Click here to switch to the map view.

The map label for this gene is yjnA [H]

Identifier: 152976090

GI number: 152976090

Start: 2456390

End: 2457163

Strand: Reverse

Name: yjnA [H]

Synonym: Bcer98_2368

Alternate gene names: 152976090

Gene position: 2457163-2456390 (Counterclockwise)

Preceding gene: 152976097

Following gene: 152976089

Centisome position: 60.12

GC content: 33.33

Gene sequence:

>774_bases
ATGAGTATTTCTATTATAATGATGGGTTTCATTATAGGAGGATTGGTTGGAGTAACAGGGATAGGCGGAGCTGCATTACT
GACTCCATTTCTTCTAACACTAGGTATAAGTCCTTCTGTAGCTGTTGGAACGGATTTAGTATATAATTCTATCACTAAAA
TGTTTGGAATATCCCAACACTGGAAACAGAAGACCATCAATTTTAGATTAGTAAAATATCTAGCTGTTGGGAGTATCCCT
AGTGCGGTTATCGCAGTGGTAACAATTCATGTCTTACCAATTGTTCATTATAATCGAGAGGGAATTATAAAATATATATT
AGGTTATGTTTTAATTATTGCGGCAATTTCTATTTTTATAAAAATATTTTTCTATAATGAATCTAGGCAAAATTATTTTC
AAAAACAGACTATGAAACAAAAAAAGAACCTAACAGTTATTATTGGCGCAATACTCGGTTTTATCGTGGGGCTTACTTCT
GTTGGATCAGGCTCTTTATTCGCTATTGCAATGATATATTTATATCGACTGGAACCATCCGAATTAGTGGGAACGGATAT
TACACATGCGTTTTTATTAGTGACGGTTGCAAGCATACTAAATATGAATTTAGGAAACGTAGATTATCTTTTATTAATTC
ACCTACTCATTGGTTCTATCCCAGGTGTCATACTTGGGAGTAAATTCTCCACTAAGATCCCCGTTAAACTTCTTCAAATA
TTTTTAGCTATCATTATTGGTGTTAGTGGACTAAAGTTAGTTATCGCGTATTAA

Upstream 100 bases:

>100_bases
AAATTAATTTTTAACTCATATGCTTATACTCCCACTATGCATAGAGTCCCTTTAAAAAACAATCACTATTAAAAGCCAGC
GGTATGGAAGGGGAATTATC

Downstream 100 bases:

>100_bases
AAATATTTTATGTTTTTGCTATATAAGAATGGAGGTTCAAAATGAATCATACAGAACTATATAATTTTATACTCAAGCAA
GGGCGTATACCTCATTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MSISIIMMGFIIGGLVGVTGIGGAALLTPFLLTLGISPSVAVGTDLVYNSITKMFGISQHWKQKTINFRLVKYLAVGSIP
SAVIAVVTIHVLPIVHYNREGIIKYILGYVLIIAAISIFIKIFFYNESRQNYFQKQTMKQKKNLTVIIGAILGFIVGLTS
VGSGSLFAIAMIYLYRLEPSELVGTDITHAFLLVTVASILNMNLGNVDYLLLIHLLIGSIPGVILGSKFSTKIPVKLLQI
FLAIIIGVSGLKLVIAY

Sequences:

>Translated_257_residues
MSISIIMMGFIIGGLVGVTGIGGAALLTPFLLTLGISPSVAVGTDLVYNSITKMFGISQHWKQKTINFRLVKYLAVGSIP
SAVIAVVTIHVLPIVHYNREGIIKYILGYVLIIAAISIFIKIFFYNESRQNYFQKQTMKQKKNLTVIIGAILGFIVGLTS
VGSGSLFAIAMIYLYRLEPSELVGTDITHAFLLVTVASILNMNLGNVDYLLLIHLLIGSIPGVILGSKFSTKIPVKLLQI
FLAIIIGVSGLKLVIAY
>Mature_256_residues
SISIIMMGFIIGGLVGVTGIGGAALLTPFLLTLGISPSVAVGTDLVYNSITKMFGISQHWKQKTINFRLVKYLAVGSIPS
AVIAVVTIHVLPIVHYNREGIIKYILGYVLIIAAISIFIKIFFYNESRQNYFQKQTMKQKKNLTVIIGAILGFIVGLTSV
GSGSLFAIAMIYLYRLEPSELVGTDITHAFLLVTVASILNMNLGNVDYLLLIHLLIGSIPGVILGSKFSTKIPVKLLQIF
LAIIIGVSGLKLVIAY

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27830; Mature: 27699

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCCCEEEEEC
>Mature Secondary Structure 
SISIIMMGFIIGGLVGVTGIGGAALLTPFLLTLGISPSVAVGTDLVYNSITKMFGISQH
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHH
WKQKTINFRLVKYLAVGSIPSAVIAVVTIHVLPIVHYNREGIIKYILGYVLIIAAISIFI
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
KIFFYNESRQNYFQKQTMKQKKNLTVIIGAILGFIVGLTSVGSGSLFAIAMIYLYRLEPS
HHHEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHH
ELVGTDITHAFLLVTVASILNMNLGNVDYLLLIHLLIGSIPGVILGSKFSTKIPVKLLQI
HHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHH
FLAIIIGVSGLKLVIAY
HHHHHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]