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The map label for this gene is ylmD [H]

Identifier: 152976262

GI number: 152976262

Start: 2650353

End: 2651162

Strand: Reverse

Name: ylmD [H]

Synonym: Bcer98_2550

Alternate gene names: 152976262

Gene position: 2651162-2650353 (Counterclockwise)

Preceding gene: 152976263

Following gene: 152976261

Centisome position: 64.87

GC content: 37.16

Gene sequence:

>810_bases
ATGAGAGAACCATTTAAATATGTGGACGGTATATTGTATTTACAAGCATGGGAAGATCTTGGGAACATTACTGCTGGCTT
TACAACAAAAGATGGTGGAGTAAGTACAGGCTCCTTTCATGCGATGAATTTAGGATTACATGTGAATGATATCATTGAGA
ATGTTCATGAAAATAGACGTATTTTAGCAAATAAGTTACATCAGCCATTAGAAAATTGGATTTGTTCAGAACAGGTTCAT
AATCATCATGTAGAAAAAGTGGGACATGAAGAAAAAGGGCGCGGAGTTTATGTATATGAAGATGGAATTCCAAAGACGGA
TGGTATCTATACAGCTGATAAAGATGTATGTTTAATATCTTGTTATGCTGATTGTGTGCCTCTCTTTTTCTATGCACCTT
CACATGGTTTAATAGGTCTTGCGCATGCCGGATGGAAAGGCACTGTGAAAGAAATTGCGAATGAAATGATTCAAAAGTGG
AAAGCTGAGGGCGTTTCTACTACTGACATTCATGTTGCAATTGGACCTGCGATTGGAGCATGTTGCTATGTTGTAGACGA
TCGTGTTTTATCAGCAGCAAAACAAATTATAAATGGATCTGTTCCTTATAAAGTCATTTCAGCTGGACAATACGCGATTG
ATTTAAAAGAGATAGATCGTATAGTATGCTTACAAGCTGGCATAAAAGAAGAACATATTGTGATGTCATCTCTTTGTACA
AGCTGTGAAGAACAATTATTTTTCTCGCATCGCCGCGACCAAGGAAAGACAGGAAGAATGTTGAGTTTCATAGGTTTTAA
GGAGGATTGA

Upstream 100 bases:

>100_bases
TCTTTTTTTTATATTGTCATTATGGAAAAATAAAAGTATGGTAAAATAGACAGGAAGTACCATGATTTTTAAGCTATTTT
AATGAAGAAGGAGCCGCTTT

Downstream 100 bases:

>100_bases
AAAACAGTGACAGTACAAGAGAATTTAGCAGTGATACAGGAAGAAATGAAACAAGCATGTGAGCGAGCTGGACGCTCCAT
CCATGATGTGAAACTTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MREPFKYVDGILYLQAWEDLGNITAGFTTKDGGVSTGSFHAMNLGLHVNDIIENVHENRRILANKLHQPLENWICSEQVH
NHHVEKVGHEEKGRGVYVYEDGIPKTDGIYTADKDVCLISCYADCVPLFFYAPSHGLIGLAHAGWKGTVKEIANEMIQKW
KAEGVSTTDIHVAIGPAIGACCYVVDDRVLSAAKQIINGSVPYKVISAGQYAIDLKEIDRIVCLQAGIKEEHIVMSSLCT
SCEEQLFFSHRRDQGKTGRMLSFIGFKED

Sequences:

>Translated_269_residues
MREPFKYVDGILYLQAWEDLGNITAGFTTKDGGVSTGSFHAMNLGLHVNDIIENVHENRRILANKLHQPLENWICSEQVH
NHHVEKVGHEEKGRGVYVYEDGIPKTDGIYTADKDVCLISCYADCVPLFFYAPSHGLIGLAHAGWKGTVKEIANEMIQKW
KAEGVSTTDIHVAIGPAIGACCYVVDDRVLSAAKQIINGSVPYKVISAGQYAIDLKEIDRIVCLQAGIKEEHIVMSSLCT
SCEEQLFFSHRRDQGKTGRMLSFIGFKED
>Mature_269_residues
MREPFKYVDGILYLQAWEDLGNITAGFTTKDGGVSTGSFHAMNLGLHVNDIIENVHENRRILANKLHQPLENWICSEQVH
NHHVEKVGHEEKGRGVYVYEDGIPKTDGIYTADKDVCLISCYADCVPLFFYAPSHGLIGLAHAGWKGTVKEIANEMIQKW
KAEGVSTTDIHVAIGPAIGACCYVVDDRVLSAAKQIINGSVPYKVISAGQYAIDLKEIDRIVCLQAGIKEEHIVMSSLCT
SCEEQLFFSHRRDQGKTGRMLSFIGFKED

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=251, Percent_Identity=31.8725099601594, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI190194372, Length=251, Percent_Identity=31.8725099601594, Blast_Score=107, Evalue=1e-23,
Organism=Escherichia coli, GI1788945, Length=256, Percent_Identity=28.90625, Blast_Score=94, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 29882; Mature: 29882

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREPFKYVDGILYLQAWEDLGNITAGFTTKDGGVSTGSFHAMNLGLHVNDIIENVHENRR
CCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHH
ILANKLHQPLENWICSEQVHNHHVEKVGHEEKGRGVYVYEDGIPKTDGIYTADKDVCLIS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEECCCCEEEEE
CYADCVPLFFYAPSHGLIGLAHAGWKGTVKEIANEMIQKWKAEGVSTTDIHVAIGPAIGA
EHHHHHHHHEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHH
CCYVVDDRVLSAAKQIINGSVPYKVISAGQYAIDLKEIDRIVCLQAGIKEEHIVMSSLCT
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHH
SCEEQLFFSHRRDQGKTGRMLSFIGFKED
HHHHHHHHHHCCCCCCCCCEEEECCCCCC
>Mature Secondary Structure
MREPFKYVDGILYLQAWEDLGNITAGFTTKDGGVSTGSFHAMNLGLHVNDIIENVHENRR
CCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHH
ILANKLHQPLENWICSEQVHNHHVEKVGHEEKGRGVYVYEDGIPKTDGIYTADKDVCLIS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEECCCCEEEEE
CYADCVPLFFYAPSHGLIGLAHAGWKGTVKEIANEMIQKWKAEGVSTTDIHVAIGPAIGA
EHHHHHHHHEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHH
CCYVVDDRVLSAAKQIINGSVPYKVISAGQYAIDLKEIDRIVCLQAGIKEEHIVMSSLCT
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHH
SCEEQLFFSHRRDQGKTGRMLSFIGFKED
HHHHHHHHHHCCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]