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The map label for this gene is paiB [H]

Identifier: 152976085

GI number: 152976085

Start: 2451278

End: 2451889

Strand: Reverse

Name: paiB [H]

Synonym: Bcer98_2362

Alternate gene names: 152976085

Gene position: 2451889-2451278 (Counterclockwise)

Preceding gene: 152976087

Following gene: 152976084

Centisome position: 59.99

GC content: 30.23

Gene sequence:

>612_bases
ATGTACATTCCTAAAATATTTAAAATGAAAAAACTAAAAGTTGCTTACGATGTAATACATAAAAACAGCTTTGCAACATT
AGTTTCAATGCATGAAGATATACCTTTTGCAACACATCTACCACTACTTTTAAATAAAGAGAACACTTATTTATATGGTC
ATTTTGCTCTTCAGAACCCTCAGTGGAAAGATATTGAAAATAAATTAGTTTTAGCTATTTTTCATGGGCCGCATTGTTAT
ATTTCTCCCTCTTGGTACGAGACCAACCAAGCAGTACCCACATGGAATTATGTGACTGTTCATGTCTATGGAGAATTCGA
ATTTATTGAGAATGAACATGAATTAATGGATTCCTTACATGACATGGTATTGAAGTATGAAGCTCCTAATAGTTCATATA
AATTAAAAGATCTAGACACTACTTATCTCTCCGGGATGAACAAAGGTATTCAAGGATTCAAAATTAAAATTATCAAAATT
GAGGGAAAAGAAAAGTTGAGTCAAAACCAACCATTACACAGACGAGAATTAATTGTTAATCAACTAGAAAAAATATCAAA
TGAAGATGAGCAAAATATTTCCTTTTTAATGAAGGAGAATTTAAAAAAGTAA

Upstream 100 bases:

>100_bases
TCAGTTTGTATATTACTATCTTTATCAAAGGTTGTTATAATTGTGAACCGCTTGCCTGTTGTACTAAAAAATTTATATAC
AAATTGAAAGGAGATTTTTT

Downstream 100 bases:

>100_bases
TCGTAATCTTATTGTTTTGATTTCCAATTCCAATTCTTTCAGCTGGAGGAATATTTATAAATATTTTTATTTCATATCAA
AATGCAAATAGTAAAGGAGT

Product: FMN-binding negative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MYIPKIFKMKKLKVAYDVIHKNSFATLVSMHEDIPFATHLPLLLNKENTYLYGHFALQNPQWKDIENKLVLAIFHGPHCY
ISPSWYETNQAVPTWNYVTVHVYGEFEFIENEHELMDSLHDMVLKYEAPNSSYKLKDLDTTYLSGMNKGIQGFKIKIIKI
EGKEKLSQNQPLHRRELIVNQLEKISNEDEQNISFLMKENLKK

Sequences:

>Translated_203_residues
MYIPKIFKMKKLKVAYDVIHKNSFATLVSMHEDIPFATHLPLLLNKENTYLYGHFALQNPQWKDIENKLVLAIFHGPHCY
ISPSWYETNQAVPTWNYVTVHVYGEFEFIENEHELMDSLHDMVLKYEAPNSSYKLKDLDTTYLSGMNKGIQGFKIKIIKI
EGKEKLSQNQPLHRRELIVNQLEKISNEDEQNISFLMKENLKK
>Mature_203_residues
MYIPKIFKMKKLKVAYDVIHKNSFATLVSMHEDIPFATHLPLLLNKENTYLYGHFALQNPQWKDIENKLVLAIFHGPHCY
ISPSWYETNQAVPTWNYVTVHVYGEFEFIENEHELMDSLHDMVLKYEAPNSSYKLKDLDTTYLSGMNKGIQGFKIKIIKI
EGKEKLSQNQPLHRRELIVNQLEKISNEDEQNISFLMKENLKK

Specific function: Involved in the reduction of extracellular and cell- associated protease levels, as well as in the reduced levels of alpha-amylase, levansucrase, alkaline phosphatase and sporulation inhibition, when present in high copy number [H]

COG id: COG2808

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the paiB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007396
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF04299 FMN_bind_2 [H]

EC number: NA

Molecular weight: Translated: 23903; Mature: 23903

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIPKIFKMKKLKVAYDVIHKNSFATLVSMHEDIPFATHLPLLLNKENTYLYGHFALQNP
CCCCCHHHHHHHHHHHHHHHCCCHHHEEHHHCCCCCHHCCCEEEECCCCEEEEEEEECCC
QWKDIENKLVLAIFHGPHCYISPSWYETNQAVPTWNYVTVHVYGEFEFIENEHELMDSLH
CCCCCCCEEEEEEEECCEEEECCCEECCCCCCCCCEEEEEEEEEEEEEECCHHHHHHHHH
DMVLKYEAPNSSYKLKDLDTTYLSGMNKGIQGFKIKIIKIEGKEKLSQNQPLHRRELIVN
HHHEEEECCCCCEEEEECCHHHHHHCCCCCCCEEEEEEEECCHHHHHCCCCHHHHHHHHH
QLEKISNEDEQNISFLMKENLKK
HHHHHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MYIPKIFKMKKLKVAYDVIHKNSFATLVSMHEDIPFATHLPLLLNKENTYLYGHFALQNP
CCCCCHHHHHHHHHHHHHHHCCCHHHEEHHHCCCCCHHCCCEEEECCCCEEEEEEEECCC
QWKDIENKLVLAIFHGPHCYISPSWYETNQAVPTWNYVTVHVYGEFEFIENEHELMDSLH
CCCCCCCEEEEEEEECCEEEECCCEECCCCCCCCCEEEEEEEEEEEEEECCHHHHHHHHH
DMVLKYEAPNSSYKLKDLDTTYLSGMNKGIQGFKIKIIKIEGKEKLSQNQPLHRRELIVN
HHHEEEECCCCCEEEEECCHHHHHHCCCCCCCEEEEEEEECCHHHHHCCCCHHHHHHHHH
QLEKISNEDEQNISFLMKENLKK
HHHHHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108124; 9384377 [H]