Click here to switch to the map view.

The map label for this gene is yizB [H]

Identifier: 152976071

GI number: 152976071

Start: 2441741

End: 2442052

Strand: Reverse

Name: yizB [H]

Synonym: Bcer98_2347

Alternate gene names: 152976071

Gene position: 2442052-2441741 (Counterclockwise)

Preceding gene: 152976072

Following gene: 152976070

Centisome position: 59.75

GC content: 35.9

Gene sequence:

>312_bases
TTGAACGTCCAGTTTAAGAAAGGTGTGCTGGAGCTTTGTGTACTGGCACTTGTTAAAAGAAAAGATTGTTATGGGTATGA
ACTTGTTCAAGAGATTTCTAATAAATTTTTAATATCAGAAGGTTCCGTTTATCCGTTGTTACGCCGATTAACGAAAGAAG
GGTATTTTCAAACATATTTAAAAGAATCAACGGAAGGACCACCGCGTAAATATTATCAATTAACAGATCAAGGAGAAGAA
CAACTACATTTACTTGTAACGGAATGGCGTGATTTCGCTAAAGGGGTACAGGAAATTATTGAAGGGGTGTAA

Upstream 100 bases:

>100_bases
AATAGTCAACAGTACCTTGTAATAAATAGTAGTAAATGGTATATTATGGTTAGTGTAAGTACCTTGCATTAATTAGTACT
GATAAAAAGGAGGATTGTCT

Downstream 100 bases:

>100_bases
TGATATGAATCAAGAGCAATTTCTTCAGGAATTATCAACACATCTTAGAAAGCTACCAGAAGAAGAAAGAAGAGATATTC
TATATGACTATGAGGAACAT

Product: PadR-like family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MNVQFKKGVLELCVLALVKRKDCYGYELVQEISNKFLISEGSVYPLLRRLTKEGYFQTYLKESTEGPPRKYYQLTDQGEE
QLHLLVTEWRDFAKGVQEIIEGV

Sequences:

>Translated_103_residues
MNVQFKKGVLELCVLALVKRKDCYGYELVQEISNKFLISEGSVYPLLRRLTKEGYFQTYLKESTEGPPRKYYQLTDQGEE
QLHLLVTEWRDFAKGVQEIIEGV
>Mature_103_residues
MNVQFKKGVLELCVLALVKRKDCYGYELVQEISNKFLISEGSVYPLLRRLTKEGYFQTYLKESTEGPPRKYYQLTDQGEE
QLHLLVTEWRDFAKGVQEIIEGV

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 12037; Mature: 12037

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVQFKKGVLELCVLALVKRKDCYGYELVQEISNKFLISEGSVYPLLRRLTKEGYFQTYL
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHH
KESTEGPPRKYYQLTDQGEEQLHLLVTEWRDFAKGVQEIIEGV
HHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNVQFKKGVLELCVLALVKRKDCYGYELVQEISNKFLISEGSVYPLLRRLTKEGYFQTYL
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHH
KESTEGPPRKYYQLTDQGEEQLHLLVTEWRDFAKGVQEIIEGV
HHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]