAGCGCATTTTCACTACGTAATCGTTGGAGGCGTTGTGTTTGGTTTATTGGCAGGAGCG
CATTATTATTGGCCTCTTATGTTTAACAAAGTATTGAATGAAGCATTGGGGAAAGTTACATTTTGGTTATTCTTTATCGG
TTTCCATTTAACGTTCTTTATTCAACATTTCCTTGGGTTAATTGGTATGCCGCGCCGTTATTACACGTATTTACCAGGTC
AAGGATTAGAAATGGGGAACTTAATTAGTTCGGTTGGATCTGCGTTTATGGGACTTGGAACAATAGTTCTTTTATATAAC
ATTGTGAAAACGACAGTGTCTAAAGAACAAGCAGGGCGTGACCCATGGGATGGTCGCACGCTAGAGTGGACAATGCCTGC
TCCTACGCCAGAATATAACTTTAAGCAACTACCGTTTGTCCGTGGATTAGATCCTTTTTGGATTGAGAAACGTGATGGGA
ATAAAGCGATGACACCAGCAGAGCCTATTGGTAACATTCATATGCCAAACGCTTCATTTTCACCATTTGTCATATCGCTT
GGCTTATTTATAGCAGCATTTGGCGCAATGTATATGCAAGGTGGAAAAGATAAGTTTTGGCTCTTGGTAGCAATTATTGG
GCTTATCATTACATTTGGTACAATGTTCTTCCGATCTATAATTGATGATCATGGTTATCATATTCATAAAGAAGACTTGG
ATGATAAGGGAGGCACGGCATAA

Upstream 100 bases:

>100_bases
ATTTAACGGATGCCCAAGTTGATGCATTAAATGCATATTTGAAGACGTTAAAAGTTGAGAAATAATAGGGATTATTATTT
GCGAAGGGGAGGTTGAAGAC

Downstream 100 bases:

>100_bases
TGCATGTAGAGGGAAAATTAACGAATGAAACATTTCCAGCAGAGCCTGAAAAAGCAACCCTCGAAGGAAAAAATAAGTTT
GTCGGATTTTGGCTGTTCCT

Product: cytochrome c oxidase subunit I type

Products: NA

Alternate protein names: Caa-3605 subunit 1; Cytochrome aa3 subunit 1; Cytochrome c oxidase polypeptide I; Oxidase aa(3) subunit 1 [H]

Number of amino acids: Translated: 620; Mature: 619

Protein sequence:

>620_residues
MSSVAKKQGMGAVIWDYLTTVDHKKIAILYLIAGGLFFIIGGIEALFIRLQLAIPNNAFLVGDAYNQVLTMHGTTMIFLA
AMPLVFAFMNAAVPLQIGARDVAFPFLNSLGFWLFFFGGVFLNLSWFLGGAPDAGWTSYASLSLASKGHGIDFYVLGLQI
SGLGTLIGGINFLVTIINMRAPGMTYMRMPMFTWTTFVTSSLILFAFPPLTVGLGLLMLDRLFGTSFFNPALGGNTIIWE
HLFWIFGHPEVYILILPAFGIFSEIFATFSKKRLFGYSSMVFATVLIGFLGFMVWAHHMFTVGLGPVANAIFSVATMAIA
VPTGIKIFNWLFTMWGGSIRFTTPMMWAVGFIPSFVMGGVTGVMLASAPADYQFHDNYFVVAHFHYVIVGGVVFGLLAGA
HYYWPLMFNKVLNEALGKVTFWLFFIGFHLTFFIQHFLGLIGMPRRYYTYLPGQGLEMGNLISSVGSAFMGLGTIVLLYN
IVKTTVSKEQAGRDPWDGRTLEWTMPAPTPEYNFKQLPFVRGLDPFWIEKRDGNKAMTPAEPIGNIHMPNASFSPFVISL
GLFIAAFGAMYMQGGKDKFWLLVAIIGLIITFGTMFFRSIIDDHGYHIHKEDLDDKGGTA

Sequences:

>Translated_620_residues
MSSVAKKQGMGAVIWDYLTTVDHKKIAILYLIAGGLFFIIGGIEALFIRLQLAIPNNAFLVGDAYNQVLTMHGTTMIFLA
AMPLVFAFMNAAVPLQIGARDVAFPFLNSLGFWLFFFGGVFLNLSWFLGGAPDAGWTSYASLSLASKGHGIDFYVLGLQI
SGLGTLIGGINFLVTIINMRAPGMTYMRMPMFTWTTFVTSSLILFAFPPLTVGLGLLMLDRLFGTSFFNPALGGNTIIWE
HLFWIFGHPEVYILILPAFGIFSEIFATFSKKRLFGYSSMVFATVLIGFLGFMVWAHHMFTVGLGPVANAIFSVATMAIA
VPTGIKIFNWLFTMWGGSIRFTTPMMWAVGFIPSFVMGGVTGVMLASAPADYQFHDNYFVVAHFHYVIVGGVVFGLLAGA
HYYWPLMFNKVLNEALGKVTFWLFFIGFHLTFFIQHFLGLIGMPRRYYTYLPGQGLEMGNLISSVGSAFMGLGTIVLLYN
IVKTTVSKEQAGRDPWDGRTLEWTMPAPTPEYNFKQLPFVRGLDPFWIEKRDGNKAMTPAEPIGNIHMPNASFSPFVISL
GLFIAAFGAMYMQGGKDKFWLLVAIIGLIITFGTMFFRSIIDDHGYHIHKEDLDDKGGTA
>Mature_619_residues
SSVAKKQGMGAVIWDYLTTVDHKKIAILYLIAGGLFFIIGGIEALFIRLQLAIPNNAFLVGDAYNQVLTMHGTTMIFLAA
MPLVFAFMNAAVPLQIGARDVAFPFLNSLGFWLFFFGGVFLNLSWFLGGAPDAGWTSYASLSLASKGHGIDFYVLGLQIS
GLGTLIGGINFLVTIINMRAPGMTYMRMPMFTWTTFVTSSLILFAFPPLTVGLGLLMLDRLFGTSFFNPALGGNTIIWEH
LFWIFGHPEVYILILPAFGIFSEIFATFSKKRLFGYSSMVFATVLIGFLGFMVWAHHMFTVGLGPVANAIFSVATMAIAV
PTGIKIFNWLFTMWGGSIRFTTPMMWAVGFIPSFVMGGVTGVMLASAPADYQFHDNYFVVAHFHYVIVGGVVFGLLAGAH
YYWPLMFNKVLNEALGKVTFWLFFIGFHLTFFIQHFLGLIGMPRRYYTYLPGQGLEMGNLISSVGSAFMGLGTIVLLYNI
VKTTVSKEQAGRDPWDGRTLEWTMPAPTPEYNFKQLPFVRGLDPFWIEKRDGNKAMTPAEPIGNIHMPNASFSPFVISLG
LFIAAFGAMYMQGGKDKFWLLVAIIGLIITFGTMFFRSIIDDHGYHIHKEDLDDKGGTA

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG0843

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

Organism=Homo sapiens, GI251831109, Length=509, Percent_Identity=41.6502946954813, Blast_Score=373, Evalue=1e-103,
Organism=Escherichia coli, GI1786634, Length=608, Percent_Identity=44.9013157894737, Blast_Score=496, Evalue=1e-141,
Organism=Saccharomyces cerevisiae, GI6226519, Length=472, Percent_Identity=45.1271186440678, Blast_Score=379, Evalue=1e-106,
Organism=Saccharomyces cerevisiae, GI6226524, Length=324, Percent_Identity=45.0617283950617, Blast_Score=262, Evalue=9e-71,
Organism=Saccharomyces cerevisiae, GI6226523, Length=265, Percent_Identity=36.2264150943396, Blast_Score=149, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000883
- InterPro:   IPR014241 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 68636; Mature: 68505

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVAKKQGMGAVIWDYLTTVDHKKIAILYLIAGGLFFIIGGIEALFIRLQLAIPNNAFL
CCCCHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEE
VGDAYNQVLTMHGTTMIFLAAMPLVFAFMNAAVPLQIGARDVAFPFLNSLGFWLFFFGGV
EECHHHHEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHH
FLNLSWFLGGAPDAGWTSYASLSLASKGHGIDFYVLGLQISGLGTLIGGINFLVTIINMR
HHHHHHHCCCCCCCCCHHHHHEEECCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHCC
APGMTYMRMPMFTWTTFVTSSLILFAFPPLTVGLGLLMLDRLFGTSFFNPALGGNTIIWE
CCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHH
HLFWIFGHPEVYILILPAFGIFSEIFATFSKKRLFGYSSMVFATVLIGFLGFMVWAHHMF
HHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
TVGLGPVANAIFSVATMAIAVPTGIKIFNWLFTMWGGSIRFTTPMMWAVGFIPSFVMGGV
HHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHCCH
TGVMLASAPADYQFHDNYFVVAHFHYVIVGGVVFGLLAGAHYYWPLMFNKVLNEALGKVT
HHHHHCCCCCCCEECCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
FWLFFIGFHLTFFIQHFLGLIGMPRRYYTYLPGQGLEMGNLISSVGSAFMGLGTIVLLYN
HHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IVKTTVSKEQAGRDPWDGRTLEWTMPAPTPEYNFKQLPFVRGLDPFWIEKRDGNKAMTPA
HHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCEEEECCCCCCCCCC
EPIGNIHMPNASFSPFVISLGLFIAAFGAMYMQGGKDKFWLLVAIIGLIITFGTMFFRSI
CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IDDHGYHIHKEDLDDKGGTA
HHCCCCEEECCCCCCCCCCC
>Mature Secondary Structure 
SSVAKKQGMGAVIWDYLTTVDHKKIAILYLIAGGLFFIIGGIEALFIRLQLAIPNNAFL
CCCHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEE
VGDAYNQVLTMHGTTMIFLAAMPLVFAFMNAAVPLQIGARDVAFPFLNSLGFWLFFFGGV
EECHHHHEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHH
FLNLSWFLGGAPDAGWTSYASLSLASKGHGIDFYVLGLQISGLGTLIGGINFLVTIINMR
HHHHHHHCCCCCCCCCHHHHHEEECCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHCC
APGMTYMRMPMFTWTTFVTSSLILFAFPPLTVGLGLLMLDRLFGTSFFNPALGGNTIIWE
CCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHH
HLFWIFGHPEVYILILPAFGIFSEIFATFSKKRLFGYSSMVFATVLIGFLGFMVWAHHMF
HHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
TVGLGPVANAIFSVATMAIAVPTGIKIFNWLFTMWGGSIRFTTPMMWAVGFIPSFVMGGV
HHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHCCH
TGVMLASAPADYQFHDNYFVVAHFHYVIVGGVVFGLLAGAHYYWPLMFNKVLNEALGKVT
HHHHHCCCCCCCEECCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
FWLFFIGFHLTFFIQHFLGLIGMPRRYYTYLPGQGLEMGNLISSVGSAFMGLGTIVLLYN
HHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IVKTTVSKEQAGRDPWDGRTLEWTMPAPTPEYNFKQLPFVRGLDPFWIEKRDGNKAMTPA
HHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCEEEECCCCCCCCCC
EPIGNIHMPNASFSPFVISLGLFIAAFGAMYMQGGKDKFWLLVAIIGLIITFGTMFFRSI
CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IDDHGYHIHKEDLDDKGGTA
HHCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1847686; 9384377 [H]