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The map label for this gene is yjhR [C]

Identifier: 152975815

GI number: 152975815

Start: 2173462

End: 2175771

Strand: Reverse

Name: yjhR [C]

Synonym: Bcer98_2072

Alternate gene names: 152975815

Gene position: 2175771-2173462 (Counterclockwise)

Preceding gene: 152975817

Following gene: 152975814

Centisome position: 53.24

GC content: 37.97

Gene sequence:

>2310_bases
ATGTTTGGAGAGAAGGAAGGAGACGATTTTATGAATACAACTCAGCAAACTCCTTCATTAACGGAAACGATGAAAGAGTG
GCATCAAGCGTTAGCTTATGAAATTAAACATTGGAAAACGATAGGTGGAAGTAATATTTCTATCATAAATGGTCGTTTTT
TATATACAGATTATGAAAATACAGTTTACGTATTTCAGCTTATTTCGGAGGTCAGCTTACCTGAAGGTTCACCTATTCGA
ATTGAGTTCGACGGCGAGGAAGCGACCGGGGAAGTATTATCAGCACATGGGTTAGAAATAGAATTGAAATTAAATGATTA
TATTCAAGGTGAAATTAGAGAAGCTGTTTTATACAGTGAACCGTGGCAACTGTTAGAACAACTTCAGGAGCGATTAAAAG
AAGCGAGAAAAGAAAAGCAGAAGCGTCAACGTATAAGACGTTTATTAGATGGAACGAACACGCCGAAGCATATTGAAAAA
ATGAAAAATCCGAAAAATGAATTAGCGTATCGAGCGTTTTACAATGCGACAACATACGTTTGGGGACCACCTGGAACAGG
AAAGTCGTATAATTTATCACGGATTATTTCTGCTCATTATCAAAAAGGAAAATCGGTTCTTGTATTAGCGCATAGTAATG
CGGCAGTGGACGTGTTAATGAGTGAAGTTACGAAGCAAATTGAGAAGAAAAATAAATGGACGCCAGGAGAAATTGTTCGT
TATGGTTTTAGCCAACATGAACATATACGTAATCACGAGACATTACTTGCTTCAAGACTTGTAGAAACGACAAATGGTTC
ATGGGGGGAAGAAAGACTTTATTTAGAAGAGATGCGCCAAGATTTGCGCGAAAAAATACTATCTTATAAAGCGACTGCTT
CTGATAAGAAACGCATGCAAGAAATTGAAAGTGATCTTCGAAAACAGAGAGCGAAAATGAAAGAAGTAGAAAGAGAGTAT
ATTGAAAATGCACAAGTAATTGGTGCAACATTATCAAAATGCGCAATTGATGCGCTGATTTATGAACGTACATTTGATCT
AGTTATAGTAGATGAAGTCAGTATGGCGTATGTTCCGCAAATTGCTTTAGCAGCTGCACTTGGAAAACGAATTGTCATCT
GCGGAGATTTCTTGCAGTTGCCGCCAATCGCAATGGCGAACCATGAACTTGTTCGAAAATGGCTTTGTGAAGATATATTT
TATCATGTGGGAATTGTAGAATCTGTCAATCAATCTGAAGCGCATCCGAATGTATATATGTTGCAGGAACAAAGACGGAT
GCATGCGGATATCGCGAAATTTACAAATTCATTTATATATAAAAATAGAGTCTATGATCATCCGTCTGTTTCAAAGCGTA
AAGAACTAGCAAAGTTACAACCGTTCGCAAACGAGGCAACTGTTTTATTTGATACGAGCCTAATGGGGGCTTATTCTTTA
AAAGATGCTGCTTCCGGATCGCGTTTTAATATGATGTCTGGCTTAGTGGCGATACAAATGATTTTAATTGGAGTATTAGA
TGGTGTTCAATCAATTGGTGTTGTGACGCCGTACCGAGCGCAATCTCGCTTTTTATCAACAGGTATAAGAGAGATGTTGC
AAAAAACGAAATATCGGAATGTACCAGTTTTAGCAGCAACGGTTCATAAATTTCAAGGTTCTGAAAGGGATATGATAATA
TTTGATACGGTTGATAGTTACCCGCAAGAGCGCCCTGGTGTGCTATTTTTTGATCACAAAAATCATCGCCTTGTGAATGT
AGCCGTAACAAGGGCGAGAGGGAAGTTCATTCAGCTGTCAGATTGTCAATATATGCGTAAAAATCTTTCAAGAAAACAAG
CATTATCACAGTTAACCGCTCATATAGAGCGCCACGGAAATGTGTATGATCGCACAACATCACGTCAAATATGGGAGCGG
AAAATTACGAAGCGCTTACGTTGGTTTATGGAAATGAATCTAGAGGAACCAAAAGGGGTACTAAAAGATATTTTGACGGC
AAAACGAAAAATTGTTTTATCGTTGCCAAGTACAAGGAAAATTGATAAGAGAGTATGGCAAGCGTTAATGCGTACGAATG
CACAAGTAACGATTTATAGTGATGGTTCTATTCCGCTAAAAAATGTAAGAGTACAAAGACAAAATAAATCGTTCCCGTTT
TTAGTCATTGATGATGAAATCTTTTGGGCAGGAGCTCCGTTAACATCGCAAATGATGTTTGAAGGGAGTCCGGAATTTCC
GTATATATGTGCAAGACTGGAAGCACCAGAAACAATTGGTGTATTAACAGGATTTTTAGATATTCGGTAA

Upstream 100 bases:

>100_bases
TTCTGAAAATTTTATATATATCATAATATGGAATGTTAAGAAAATAAGCAAGATATAAATCTTACAAATATTAGTGTGAT
ATATGATATAGTGAGAAAGT

Downstream 100 bases:

>100_bases
AATCAGATAGGAATTCCTTGACATTTACTCGGAATAACAATAGAATAAAAATAATTTAATATAATTTTGTGAAAATTCTT
ATCTCGAGAGGTGGAGGGAC

Product: DNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 769; Mature: 769

Protein sequence:

>769_residues
MFGEKEGDDFMNTTQQTPSLTETMKEWHQALAYEIKHWKTIGGSNISIINGRFLYTDYENTVYVFQLISEVSLPEGSPIR
IEFDGEEATGEVLSAHGLEIELKLNDYIQGEIREAVLYSEPWQLLEQLQERLKEARKEKQKRQRIRRLLDGTNTPKHIEK
MKNPKNELAYRAFYNATTYVWGPPGTGKSYNLSRIISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQIEKKNKWTPGEIVR
YGFSQHEHIRNHETLLASRLVETTNGSWGEERLYLEEMRQDLREKILSYKATASDKKRMQEIESDLRKQRAKMKEVEREY
IENAQVIGATLSKCAIDALIYERTFDLVIVDEVSMAYVPQIALAAALGKRIVICGDFLQLPPIAMANHELVRKWLCEDIF
YHVGIVESVNQSEAHPNVYMLQEQRRMHADIAKFTNSFIYKNRVYDHPSVSKRKELAKLQPFANEATVLFDTSLMGAYSL
KDAASGSRFNMMSGLVAIQMILIGVLDGVQSIGVVTPYRAQSRFLSTGIREMLQKTKYRNVPVLAATVHKFQGSERDMII
FDTVDSYPQERPGVLFFDHKNHRLVNVAVTRARGKFIQLSDCQYMRKNLSRKQALSQLTAHIERHGNVYDRTTSRQIWER
KITKRLRWFMEMNLEEPKGVLKDILTAKRKIVLSLPSTRKIDKRVWQALMRTNAQVTIYSDGSIPLKNVRVQRQNKSFPF
LVIDDEIFWAGAPLTSQMMFEGSPEFPYICARLEAPETIGVLTGFLDIR

Sequences:

>Translated_769_residues
MFGEKEGDDFMNTTQQTPSLTETMKEWHQALAYEIKHWKTIGGSNISIINGRFLYTDYENTVYVFQLISEVSLPEGSPIR
IEFDGEEATGEVLSAHGLEIELKLNDYIQGEIREAVLYSEPWQLLEQLQERLKEARKEKQKRQRIRRLLDGTNTPKHIEK
MKNPKNELAYRAFYNATTYVWGPPGTGKSYNLSRIISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQIEKKNKWTPGEIVR
YGFSQHEHIRNHETLLASRLVETTNGSWGEERLYLEEMRQDLREKILSYKATASDKKRMQEIESDLRKQRAKMKEVEREY
IENAQVIGATLSKCAIDALIYERTFDLVIVDEVSMAYVPQIALAAALGKRIVICGDFLQLPPIAMANHELVRKWLCEDIF
YHVGIVESVNQSEAHPNVYMLQEQRRMHADIAKFTNSFIYKNRVYDHPSVSKRKELAKLQPFANEATVLFDTSLMGAYSL
KDAASGSRFNMMSGLVAIQMILIGVLDGVQSIGVVTPYRAQSRFLSTGIREMLQKTKYRNVPVLAATVHKFQGSERDMII
FDTVDSYPQERPGVLFFDHKNHRLVNVAVTRARGKFIQLSDCQYMRKNLSRKQALSQLTAHIERHGNVYDRTTSRQIWER
KITKRLRWFMEMNLEEPKGVLKDILTAKRKIVLSLPSTRKIDKRVWQALMRTNAQVTIYSDGSIPLKNVRVQRQNKSFPF
LVIDDEIFWAGAPLTSQMMFEGSPEFPYICARLEAPETIGVLTGFLDIR
>Mature_769_residues
MFGEKEGDDFMNTTQQTPSLTETMKEWHQALAYEIKHWKTIGGSNISIINGRFLYTDYENTVYVFQLISEVSLPEGSPIR
IEFDGEEATGEVLSAHGLEIELKLNDYIQGEIREAVLYSEPWQLLEQLQERLKEARKEKQKRQRIRRLLDGTNTPKHIEK
MKNPKNELAYRAFYNATTYVWGPPGTGKSYNLSRIISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQIEKKNKWTPGEIVR
YGFSQHEHIRNHETLLASRLVETTNGSWGEERLYLEEMRQDLREKILSYKATASDKKRMQEIESDLRKQRAKMKEVEREY
IENAQVIGATLSKCAIDALIYERTFDLVIVDEVSMAYVPQIALAAALGKRIVICGDFLQLPPIAMANHELVRKWLCEDIF
YHVGIVESVNQSEAHPNVYMLQEQRRMHADIAKFTNSFIYKNRVYDHPSVSKRKELAKLQPFANEATVLFDTSLMGAYSL
KDAASGSRFNMMSGLVAIQMILIGVLDGVQSIGVVTPYRAQSRFLSTGIREMLQKTKYRNVPVLAATVHKFQGSERDMII
FDTVDSYPQERPGVLFFDHKNHRLVNVAVTRARGKFIQLSDCQYMRKNLSRKQALSQLTAHIERHGNVYDRTTSRQIWER
KITKRLRWFMEMNLEEPKGVLKDILTAKRKIVLSLPSTRKIDKRVWQALMRTNAQVTIYSDGSIPLKNVRVQRQNKSFPF
LVIDDEIFWAGAPLTSQMMFEGSPEFPYICARLEAPETIGVLTGFLDIR

Specific function: Unknown

COG id: COG1112

COG function: function code L; Superfamily I DNA and RNA helicases and helicase subunits

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA2/NAM7 helicase family [H]

Homologues:

Organism=Homo sapiens, GI119392094, Length=468, Percent_Identity=26.2820512820513, Blast_Score=103, Evalue=5e-22,
Organism=Homo sapiens, GI18375673, Length=437, Percent_Identity=25.629290617849, Blast_Score=99, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71981659, Length=446, Percent_Identity=25.7847533632287, Blast_Score=100, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17510163, Length=463, Percent_Identity=26.5658747300216, Blast_Score=91, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17533987, Length=347, Percent_Identity=25.6484149855908, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17533985, Length=347, Percent_Identity=25.6484149855908, Blast_Score=71, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322835, Length=497, Percent_Identity=25.5533199195171, Blast_Score=94, Evalue=6e-20,
Organism=Saccharomyces cerevisiae, GI6323462, Length=494, Percent_Identity=24.4939271255061, Blast_Score=85, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6323726, Length=466, Percent_Identity=24.0343347639485, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI18859757, Length=447, Percent_Identity=25.9507829977629, Blast_Score=106, Evalue=6e-23,
Organism=Drosophila melanogaster, GI221330969, Length=463, Percent_Identity=22.8941684665227, Blast_Score=82, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24660647, Length=459, Percent_Identity=22.8758169934641, Blast_Score=81, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR004483 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88542; Mature: 88542

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGEKEGDDFMNTTQQTPSLTETMKEWHQALAYEIKHWKTIGGSNISIINGRFLYTDYEN
CCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEEEECCCC
TVYVFQLISEVSLPEGSPIRIEFDGEEATGEVLSAHGLEIELKLNDYIQGEIREAVLYSE
CCHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHCCCEEEEEECCHHHHHHHHHHHHCC
PWQLLEQLQERLKEARKEKQKRQRIRRLLDGTNTPKHIEKMKNPKNELAYRAFYNATTYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHEECCEEEE
WGPPGTGKSYNLSRIISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQIEKKNKWTPGEIVR
ECCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHH
YGFSQHEHIRNHETLLASRLVETTNGSWGEERLYLEEMRQDLREKILSYKATASDKKRMQ
HCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
EIESDLRKQRAKMKEVEREYIENAQVIGATLSKCAIDALIYERTFDLVIVDEVSMAYVPQ
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHH
IALAAALGKRIVICGDFLQLPPIAMANHELVRKWLCEDIFYHVGIVESVNQSEAHPNVYM
HHHHHHHCCEEEEEECHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
LQEQRRMHADIAKFTNSFIYKNRVYDHPSVSKRKELAKLQPFANEATVLFDTSLMGAYSL
EHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECHHHCCHHH
KDAASGSRFNMMSGLVAIQMILIGVLDGVQSIGVVTPYRAQSRFLSTGIREMLQKTKYRN
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
VPVLAATVHKFQGSERDMIIFDTVDSYPQERPGVLFFDHKNHRLVNVAVTRARGKFIQLS
CCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCEEEEC
DCQYMRKNLSRKQALSQLTAHIERHGNVYDRTTSRQIWERKITKRLRWFMEMNLEEPKGV
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LKDILTAKRKIVLSLPSTRKIDKRVWQALMRTNAQVTIYSDGSIPLKNVRVQRQNKSFPF
HHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHCEEEECCCCCCE
LVIDDEIFWAGAPLTSQMMFEGSPEFPYICARLEAPETIGVLTGFLDIR
EEEECCEEECCCCHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MFGEKEGDDFMNTTQQTPSLTETMKEWHQALAYEIKHWKTIGGSNISIINGRFLYTDYEN
CCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEEEECCCC
TVYVFQLISEVSLPEGSPIRIEFDGEEATGEVLSAHGLEIELKLNDYIQGEIREAVLYSE
CCHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHCCCEEEEEECCHHHHHHHHHHHHCC
PWQLLEQLQERLKEARKEKQKRQRIRRLLDGTNTPKHIEKMKNPKNELAYRAFYNATTYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHEECCEEEE
WGPPGTGKSYNLSRIISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQIEKKNKWTPGEIVR
ECCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHH
YGFSQHEHIRNHETLLASRLVETTNGSWGEERLYLEEMRQDLREKILSYKATASDKKRMQ
HCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
EIESDLRKQRAKMKEVEREYIENAQVIGATLSKCAIDALIYERTFDLVIVDEVSMAYVPQ
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHH
IALAAALGKRIVICGDFLQLPPIAMANHELVRKWLCEDIFYHVGIVESVNQSEAHPNVYM
HHHHHHHCCEEEEEECHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
LQEQRRMHADIAKFTNSFIYKNRVYDHPSVSKRKELAKLQPFANEATVLFDTSLMGAYSL
EHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECHHHCCHHH
KDAASGSRFNMMSGLVAIQMILIGVLDGVQSIGVVTPYRAQSRFLSTGIREMLQKTKYRN
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
VPVLAATVHKFQGSERDMIIFDTVDSYPQERPGVLFFDHKNHRLVNVAVTRARGKFIQLS
CCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCEEEEC
DCQYMRKNLSRKQALSQLTAHIERHGNVYDRTTSRQIWERKITKRLRWFMEMNLEEPKGV
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LKDILTAKRKIVLSLPSTRKIDKRVWQALMRTNAQVTIYSDGSIPLKNVRVQRQNKSFPF
HHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHCEEEECCCCCCE
LVIDDEIFWAGAPLTSQMMFEGSPEFPYICARLEAPETIGVLTGFLDIR
EEEECCEEECCCCHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]