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The map label for this gene is ydeD [C]

Identifier: 152975792

GI number: 152975792

Start: 2147972

End: 2148886

Strand: Reverse

Name: ydeD [C]

Synonym: Bcer98_2043

Alternate gene names: 152975792

Gene position: 2148886-2147972 (Counterclockwise)

Preceding gene: 152975794

Following gene: 152975790

Centisome position: 52.58

GC content: 37.49

Gene sequence:

>915_bases
ATGAAGCGATGGCAAATGGAATGGCTCCTCATATCAGTTGCTTTAGTATGGGGAGCGAACTATACAATTGGAAAATATGG
AGTGGCATATATGTCATCCATTCAATTTAACAGTTTACGGTTTTTAGTAGCTTCTCCAGTATTATTAGTTATTACATTTA
TGTTGGAGCGCTCGTTACGTATTGAAAGAAAAGACTGGCTTAGATTAGTAGTCGTTGGAATTGTTGGAACAACGTTATAT
CAAACGTTATTTATGTTATCTGTCAAATACACTTCAGCAACAAATGCATCATTATTAATCGCAATGTCACCAATTTTTAC
AGGGATTTTAGCAGTATTACACAAACAAGAACGCTTTTCAATGAAAATCCAAGTTGGTTCGGTACTATCGTTTGGCGGGG
CAGCGCTCGTATTATTAACTGGACATACGAGTCAATCTACATATGAGTATGCTTGGCTTGGAAATGGAATCGGACTAGTC
GCTGCCATTGCATGGGGATGGTATCCAATCCTTGCGCAACCACTTATTACAAAGTATTCAGCGATGCGAGTAACTTCTTG
GTCTACATTAATTGGAATTGTACCACTCGTTATATATTGTTTATTCCATGCAAGTGCATTAACATGGCCGGCAGATCTAT
TAAGCTGGGGATCATTAACATATTCAATTGTATTTGCGACCATTTTCGGTCTTGCAATGTGGTACGTTGGCATTAGTCAA
ATTGGTTCTACAAAAGTAATGGTTTATATGTATCTTGTTCCGTTGTTTGCGGTTATTTTTGCAGCGATGACCATCGGAGA
GAGAATAACGATCATGCAGCTAATAGGTGGCCTTGTTATATTTATCGGTTTATATGTTGTGAAAAAAGGAACAATTAAAA
AGTCTTCTTTCCATTTGAACAAGGTGAGTGAATGA

Upstream 100 bases:

>100_bases
TATCGTCATTATAACAAATTGGTTGGGTGAAAAAACAGCCAATTGGATGGTGTAGTGTCCAGCCAATTTTACTATGCTAG
TAGTGGAAGGGGAGATTAAG

Downstream 100 bases:

>100_bases
TGAAAATGACCTCTTGTGCAGAAGAAGCCAATGAAAACGTTTACTTCATAAGAAAAAGGAGTCCATCATCTATATACAGT
AGGTGATGGACTCCTTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MKRWQMEWLLISVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLVITFMLERSLRIERKDWLRLVVVGIVGTTLY
QTLFMLSVKYTSATNASLLIAMSPIFTGILAVLHKQERFSMKIQVGSVLSFGGAALVLLTGHTSQSTYEYAWLGNGIGLV
AAIAWGWYPILAQPLITKYSAMRVTSWSTLIGIVPLVIYCLFHASALTWPADLLSWGSLTYSIVFATIFGLAMWYVGISQ
IGSTKVMVYMYLVPLFAVIFAAMTIGERITIMQLIGGLVIFIGLYVVKKGTIKKSSFHLNKVSE

Sequences:

>Translated_304_residues
MKRWQMEWLLISVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLVITFMLERSLRIERKDWLRLVVVGIVGTTLY
QTLFMLSVKYTSATNASLLIAMSPIFTGILAVLHKQERFSMKIQVGSVLSFGGAALVLLTGHTSQSTYEYAWLGNGIGLV
AAIAWGWYPILAQPLITKYSAMRVTSWSTLIGIVPLVIYCLFHASALTWPADLLSWGSLTYSIVFATIFGLAMWYVGISQ
IGSTKVMVYMYLVPLFAVIFAAMTIGERITIMQLIGGLVIFIGLYVVKKGTIKKSSFHLNKVSE
>Mature_304_residues
MKRWQMEWLLISVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLVITFMLERSLRIERKDWLRLVVVGIVGTTLY
QTLFMLSVKYTSATNASLLIAMSPIFTGILAVLHKQERFSMKIQVGSVLSFGGAALVLLTGHTSQSTYEYAWLGNGIGLV
AAIAWGWYPILAQPLITKYSAMRVTSWSTLIGIVPLVIYCLFHASALTWPADLLSWGSLTYSIVFATIFGLAMWYVGISQ
IGSTKVMVYMYLVPLFAVIFAAMTIGERITIMQLIGGLVIFIGLYVVKKGTIKKSSFHLNKVSE

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI87081929, Length=281, Percent_Identity=27.7580071174377, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33774; Mature: 33774

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRWQMEWLLISVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLVITFMLERSLR
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
IERKDWLRLVVVGIVGTTLYQTLFMLSVKYTSATNASLLIAMSPIFTGILAVLHKQERFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHE
MKIQVGSVLSFGGAALVLLTGHTSQSTYEYAWLGNGIGLVAAIAWGWYPILAQPLITKYS
EEEEECCHHHCCCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
AMRVTSWSTLIGIVPLVIYCLFHASALTWPADLLSWGSLTYSIVFATIFGLAMWYVGISQ
HHEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGSTKVMVYMYLVPLFAVIFAAMTIGERITIMQLIGGLVIFIGLYVVKKGTIKKSSFHLN
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
KVSE
CCCC
>Mature Secondary Structure
MKRWQMEWLLISVALVWGANYTIGKYGVAYMSSIQFNSLRFLVASPVLLVITFMLERSLR
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
IERKDWLRLVVVGIVGTTLYQTLFMLSVKYTSATNASLLIAMSPIFTGILAVLHKQERFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHE
MKIQVGSVLSFGGAALVLLTGHTSQSTYEYAWLGNGIGLVAAIAWGWYPILAQPLITKYS
EEEEECCHHHCCCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
AMRVTSWSTLIGIVPLVIYCLFHASALTWPADLLSWGSLTYSIVFATIFGLAMWYVGISQ
HHEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGSTKVMVYMYLVPLFAVIFAAMTIGERITIMQLIGGLVIFIGLYVVKKGTIKKSSFHLN
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
KVSE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]