Click here to switch to the map view.

The map label for this gene is ytdA [H]

Identifier: 152975817

GI number: 152975817

Start: 2176799

End: 2177620

Strand: Reverse

Name: ytdA [H]

Synonym: Bcer98_2075

Alternate gene names: 152975817

Gene position: 2177620-2176799 (Counterclockwise)

Preceding gene: 152975821

Following gene: 152975815

Centisome position: 53.28

GC content: 32.85

Gene sequence:

>822_bases
GTGATTAAAAAAGCAATCATTCCAGCTGCAGGTTATGGTACGAGAAGTCTTCCAATTACCAAAGTAGTCCCGAAAGAAAT
GTTTCCAATAGGGAATAAACCTGCGATTCATTATATTGTAGAAGAGGCTGTAAAATCAGGGATTGAGCAAATATTAATTG
TGGTTTCAAAAAGAAAAAATTTAATAGTTGATTACTTTGATCATTCATTAGAGTTAGAAGCTTTCTTAGAAAGAGAACAA
AAATCTTATTTATTAAAGAGTTTTGTGATTCCTGACATTCAAATACTATATACGAGACAGCCGTACGCGAGAGGCCTTGG
TGAAGCGATAAAATTAGGTGAAGCATTCATTGGTAATGAACCTTTTGCTGTACTTTTGCCAGATGATATTATCATTTCGG
ATAAAAGTACTGCTTTAAATCAATTAATTAAGATATATAAAGAGACAAAAAGTAGTGTAATCGGCGTCCACACAGTACCA
AATGAATTTTTAGATAAGTATGGGGTTGTGAAAGGCGATATGATAAAAGAGGGGTATATGGACATTACAAATATTGTTGA
AAAACCAAAAATAAATCCCCCATCTAATATGGCGGTTATTGGAAGGTATGTTTTTACACCTGATATTTTTTCTTTGTTAC
AAAATGTGCAGCCTGGTGTCGGAGGTGAGTATCAACTAACCGATGCAATTCATTCTTTAATTGCTATCCAAAAAGTATAT
GGGAAAATTATCGATGGGAAGCGATTTGATATTGGACAAGAAAATGATTATGTTCATCTTCTTAATTATATACATGGAAA
AAATAGAGCAAACACGAATTAA

Upstream 100 bases:

>100_bases
AGTGAAAAAGTAAGGGGTAAAAGCCTTTTTAAATTTTGTGATGAGCAGGTAAGAGGAATATTGAATATAATATGATAAAT
ATGCAGAAGGAGAGAGGATA

Downstream 100 bases:

>100_bases
AAAACACTTATTCATGTAACAATTTATAAAGAAAGGGTTTACAGAAGTTACTTTGTTCTTTTTATTTTTCTGTAATGTAT
TTAGATTAAACATAGTAAAA

Product: nucleotidyl transferase

Products: NA

Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MIKKAIIPAAGYGTRSLPITKVVPKEMFPIGNKPAIHYIVEEAVKSGIEQILIVVSKRKNLIVDYFDHSLELEAFLEREQ
KSYLLKSFVIPDIQILYTRQPYARGLGEAIKLGEAFIGNEPFAVLLPDDIIISDKSTALNQLIKIYKETKSSVIGVHTVP
NEFLDKYGVVKGDMIKEGYMDITNIVEKPKINPPSNMAVIGRYVFTPDIFSLLQNVQPGVGGEYQLTDAIHSLIAIQKVY
GKIIDGKRFDIGQENDYVHLLNYIHGKNRANTN

Sequences:

>Translated_273_residues
MIKKAIIPAAGYGTRSLPITKVVPKEMFPIGNKPAIHYIVEEAVKSGIEQILIVVSKRKNLIVDYFDHSLELEAFLEREQ
KSYLLKSFVIPDIQILYTRQPYARGLGEAIKLGEAFIGNEPFAVLLPDDIIISDKSTALNQLIKIYKETKSSVIGVHTVP
NEFLDKYGVVKGDMIKEGYMDITNIVEKPKINPPSNMAVIGRYVFTPDIFSLLQNVQPGVGGEYQLTDAIHSLIAIQKVY
GKIIDGKRFDIGQENDYVHLLNYIHGKNRANTN
>Mature_273_residues
MIKKAIIPAAGYGTRSLPITKVVPKEMFPIGNKPAIHYIVEEAVKSGIEQILIVVSKRKNLIVDYFDHSLELEAFLEREQ
KSYLLKSFVIPDIQILYTRQPYARGLGEAIKLGEAFIGNEPFAVLLPDDIIISDKSTALNQLIKIYKETKSSVIGVHTVP
NEFLDKYGVVKGDMIKEGYMDITNIVEKPKINPPSNMAVIGRYVFTPDIFSLLQNVQPGVGGEYQLTDAIHSLIAIQKVY
GKIIDGKRFDIGQENDYVHLLNYIHGKNRANTN

Specific function: May Play A Role In Stationary Phase Survival. [C]

COG id: COG1210

COG function: function code M; UDP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UDPGP type 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787488, Length=270, Percent_Identity=42.2222222222222, Blast_Score=192, Evalue=2e-50,
Organism=Escherichia coli, GI1788355, Length=271, Percent_Identity=38.7453874538745, Blast_Score=167, Evalue=6e-43,
Organism=Escherichia coli, GI1788351, Length=227, Percent_Identity=31.7180616740088, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1790224, Length=225, Percent_Identity=30.2222222222222, Blast_Score=85, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6320148, Length=257, Percent_Identity=25.6809338521401, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005835 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.9 [H]

Molecular weight: Translated: 30603; Mature: 30603

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKAIIPAAGYGTRSLPITKVVPKEMFPIGNKPAIHYIVEEAVKSGIEQILIVVSKRKN
CCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
LIVDYFDHSLELEAFLEREQKSYLLKSFVIPDIQILYTRQPYARGLGEAIKLGEAFIGNE
EEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCC
PFAVLLPDDIIISDKSTALNQLIKIYKETKSSVIGVHTVPNEFLDKYGVVKGDMIKEGYM
CEEEECCCCEEECCCHHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHCCCCCCHHHHHHH
DITNIVEKPKINPPSNMAVIGRYVFTPDIFSLLQNVQPGVGGEYQLTDAIHSLIAIQKVY
HHHHHHHCCCCCCCCCCEEEEHHHCCHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHH
GKIIDGKRFDIGQENDYVHLLNYIHGKNRANTN
HHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIKKAIIPAAGYGTRSLPITKVVPKEMFPIGNKPAIHYIVEEAVKSGIEQILIVVSKRKN
CCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
LIVDYFDHSLELEAFLEREQKSYLLKSFVIPDIQILYTRQPYARGLGEAIKLGEAFIGNE
EEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCC
PFAVLLPDDIIISDKSTALNQLIKIYKETKSSVIGVHTVPNEFLDKYGVVKGDMIKEGYM
CEEEECCCCEEECCCHHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHCCCCCCHHHHHHH
DITNIVEKPKINPPSNMAVIGRYVFTPDIFSLLQNVQPGVGGEYQLTDAIHSLIAIQKVY
HHHHHHHCCCCCCCCCCEEEEHHHCCHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHH
GKIIDGKRFDIGQENDYVHLLNYIHGKNRANTN
HHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]