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The map label for this gene is glnR [H]

Identifier: 152976098

GI number: 152976098

Start: 2468707

End: 2469096

Strand: Reverse

Name: glnR [H]

Synonym: Bcer98_2382

Alternate gene names: 152976098

Gene position: 2469096-2468707 (Counterclockwise)

Preceding gene: 152976099

Following gene: 152976097

Centisome position: 60.41

GC content: 34.87

Gene sequence:

>390_bases
ATGAAAGAAGATAGACGTTCTGCCCCGCTGTTTCCTATTGGAATTGTAATGGATTTAACACAACTATCTGCTCGTCAAAT
TCGCTACTATGAAGAACACAATTTGATTTCTCCAACCCGTACAAAGGGAAATCGTAGATTGTTTTCATTTAACGATGTAG
ATAAGTTGTTGGAAATTAAAGACTTGTTAGATCAAGGGCTAAACATGGCTGGTGTTAAACAAGTATTACAAATGAAAGAA
AATCAAACAGAAGCAGTGAAAACAAAAGAAGAAACAAAAGAAATTTCAAAAGCTGAGCTTCGTAGAATTCTTCGAGATGA
ATTGCAACATACTGGTCGATTCAATCGAACTTCATTACGACAAGGTGATATTTCGAGGTTTTTTCACTAA

Upstream 100 bases:

>100_bases
ATTTACAAAAAAATCATGTAAGAAAAGCTAACATGTATTGACATCAAACATAACATAATATAAAATGAGAAACAGTTAAG
GCGAAGGAGGAACTGAAACA

Downstream 100 bases:

>100_bases
GGGTTACTGATTCTGAAGGTGATTAGAGGGATTAAGGAGGAATTTATAATGGCAAAGTATACGAAAGAAGATATTTTTCG
TTTAGCGAAAGAAGAGAATG

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MKEDRRSAPLFPIGIVMDLTQLSARQIRYYEEHNLISPTRTKGNRRLFSFNDVDKLLEIKDLLDQGLNMAGVKQVLQMKE
NQTEAVKTKEETKEISKAELRRILRDELQHTGRFNRTSLRQGDISRFFH

Sequences:

>Translated_129_residues
MKEDRRSAPLFPIGIVMDLTQLSARQIRYYEEHNLISPTRTKGNRRLFSFNDVDKLLEIKDLLDQGLNMAGVKQVLQMKE
NQTEAVKTKEETKEISKAELRRILRDELQHTGRFNRTSLRQGDISRFFH
>Mature_129_residues
MKEDRRSAPLFPIGIVMDLTQLSARQIRYYEEHNLISPTRTKGNRRLFSFNDVDKLLEIKDLLDQGLNMAGVKQVLQMKE
NQTEAVKTKEETKEISKAELRRILRDELQHTGRFNRTSLRQGDISRFFH

Specific function: Repressor for the glnRA operon. Binds specifically to the promoter region of the glnRA operon [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 15189; Mature: 15189

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEDRRSAPLFPIGIVMDLTQLSARQIRYYEEHNLISPTRTKGNRRLFSFNDVDKLLEIK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHH
DLLDQGLNMAGVKQVLQMKENQTEAVKTKEETKEISKAELRRILRDELQHTGRFNRTSLR
HHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHC
QGDISRFFH
CCCHHHHCC
>Mature Secondary Structure
MKEDRRSAPLFPIGIVMDLTQLSARQIRYYEEHNLISPTRTKGNRRLFSFNDVDKLLEIK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHH
DLLDQGLNMAGVKQVLQMKENQTEAVKTKEETKEISKAELRRILRDELQHTGRFNRTSLR
HHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHC
QGDISRFFH
CCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]