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The map label for this gene is nrdD [H]

Identifier: 152975979

GI number: 152975979

Start: 2354389

End: 2356245

Strand: Reverse

Name: nrdD [H]

Synonym: Bcer98_2252

Alternate gene names: 152975979

Gene position: 2356245-2354389 (Counterclockwise)

Preceding gene: 152975982

Following gene: 152975978

Centisome position: 57.65

GC content: 37.26

Gene sequence:

>1857_bases
ATGATAACAAAAAGTATACGTGAAGAAGAACTTATGAAGGTTTTTGAAACAATTGTCCATGGTCATGAACAGGATTTAAT
GCAAGAAAATGCAAATGTCGATGGCCGATCTCCGATGGGGATGATGGGAACATTGGCTTCAGAGAGTGCAAAATATTATG
CAGTAGAAACGTTATTATCTGATCAAGTGAGAAAAGCGATTAAGCAAAATATATTATATCCACATGATTTAGATTTTTAT
GTGACAGGTACGACAACATGTTCACAAATTCCATTAGCACAAATGTTGGAGAATGGATTTCATACAGGACACGGTCATAT
GAGAGAACCGCAAGATATAAAAAGTGCATTGGCGCTTGCTTCGATTATTTTTCAGGCTAATCAAAATATGCAGCATGGTG
GACAATCGTTTGCGCTATTTGATGTTGATTTAGCGCCGTATGTAAAAAAAACATTTGAAAGAAATAAAAAACGATTAGAA
AAATATCCATTACAAGCGGAACAAATAGAAGAGTTTGCATGGAAAGAAACAGAAAATGATACGTACCAAGCATGTGAAGC
GTTTATTCATAATTCCAATAGTATGCATAGCCGAGGTGGTGGACAAGTACCGTTTATTTCTATTAATTACGGAACAGACA
CATCAAAAGAAGGAAGACTATTAATTAAACAATTGTTACGGGCAACGCAAGCGGGCTTAGGGGCAGGAGAAACACCCATT
TTTCCTATTCAAATTTTTAAATTAAAAAAAGGTGTGAATTTTGAAGAGAGTGATCCGAACTATGATTTATTTGAATTAGC
GTTAGAAACGACAGCAGAGCGATTATTTCCGAATTTCTCATTTTTAGATGCACCGTTTAATGCTGCTTATTATGATGGAA
GTCATGAAAGTGAAGCGTGTTATATGGGGTGTAGAACTCGTGTGATGGCTAACATTCATGGGGAGGAAAATGCAATTGGA
AGAGGAAATCTCTCTTTTACATCTATCAATTTAGTGAAATTAGCATTGATTAGTGGATCAAAAGAAGCTTTTTTTGAGGC
ATTACAGTATTATCTAGATCTTGGTGTTCGTCAACTGCTAGAAAGATTTGCTTACCAATGTACAAAAAAAGCAAGAGATT
TTCAATTTTTATATTCACAAGGCGTATGGCGTGGGGGAGAGAAGTTACAACCTGAAGATTCTGTAGCTGAAATCTTAAAA
CAAGGTACGCTTAGCATCGGTTTTATTGGTCTTGCGGAATGTTTAGTTGCTTTAACTGGTAAACACCATGGAGAAGATGA
AGGTACTTGGCAACTTGGGTATGAAATCGTTCGGTTTATGAGACAGAAAATGGACGAGGCAACAGAGAAATACAATTTGA
ATTTTTCGTTAATCGCAACGCCGGCCGAAGGACTTTCTGGAAAATTCGTGAAAAAGGATCGAGAAGAGTTCGGGAGTATA
AATGGGGTAACCAATCGTAATTACTATACAAATTCATTTCATATTCCGGTGTATTACCCTATTCAAGCTGTGAAAAAAAT
TCGATTAGAGGGGCCTTTTCATGCACTGTGTAACGGGGGGCATATTACGTATATTGAATTAGATGGTGCTGCTGTTCATA
ATGTAAAAGCATTAAAACAAATTGTACAAGCGATGTCGCAGTATGGAGTAGGATACGGATCAATCAATCATCCTGTGGAC
CGTTGTAAGTGCTGTGGTTATCGTGGTGTAATTGAAAATGAGTGTCCAAGTTGTGGGAACGAAAATGAACATGAAATCGA
AAGAATTCGTCGTATTACTGGGTATTTAGTAGGAGATATGTCGAAGTGGAATAGCGCAAAGCGTAGGGAAGAAGCGGATC
GGGTGAAGCATAAATGA

Upstream 100 bases:

>100_bases
AAACTTTCACAGGAATGTTACATTTCTCGCAGAATCATCCGAACTATATGTTGTATCATTTAGTTAGATTGGTAACAAGA
TATAGTTGGAGGGTTCGGTA

Downstream 100 bases:

>100_bases
GAGTAATGAACATGATTCATGATAGTGTAGTAGATGGAGAAGGATTGCGGACAGTCGTGTTTTTTGCGGGCTGTCCGCAT
CGTTGTGTTGGTTGTCATAA

Product: anaerobic ribonucleoside triphosphate reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 618; Mature: 618

Protein sequence:

>618_residues
MITKSIREEELMKVFETIVHGHEQDLMQENANVDGRSPMGMMGTLASESAKYYAVETLLSDQVRKAIKQNILYPHDLDFY
VTGTTTCSQIPLAQMLENGFHTGHGHMREPQDIKSALALASIIFQANQNMQHGGQSFALFDVDLAPYVKKTFERNKKRLE
KYPLQAEQIEEFAWKETENDTYQACEAFIHNSNSMHSRGGGQVPFISINYGTDTSKEGRLLIKQLLRATQAGLGAGETPI
FPIQIFKLKKGVNFEESDPNYDLFELALETTAERLFPNFSFLDAPFNAAYYDGSHESEACYMGCRTRVMANIHGEENAIG
RGNLSFTSINLVKLALISGSKEAFFEALQYYLDLGVRQLLERFAYQCTKKARDFQFLYSQGVWRGGEKLQPEDSVAEILK
QGTLSIGFIGLAECLVALTGKHHGEDEGTWQLGYEIVRFMRQKMDEATEKYNLNFSLIATPAEGLSGKFVKKDREEFGSI
NGVTNRNYYTNSFHIPVYYPIQAVKKIRLEGPFHALCNGGHITYIELDGAAVHNVKALKQIVQAMSQYGVGYGSINHPVD
RCKCCGYRGVIENECPSCGNENEHEIERIRRITGYLVGDMSKWNSAKRREEADRVKHK

Sequences:

>Translated_618_residues
MITKSIREEELMKVFETIVHGHEQDLMQENANVDGRSPMGMMGTLASESAKYYAVETLLSDQVRKAIKQNILYPHDLDFY
VTGTTTCSQIPLAQMLENGFHTGHGHMREPQDIKSALALASIIFQANQNMQHGGQSFALFDVDLAPYVKKTFERNKKRLE
KYPLQAEQIEEFAWKETENDTYQACEAFIHNSNSMHSRGGGQVPFISINYGTDTSKEGRLLIKQLLRATQAGLGAGETPI
FPIQIFKLKKGVNFEESDPNYDLFELALETTAERLFPNFSFLDAPFNAAYYDGSHESEACYMGCRTRVMANIHGEENAIG
RGNLSFTSINLVKLALISGSKEAFFEALQYYLDLGVRQLLERFAYQCTKKARDFQFLYSQGVWRGGEKLQPEDSVAEILK
QGTLSIGFIGLAECLVALTGKHHGEDEGTWQLGYEIVRFMRQKMDEATEKYNLNFSLIATPAEGLSGKFVKKDREEFGSI
NGVTNRNYYTNSFHIPVYYPIQAVKKIRLEGPFHALCNGGHITYIELDGAAVHNVKALKQIVQAMSQYGVGYGSINHPVD
RCKCCGYRGVIENECPSCGNENEHEIERIRRITGYLVGDMSKWNSAKRREEADRVKHK
>Mature_618_residues
MITKSIREEELMKVFETIVHGHEQDLMQENANVDGRSPMGMMGTLASESAKYYAVETLLSDQVRKAIKQNILYPHDLDFY
VTGTTTCSQIPLAQMLENGFHTGHGHMREPQDIKSALALASIIFQANQNMQHGGQSFALFDVDLAPYVKKTFERNKKRLE
KYPLQAEQIEEFAWKETENDTYQACEAFIHNSNSMHSRGGGQVPFISINYGTDTSKEGRLLIKQLLRATQAGLGAGETPI
FPIQIFKLKKGVNFEESDPNYDLFELALETTAERLFPNFSFLDAPFNAAYYDGSHESEACYMGCRTRVMANIHGEENAIG
RGNLSFTSINLVKLALISGSKEAFFEALQYYLDLGVRQLLERFAYQCTKKARDFQFLYSQGVWRGGEKLQPEDSVAEILK
QGTLSIGFIGLAECLVALTGKHHGEDEGTWQLGYEIVRFMRQKMDEATEKYNLNFSLIATPAEGLSGKFVKKDREEFGSI
NGVTNRNYYTNSFHIPVYYPIQAVKKIRLEGPFHALCNGGHITYIELDGAAVHNVKALKQIVQAMSQYGVGYGSINHPVD
RCKCCGYRGVIENECPSCGNENEHEIERIRRITGYLVGDMSKWNSAKRREEADRVKHK

Specific function: Unknown

COG id: COG1328

COG function: function code F; Oxygen-sensitive ribonucleoside-triphosphate reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glycine radical domain [H]

Homologues:

Organism=Escherichia coli, GI1790686, Length=614, Percent_Identity=34.5276872964169, Blast_Score=316, Evalue=3e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR001150
- InterPro:   IPR019777
- InterPro:   IPR012833 [H]

Pfam domain/function: PF03477 ATP-cone; PF01228 Gly_radical [H]

EC number: =1.17.4.2 [H]

Molecular weight: Translated: 69747; Mature: 69747

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITKSIREEELMKVFETIVHGHEQDLMQENANVDGRSPMGMMGTLASESAKYYAVETLLS
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHH
DQVRKAIKQNILYPHDLDFYVTGTTTCSQIPLAQMLENGFHTGHGHMREPQDIKSALALA
HHHHHHHHHCCCCCCCCCEEEECCCCHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
SIIFQANQNMQHGGQSFALFDVDLAPYVKKTFERNKKRLEKYPLQAEQIEEFAWKETEND
HHHHHHCCCHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH
TYQACEAFIHNSNSMHSRGGGQVPFISINYGTDTSKEGRLLIKQLLRATQAGLGAGETPI
HHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCE
FPIQIFKLKKGVNFEESDPNYDLFELALETTAERLFPNFSFLDAPFNAAYYDGSHESEAC
EEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCEEECCCCCCCHH
YMGCRTRVMANIHGEENAIGRGNLSFTSINLVKLALISGSKEAFFEALQYYLDLGVRQLL
HHHHHHHHHEECCCCCCCCCCCCCEEEEHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHH
ERFAYQCTKKARDFQFLYSQGVWRGGEKLQPEDSVAEILKQGTLSIGFIGLAECLVALTG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHC
KHHGEDEGTWQLGYEIVRFMRQKMDEATEKYNLNFSLIATPAEGLSGKFVKKDREEFGSI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCC
NGVTNRNYYTNSFHIPVYYPIQAVKKIRLEGPFHALCNGGHITYIELDGAAVHNVKALKQ
CCCCCCCEECCEEEEEEEECHHHHHHHHCCCCHHHHCCCCEEEEEEECCCHHHHHHHHHH
IVQAMSQYGVGYGSINHPVDRCKCCGYRGVIENECPSCGNENEHEIERIRRITGYLVGDM
HHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH
SKWNSAKRREEADRVKHK
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MITKSIREEELMKVFETIVHGHEQDLMQENANVDGRSPMGMMGTLASESAKYYAVETLLS
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHH
DQVRKAIKQNILYPHDLDFYVTGTTTCSQIPLAQMLENGFHTGHGHMREPQDIKSALALA
HHHHHHHHHCCCCCCCCCEEEECCCCHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
SIIFQANQNMQHGGQSFALFDVDLAPYVKKTFERNKKRLEKYPLQAEQIEEFAWKETEND
HHHHHHCCCHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH
TYQACEAFIHNSNSMHSRGGGQVPFISINYGTDTSKEGRLLIKQLLRATQAGLGAGETPI
HHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCE
FPIQIFKLKKGVNFEESDPNYDLFELALETTAERLFPNFSFLDAPFNAAYYDGSHESEAC
EEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCEEECCCCCCCHH
YMGCRTRVMANIHGEENAIGRGNLSFTSINLVKLALISGSKEAFFEALQYYLDLGVRQLL
HHHHHHHHHEECCCCCCCCCCCCCEEEEHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHH
ERFAYQCTKKARDFQFLYSQGVWRGGEKLQPEDSVAEILKQGTLSIGFIGLAECLVALTG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHC
KHHGEDEGTWQLGYEIVRFMRQKMDEATEKYNLNFSLIATPAEGLSGKFVKKDREEFGSI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCC
NGVTNRNYYTNSFHIPVYYPIQAVKKIRLEGPFHALCNGGHITYIELDGAAVHNVKALKQ
CCCCCCCEECCEEEEEEEECHHHHHHHHCCCCHHHHCCCCEEEEEEECCCHHHHHHHHHH
IVQAMSQYGVGYGSINHPVDRCKCCGYRGVIENECPSCGNENEHEIERIRRITGYLVGDM
HHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH
SKWNSAKRREEADRVKHK
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8421692; 7610040; 9278503; 8083158; 7852304 [H]