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The map label for this gene is bdlA [H]

Identifier: 152975936

GI number: 152975936

Start: 2293597

End: 2294445

Strand: Reverse

Name: bdlA [H]

Synonym: Bcer98_2208

Alternate gene names: 152975936

Gene position: 2294445-2293597 (Counterclockwise)

Preceding gene: 152975937

Following gene: 152975935

Centisome position: 56.14

GC content: 31.92

Gene sequence:

>849_bases
ATGAATAAAAGGGAGTTTTTTCTTGTGGATATTTATTCTAATACAAATGGTAGTACTCAAGTATTAGATCAGTCGCTTGT
TTTAGCTGGATTAGAAGCGAATTTAGCGATGATTGAATTTAACCTAGATAAAGAGGTAATTTGGGTAAATGAACATTTTG
CACAAGCTTTAGGGTATACAGTTAATGAAATGAAAAATAAAGTTCATCAACAATTTTGTGTTCCTAGTTTTGTAAATAGT
AGAGAATATAATCAGCTATGGGATAATTTAAAACAAGGGATTAAGTTTCAAGAAAAAATTCAAAGAGTTACTAAAAAAGG
GGAGTTAGTTTGGTTTGAAGCTACATACATTCCAATCTTGAATGAGCAGGGAGCAGTAGAGGCTGTACTAAAAATTGCAA
CAGATATTACACAACGTGAAAATCAAACAAGAGAAGTTGTTTCTCAGCTGAAAGATTTATCAATAGACTTAGGAAATAGA
GTAAATGTTAATTCTAAGGAAAATATGGAAGCGCTCTATTCTTTGAGGGAAAAGGTTACTCTAGTAAGTGATATTGCTCA
AATCATTAAAGATATTTCTTCCCAAACAAATATCTTATCTTTAAATGCAGCGATTGAAGCAGCAAGAGTAGGAGAACATG
GACGGGGATTTGCAGTAGTAGCGGAGGAAGTAAGAAGATTAGCTAACAATGTTGAGAATGCAATCAAAAAAATCAATTCA
AATGTAGAGAGCATTGTAAAGGGAGTAGCTACTGTTAACGATGTGAATAAAAAATTACAAGAAGAAGTGATTGATAATCA
AGAGAAAATAAGTAAAACGATGGACGAGTTCGAAAAAATTGTAAATTGA

Upstream 100 bases:

>100_bases
ACTGATGAAAGTTTCACTGTATTAACAATTGCACAATTTATTTTGTATATTCATATTAACTTGTATTTTAATATTTAAAT
ATAATATAATAGTGAAAAAT

Downstream 100 bases:

>100_bases
TGATTGAAGAATAAACAACATTGTATCAATTAGTAGATGAAAAAGGAGCTTTAATCATAGAATGAGTAGGTAGAATTTTT
CTATGAGGATAATGTGCCGA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MNKREFFLVDIYSNTNGSTQVLDQSLVLAGLEANLAMIEFNLDKEVIWVNEHFAQALGYTVNEMKNKVHQQFCVPSFVNS
REYNQLWDNLKQGIKFQEKIQRVTKKGELVWFEATYIPILNEQGAVEAVLKIATDITQRENQTREVVSQLKDLSIDLGNR
VNVNSKENMEALYSLREKVTLVSDIAQIIKDISSQTNILSLNAAIEAARVGEHGRGFAVVAEEVRRLANNVENAIKKINS
NVESIVKGVATVNDVNKKLQEEVIDNQEKISKTMDEFEKIVN

Sequences:

>Translated_282_residues
MNKREFFLVDIYSNTNGSTQVLDQSLVLAGLEANLAMIEFNLDKEVIWVNEHFAQALGYTVNEMKNKVHQQFCVPSFVNS
REYNQLWDNLKQGIKFQEKIQRVTKKGELVWFEATYIPILNEQGAVEAVLKIATDITQRENQTREVVSQLKDLSIDLGNR
VNVNSKENMEALYSLREKVTLVSDIAQIIKDISSQTNILSLNAAIEAARVGEHGRGFAVVAEEVRRLANNVENAIKKINS
NVESIVKGVATVNDVNKKLQEEVIDNQEKISKTMDEFEKIVN
>Mature_282_residues
MNKREFFLVDIYSNTNGSTQVLDQSLVLAGLEANLAMIEFNLDKEVIWVNEHFAQALGYTVNEMKNKVHQQFCVPSFVNS
REYNQLWDNLKQGIKFQEKIQRVTKKGELVWFEATYIPILNEQGAVEAVLKIATDITQRENQTREVVSQLKDLSIDLGNR
VNVNSKENMEALYSLREKVTLVSDIAQIIKDISSQTNILSLNAAIEAARVGEHGRGFAVVAEEVRRLANNVENAIKKINS
NVESIVKGVATVNDVNKKLQEEVIDNQEKISKTMDEFEKIVN

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: COG2202

COG function: function code T; FOG: PAS/PAC domain

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=70, Percent_Identity=55.7142857142857, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI2367378, Length=127, Percent_Identity=39.3700787401575, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787690, Length=99, Percent_Identity=41.4141414141414, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1788194, Length=62, Percent_Identity=58.0645161290323, Blast_Score=71, Evalue=9e-14,
Organism=Escherichia coli, GI1789453, Length=86, Percent_Identity=45.3488372093023, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 31958; Mature: 31958

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKREFFLVDIYSNTNGSTQVLDQSLVLAGLEANLAMIEFNLDKEVIWVNEHFAQALGYT
CCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEHHHHHHHHHHHH
VNEMKNKVHQQFCVPSFVNSREYNQLWDNLKQGIKFQEKIQRVTKKGELVWFEATYIPIL
HHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEEEEEE
NEQGAVEAVLKIATDITQRENQTREVVSQLKDLSIDLGNRVNVNSKENMEALYSLREKVT
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LVSDIAQIIKDISSQTNILSLNAAIEAARVGEHGRGFAVVAEEVRRLANNVENAIKKINS
HHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
NVESIVKGVATVNDVNKKLQEEVIDNQEKISKTMDEFEKIVN
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKREFFLVDIYSNTNGSTQVLDQSLVLAGLEANLAMIEFNLDKEVIWVNEHFAQALGYT
CCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEHHHHHHHHHHHH
VNEMKNKVHQQFCVPSFVNSREYNQLWDNLKQGIKFQEKIQRVTKKGELVWFEATYIPIL
HHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEEEEEE
NEQGAVEAVLKIATDITQRENQTREVVSQLKDLSIDLGNRVNVNSKENMEALYSLREKVT
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LVSDIAQIIKDISSQTNILSLNAAIEAARVGEHGRGFAVVAEEVRRLANNVENAIKKINS
HHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
NVESIVKGVATVNDVNKKLQEEVIDNQEKISKTMDEFEKIVN
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]