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The map label for this gene is ylbK [H]

Identifier: 152976342

GI number: 152976342

Start: 2720518

End: 2721309

Strand: Reverse

Name: ylbK [H]

Synonym: Bcer98_2630

Alternate gene names: 152976342

Gene position: 2721309-2720518 (Counterclockwise)

Preceding gene: 152976344

Following gene: 152976341

Centisome position: 66.58

GC content: 34.47

Gene sequence:

>792_bases
ATGCGAGAACCGAAAATAGGCTTGGCTCTTGGCTCTGGTGGGGCAAAAGGATTTGCTCATGTAGGGATTATTAAGATATT
ACGTGAGTCTAATATTCCTATTGACATGATAGCAGGAAGTAGTATGGGGGCGCTAATTGGAACATTTTATGCTACAAATT
GTAATGTTGAAAGACTTTATCGAATGGCCTCAGTATTTAAGAGGAAATATTATTTAGATTTTACTGTGCCGAAAATGGGA
TTTATTTCTGGAAAACGTGTAAAAGATATGATTAAAATGTTTACATATAACAAAAAAATGGAAGAGTTAGAAATTCCAAC
TGCAGTTGTAGCCACTGACATTTTAAAGGGAGAAAAAGTTGTATTTACAAAAGGGTCTATTGCTGATGCTGTTAGGGCGA
GTATTTCTGTACCAGGAGTGTTTGTTCCTGAAAAAATAGATGGGCGCTTATTAGTGGATGGAGGGGTAATTGATCGGATT
CCTGTATCCGTCGTCAAGGATTTAGGAGCTGATATTGTAATTGCTGTAGATGTATCCCCTATTAAAGTAAATGGTGAAAT
TAATTCTATTTATGACGTAATTATGCAAAGTATTGAAATTATGCAGTATGAACTTGTTGTTAATCGACAAACTGCATCGG
ATTTAATGATGCGTCCAACAGTAGAACAGTTTAGTTCTCGTGCTTTTACAAATATTGAAGAAATTATTCGAGTAGGAGAA
GAAGAAGCAAAGAAACATATTCAAGATATTTATTTATTAATTGAGCAGTGGAAGGAGAAAAATAATGTTTAA

Upstream 100 bases:

>100_bases
CCTTTGTCCCAAAAAACGTTCATTTCAGTATACGTGGATACATAGTAAATTTAGACCATAAGTATGAAAAAGGAGTAAAA
AAAGTTTAAGGGTGATTCAT

Downstream 100 bases:

>100_bases
GCGTTTTCGGTTTATATATGCGATTTTAATTGGAGTTATATTGGCGATGCTACTTGTATATATTCGTCTACCTTACTATA
TAACAAAACCAGGAATGGCT

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MREPKIGLALGSGGAKGFAHVGIIKILRESNIPIDMIAGSSMGALIGTFYATNCNVERLYRMASVFKRKYYLDFTVPKMG
FISGKRVKDMIKMFTYNKKMEELEIPTAVVATDILKGEKVVFTKGSIADAVRASISVPGVFVPEKIDGRLLVDGGVIDRI
PVSVVKDLGADIVIAVDVSPIKVNGEINSIYDVIMQSIEIMQYELVVNRQTASDLMMRPTVEQFSSRAFTNIEEIIRVGE
EEAKKHIQDIYLLIEQWKEKNNV

Sequences:

>Translated_263_residues
MREPKIGLALGSGGAKGFAHVGIIKILRESNIPIDMIAGSSMGALIGTFYATNCNVERLYRMASVFKRKYYLDFTVPKMG
FISGKRVKDMIKMFTYNKKMEELEIPTAVVATDILKGEKVVFTKGSIADAVRASISVPGVFVPEKIDGRLLVDGGVIDRI
PVSVVKDLGADIVIAVDVSPIKVNGEINSIYDVIMQSIEIMQYELVVNRQTASDLMMRPTVEQFSSRAFTNIEEIIRVGE
EEAKKHIQDIYLLIEQWKEKNNV
>Mature_263_residues
MREPKIGLALGSGGAKGFAHVGIIKILRESNIPIDMIAGSSMGALIGTFYATNCNVERLYRMASVFKRKYYLDFTVPKMG
FISGKRVKDMIKMFTYNKKMEELEIPTAVVATDILKGEKVVFTKGSIADAVRASISVPGVFVPEKIDGRLLVDGGVIDRI
PVSVVKDLGADIVIAVDVSPIKVNGEINSIYDVIMQSIEIMQYELVVNRQTASDLMMRPTVEQFSSRAFTNIEEIIRVGE
EEAKKHIQDIYLLIEQWKEKNNV

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI148727335, Length=181, Percent_Identity=38.121546961326, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI148727290, Length=181, Percent_Identity=38.121546961326, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI260656043, Length=181, Percent_Identity=34.8066298342541, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI260656041, Length=181, Percent_Identity=34.8066298342541, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI260656039, Length=181, Percent_Identity=34.8066298342541, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI260656037, Length=181, Percent_Identity=34.8066298342541, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI116256487, Length=181, Percent_Identity=34.8066298342541, Blast_Score=117, Evalue=1e-26,
Organism=Escherichia coli, GI226510936, Length=297, Percent_Identity=28.956228956229, Blast_Score=137, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI71997299, Length=268, Percent_Identity=27.9850746268657, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71997289, Length=268, Percent_Identity=27.9850746268657, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI193204778, Length=164, Percent_Identity=29.2682926829268, Blast_Score=90, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6323581, Length=279, Percent_Identity=26.1648745519713, Blast_Score=115, Evalue=1e-26,
Organism=Drosophila melanogaster, GI28571388, Length=282, Percent_Identity=29.7872340425532, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI281376913, Length=282, Percent_Identity=29.7872340425532, Blast_Score=108, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 29239; Mature: 29239

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREPKIGLALGSGGAKGFAHVGIIKILRESNIPIDMIAGSSMGALIGTFYATNCNVERLY
CCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCHHHHH
RMASVFKRKYYLDFTVPKMGFISGKRVKDMIKMFTYNKKMEELEIPTAVVATDILKGEKV
HHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHCCCEE
VFTKGSIADAVRASISVPGVFVPEKIDGRLLVDGGVIDRIPVSVVKDLGADIVIAVDVSP
EEECCCHHHHHHHHCCCCCEECCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCE
IKVNGEINSIYDVIMQSIEIMQYELVVNRQTASDLMMRPTVEQFSSRAFTNIEEIIRVGE
EEECCCHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHCCCHHHHHHHHHCCHHHHHHCCH
EEAKKHIQDIYLLIEQWKEKNNV
HHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MREPKIGLALGSGGAKGFAHVGIIKILRESNIPIDMIAGSSMGALIGTFYATNCNVERLY
CCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCHHHHH
RMASVFKRKYYLDFTVPKMGFISGKRVKDMIKMFTYNKKMEELEIPTAVVATDILKGEKV
HHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHCCCEE
VFTKGSIADAVRASISVPGVFVPEKIDGRLLVDGGVIDRIPVSVVKDLGADIVIAVDVSP
EEECCCHHHHHHHHCCCCCEECCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCE
IKVNGEINSIYDVIMQSIEIMQYELVVNRQTASDLMMRPTVEQFSSRAFTNIEEIIRVGE
EEECCCHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHCCCHHHHHHHHHCCHHHHHHCCH
EEAKKHIQDIYLLIEQWKEKNNV
HHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]