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The map label for this gene is ysdA [H]

Identifier: 152975962

GI number: 152975962

Start: 2330916

End: 2331164

Strand: Reverse

Name: ysdA [H]

Synonym: Bcer98_2235

Alternate gene names: 152975962

Gene position: 2331164-2330916 (Counterclockwise)

Preceding gene: 152975963

Following gene: 152975961

Centisome position: 57.04

GC content: 36.55

Gene sequence:

>249_bases
ATGAAGTGGATTTATTTTATCGTTATTAATGTGATTGCATTTAGTATGATGGGATTGGATAAACGAAAGGCCAGAAAGAA
AAAATGGCGCACGCCAGAAAGGACATTATTTTTAGTAGCAGCGGCTGGAGGGGCACTTGGAGCATGGTTTGGTATGTATG
TTTTTCATCATAAAACACATAAGAATCAATTTGTACTTGGGATTCCTCTGCTTGTTTTCATTACAATTGGCCTGTTTTTT
GCTGTATAA

Upstream 100 bases:

>100_bases
AACAAGAAGAACAAGAACAGACGTATGAATGACCATGCAGGCTCGCTTGCATGGTTTTTTCATGATACAATAAAGCGAAT
TTTGAGAAGGAGAAAAAGGA

Downstream 100 bases:

>100_bases
AAAATGAGAATACAAAGTGTGTCGAAAAAAATGCAGTTTCAATATTGGAAAAATTCATGTAAGGCAACGTATAATGGAGA
GAAAAAGAGAAGAGGGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MKWIYFIVINVIAFSMMGLDKRKARKKKWRTPERTLFLVAAAGGALGAWFGMYVFHHKTHKNQFVLGIPLLVFITIGLFF
AV

Sequences:

>Translated_82_residues
MKWIYFIVINVIAFSMMGLDKRKARKKKWRTPERTLFLVAAAGGALGAWFGMYVFHHKTHKNQFVLGIPLLVFITIGLFF
AV
>Mature_82_residues
MKWIYFIVINVIAFSMMGLDKRKARKKKWRTPERTLFLVAAAGGALGAWFGMYVFHHKTHKNQFVLGIPLLVFITIGLFF
AV

Specific function: Unknown

COG id: COG3326

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010718 [H]

Pfam domain/function: PF06961 DUF1294 [H]

EC number: NA

Molecular weight: Translated: 9460; Mature: 9460

Theoretical pI: Translated: 11.51; Mature: 11.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWIYFIVINVIAFSMMGLDKRKARKKKWRTPERTLFLVAAAGGALGAWFGMYVFHHKTH
CHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCC
KNQFVLGIPLLVFITIGLFFAV
CCCEEEHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKWIYFIVINVIAFSMMGLDKRKARKKKWRTPERTLFLVAAAGGALGAWFGMYVFHHKTH
CHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCC
KNQFVLGIPLLVFITIGLFFAV
CCCEEEHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]