Definition Bacillus cereus subsp. cytotoxis NVH 391-98, complete genome.
Accession NC_009674
Length 4,087,024

Click here to switch to the map view.

The map label for this gene is yokD [H]

Identifier: 152975754

GI number: 152975754

Start: 2102190

End: 2102999

Strand: Reverse

Name: yokD [H]

Synonym: Bcer98_2002

Alternate gene names: 152975754

Gene position: 2102999-2102190 (Counterclockwise)

Preceding gene: 152975755

Following gene: 152975753

Centisome position: 51.46

GC content: 39.01

Gene sequence:

>810_bases
ATGATGAAAATAAATGATATAGTAGCGGAAACAGATTTCCCAAATACCATTGAAACGATCACAAATGATTTAAGGAAATT
AGGGATACAGAAAGGAATGACAGTGATTGTACATTCTTCGCTTAGTTCAATAGGATGGGTGTGCGGTGGAGCAGTTGCGG
TGGTGGAAGCATTAATGAACGTAATTACGGAAGAGGGAACGATTGTAATGCCAACGCAAACATCTGATTTGTCGGATCCA
AAAAATTGGGCTCGACCACCAGTTCCAAAAAACTGGTGGTCCATAATTCGTGAGAATGTGCCTGCCTTTCATCCGGATAT
TACTCCAACAAGAGCGATGGGGAAAATTGTAGAGTGTTTTCGTACATACCCAAATGTAAAGCGAAGTAGTCATCCGTTAA
ATAGTTTCGCTGCTTGGGGGAAACATGCAGAATGGATTACAGCGGACCATTCACTGTCATTTAGTTTCGGTGAAGCATCT
CCATTAAAGAAAATATATGATTTAGATGGATATGTATTATTAATAGGAGTTGGCTATGATTCGAATACATCTATTCATTT
ATCAGAAATACGTGCTGGGGCGTGTGAATTTATAAAAGAAGGAGCGCCTATTATTGAAAATGGGGTTAGCGTCTGGAAAG
AGTTTGATGAAATAGACTATGACCCTGAACCATTTGTTAAGATTGGGACAGAATTTGAACAAACAAATGCTGTTCAAATT
GGAAAGATTGGAAATGCAACGTGCAGAGTCATGAAGCAGAGAGAGATTATCGATTATAGTACAGCGTGGCTTCGCTCGAA
AAATAAGTAA

Upstream 100 bases:

>100_bases
TAAGAATTTTATCTTCTAACAGATAAAAAATTAAGAAAAATATGATGAAATGTAAAATATGAGTTTATGTAAGATTTACG
ATAAAATGACCGGAGGAATC

Downstream 100 bases:

>100_bases
GGGATGATTCAAATGAAGGGGAAAAAGATAATAATTACAAGCGGTGGTTGTCTGGAAAAATGGGATCAAGTGCGCGGACA
TACAAATTTAGCAAAAGGAA

Product: aminoglycoside N(3')-acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MMKINDIVAETDFPNTIETITNDLRKLGIQKGMTVIVHSSLSSIGWVCGGAVAVVEALMNVITEEGTIVMPTQTSDLSDP
KNWARPPVPKNWWSIIRENVPAFHPDITPTRAMGKIVECFRTYPNVKRSSHPLNSFAAWGKHAEWITADHSLSFSFGEAS
PLKKIYDLDGYVLLIGVGYDSNTSIHLSEIRAGACEFIKEGAPIIENGVSVWKEFDEIDYDPEPFVKIGTEFEQTNAVQI
GKIGNATCRVMKQREIIDYSTAWLRSKNK

Sequences:

>Translated_269_residues
MMKINDIVAETDFPNTIETITNDLRKLGIQKGMTVIVHSSLSSIGWVCGGAVAVVEALMNVITEEGTIVMPTQTSDLSDP
KNWARPPVPKNWWSIIRENVPAFHPDITPTRAMGKIVECFRTYPNVKRSSHPLNSFAAWGKHAEWITADHSLSFSFGEAS
PLKKIYDLDGYVLLIGVGYDSNTSIHLSEIRAGACEFIKEGAPIIENGVSVWKEFDEIDYDPEPFVKIGTEFEQTNAVQI
GKIGNATCRVMKQREIIDYSTAWLRSKNK
>Mature_269_residues
MMKINDIVAETDFPNTIETITNDLRKLGIQKGMTVIVHSSLSSIGWVCGGAVAVVEALMNVITEEGTIVMPTQTSDLSDP
KNWARPPVPKNWWSIIRENVPAFHPDITPTRAMGKIVECFRTYPNVKRSSHPLNSFAAWGKHAEWITADHSLSFSFGEAS
PLKKIYDLDGYVLLIGVGYDSNTSIHLSEIRAGACEFIKEGAPIIENGVSVWKEFDEIDYDPEPFVKIGTEFEQTNAVQI
GKIGNATCRVMKQREIIDYSTAWLRSKNK

Specific function: May contribute to antibiotic resistance (Potential) [H]

COG id: COG2746

COG function: function code V; Aminoglycoside N3'-acetyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the antibiotic N-acetyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003679 [H]

Pfam domain/function: PF02522 Antibiotic_NAT [H]

EC number: NA

Molecular weight: Translated: 29989; Mature: 29989

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKINDIVAETDFPNTIETITNDLRKLGIQKGMTVIVHSSLSSIGWVCGGAVAVVEALMN
CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCHHHHHHHHHH
VITEEGTIVMPTQTSDLSDPKNWARPPVPKNWWSIIRENVPAFHPDITPTRAMGKIVECF
HHHCCCCEEECCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
RTYPNVKRSSHPLNSFAAWGKHAEWITADHSLSFSFGEASPLKKIYDLDGYVLLIGVGYD
HHCCCCCCCCCCHHHHHHHCCCCCEEECCCCEEECCCCCCHHHHHHCCCCEEEEEEECCC
SNTSIHLSEIRAGACEFIKEGAPIIENGVSVWKEFDEIDYDPEPFVKIGTEFEQTNAVQI
CCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEE
GKIGNATCRVMKQREIIDYSTAWLRSKNK
CCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMKINDIVAETDFPNTIETITNDLRKLGIQKGMTVIVHSSLSSIGWVCGGAVAVVEALMN
CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCHHHHHHHHHH
VITEEGTIVMPTQTSDLSDPKNWARPPVPKNWWSIIRENVPAFHPDITPTRAMGKIVECF
HHHCCCCEEECCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
RTYPNVKRSSHPLNSFAAWGKHAEWITADHSLSFSFGEASPLKKIYDLDGYVLLIGVGYD
HHCCCCCCCCCCHHHHHHHCCCCCEEECCCCEEECCCCCCHHHHHHCCCCEEEEEEECCC
SNTSIHLSEIRAGACEFIKEGAPIIENGVSVWKEFDEIDYDPEPFVKIGTEFEQTNAVQI
CCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEE
GKIGNATCRVMKQREIIDYSTAWLRSKNK
CCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]