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The map label for this gene is yocH [H]

Identifier: 152976109

GI number: 152976109

Start: 2479370

End: 2480263

Strand: Reverse

Name: yocH [H]

Synonym: Bcer98_2393

Alternate gene names: 152976109

Gene position: 2480263-2479370 (Counterclockwise)

Preceding gene: 152976110

Following gene: 152976107

Centisome position: 60.69

GC content: 38.14

Gene sequence:

>894_bases
ATGAAAAAAATAGTTGGTATAGCAATAGCGGCGTTTTTTGGTTTTGGAATTTATGATTCTTCGGCTAAAGCGGAAACAGT
TGTAACAACAGATGTACTCAATGTACGAGAAGAACCAACTGTGGAATCAACAGTTGTAGGAAAAGTGTTAAAAGGTCATG
AACTACATGTTGTAAATACAGAAAATGGATGGTCACAAATTAAATGGAATGGTAAGGATGTATTCGTAAGCGCAGCGTTT
ACGAAAAATATGTATTATGTAACTGCAAATGCATTGAACGTACGTGCAGGAATGAGTGCGAGTTCAGAAATTCTCGGTAC
GCTAAAGAAAGATGATTTGATTGAAACAACGAATCAAATACAAAATGGTTGGCTACAATTTCATTATAATGGAAAAACAG
CTTATGTTTATGCTTCTTTCTTAACAGAAAAAGCGCCTGTAAAAGTTGTAACACCTGTAAAGGAAAAAGCACCAGTAAAA
CAAGTGCAAACAAAGGCGCAAGTCGTACAATCAAAACCGGTAGTACAAGAAAAAAAGCAGACACAGGTAGTGCAATCAAA
ACCGAAAACTACAAGTGAACCTTCAGGTGGACGTGAACTAACGGTTGAAGCTACAGCATATACAGCTCATCCAAGTGAAA
ATGGTACATATGGCGGTCGAGTATTAACAGCAATGGGTCATGATTTAACAGCCAATCCGAATATGAAAGTGATTGCTGTT
GATCCGAATGTGATTCCGTTAGGATCAAAAGTGTGGGTAGAAGGGTATGGAGAAGCGATTGCTGGTGATACTGGCGGTGC
AATTAAAGGTAACCGTATTGATGTGTTAGTTGGCTCTGATGGAACTGCTAACCAATGGGGACGTAAGCATGTGAAAGTGA
AAATTATAAAATAG

Upstream 100 bases:

>100_bases
ATAATTTGTTACGAATCGTTTGTAATTGTGTGATTTTCTTCATTAAAAAAAATCTGTTGTTATAATGAGGACACAAAAAC
AAAGCGAATGGAGGCTATTC

Downstream 100 bases:

>100_bases
TATATCATGAAAAAACCTGTTAGGAATTTCCTGACAGGTTTTTTGTATGTTAAAAGGGATATATAGTTCGACCAGTAATA
ATTTTATACATGCTACAAAA

Product: 3D domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MKKIVGIAIAAFFGFGIYDSSAKAETVVTTDVLNVREEPTVESTVVGKVLKGHELHVVNTENGWSQIKWNGKDVFVSAAF
TKNMYYVTANALNVRAGMSASSEILGTLKKDDLIETTNQIQNGWLQFHYNGKTAYVYASFLTEKAPVKVVTPVKEKAPVK
QVQTKAQVVQSKPVVQEKKQTQVVQSKPKTTSEPSGGRELTVEATAYTAHPSENGTYGGRVLTAMGHDLTANPNMKVIAV
DPNVIPLGSKVWVEGYGEAIAGDTGGAIKGNRIDVLVGSDGTANQWGRKHVKVKIIK

Sequences:

>Translated_297_residues
MKKIVGIAIAAFFGFGIYDSSAKAETVVTTDVLNVREEPTVESTVVGKVLKGHELHVVNTENGWSQIKWNGKDVFVSAAF
TKNMYYVTANALNVRAGMSASSEILGTLKKDDLIETTNQIQNGWLQFHYNGKTAYVYASFLTEKAPVKVVTPVKEKAPVK
QVQTKAQVVQSKPVVQEKKQTQVVQSKPKTTSEPSGGRELTVEATAYTAHPSENGTYGGRVLTAMGHDLTANPNMKVIAV
DPNVIPLGSKVWVEGYGEAIAGDTGGAIKGNRIDVLVGSDGTANQWGRKHVKVKIIK
>Mature_297_residues
MKKIVGIAIAAFFGFGIYDSSAKAETVVTTDVLNVREEPTVESTVVGKVLKGHELHVVNTENGWSQIKWNGKDVFVSAAF
TKNMYYVTANALNVRAGMSASSEILGTLKKDDLIETTNQIQNGWLQFHYNGKTAYVYASFLTEKAPVKVVTPVKEKAPVK
QVQTKAQVVQSKPVVQEKKQTQVVQSKPKTTSEPSGGRELTVEATAYTAHPSENGTYGGRVLTAMGHDLTANPNMKVIAV
DPNVIPLGSKVWVEGYGEAIAGDTGGAIKGNRIDVLVGSDGTANQWGRKHVKVKIIK

Specific function: Unknown

COG id: COG3584

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted, cell wall. Note=Released into the medium [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF06725 3D; PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 32045; Mature: 32045

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIVGIAIAAFFGFGIYDSSAKAETVVTTDVLNVREEPTVESTVVGKVLKGHELHVVNT
CCHHHHHHHHHHHHCCEECCCCCCEEEEEEEHHCCCCCCCHHHHHHHHHHCCCEEEEEEC
ENGWSQIKWNGKDVFVSAAFTKNMYYVTANALNVRAGMSASSEILGTLKKDDLIETTNQI
CCCCEEEEECCCEEEEEEEEECCEEEEEECEEEEECCCCCCHHHHHHCCCCHHHHHHHHH
QNGWLQFHYNGKTAYVYASFLTEKAPVKVVTPVKEKAPVKQVQTKAQVVQSKPVVQEKKQ
CCCEEEEEECCCEEEEEEEECCCCCCEEEECCCHHCCCHHHHHHHHHHHHCCCCHHHHHH
TQVVQSKPKTTSEPSGGRELTVEATAYTAHPSENGTYGGRVLTAMGHDLTANPNMKVIAV
HHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCEECCCCEEEEEE
DPNVIPLGSKVWVEGYGEAIAGDTGGAIKGNRIDVLVGSDGTANQWGRKHVKVKIIK
CCCEEECCCEEEEEECCCEECCCCCCCEECCEEEEEECCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MKKIVGIAIAAFFGFGIYDSSAKAETVVTTDVLNVREEPTVESTVVGKVLKGHELHVVNT
CCHHHHHHHHHHHHCCEECCCCCCEEEEEEEHHCCCCCCCHHHHHHHHHHCCCEEEEEEC
ENGWSQIKWNGKDVFVSAAFTKNMYYVTANALNVRAGMSASSEILGTLKKDDLIETTNQI
CCCCEEEEECCCEEEEEEEEECCEEEEEECEEEEECCCCCCHHHHHHCCCCHHHHHHHHH
QNGWLQFHYNGKTAYVYASFLTEKAPVKVVTPVKEKAPVKQVQTKAQVVQSKPVVQEKKQ
CCCEEEEEECCCEEEEEEEECCCCCCEEEECCCHHCCCHHHHHHHHHHHHCCCCHHHHHH
TQVVQSKPKTTSEPSGGRELTVEATAYTAHPSENGTYGGRVLTAMGHDLTANPNMKVIAV
HHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCEECCCCEEEEEE
DPNVIPLGSKVWVEGYGEAIAGDTGGAIKGNRIDVLVGSDGTANQWGRKHVKVKIIK
CCCEEECCCEEEEEECCCEECCCCCCCEECCEEEEEECCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]