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The map label for this gene is gbpA [H]

Identifier: 152975689

GI number: 152975689

Start: 2037407

End: 2038057

Strand: Reverse

Name: gbpA [H]

Synonym: Bcer98_1926

Alternate gene names: 152975689

Gene position: 2038057-2037407 (Counterclockwise)

Preceding gene: 152975690

Following gene: 152975687

Centisome position: 49.87

GC content: 38.56

Gene sequence:

>651_bases
ATGAAAAAGAAAAAATGGCAAAGTATGAAGAAAGTTATTCTCAGTTGTGGAATTATACTAACAGGAGTGATAACATTTGG
TTTTGCAGAAAAGGCGTCTGCACATGGGTATGTGGAATCACCTTCTAGTCGTTCGTATTTATGCAGCAAAGGTGTAAATG
TAAATTGTGGTCCAATTCAATATGAACCGCAAAGTGTAGAAGGAGTAGGGGGATTTCCGCAATCAGGTCCAGTTGATGGA
CAAATTGCGGGTGCTGGAAATTTCCCGAATTTAGACGTCCAAACCGCTGAGCGATGGAAAAAAGTAACGATTCAAGGGGG
AAAGAATGAATTCAAGTGGAAATTAACTGCTCCGCATAGTACGAAAGAGTGGAAATATTATATAACGAAAAAAGATTGGA
ACCCGAATAAGCCATTGTCACGTTCTCAATTAGATTTAATACCATTCTATGTGAAAAATGATGGGGGAGTAAAACCAGGA
GTAACAGTAACGCATGAAGCAAATGTACCAACTGATCGCAGTGGATACCATCTTATTTTAGCTGTTTGGGAAATTGCGGA
TACAGGGAATGCCTTTTATCAAGTAATGGATGTAAATCTTGTTAATAATGGCGTTACGTCTATCATGCATCATGCTTCAC
ACGACAATTAA

Upstream 100 bases:

>100_bases
TCTATGGACAAGTTCCCTTCGTTTATACTTGATGTAGAGAAGATGACTAGGCAACTTAAGCAGAGTTATTTTCGTTTATG
GATAGGGAGGGAACCGCGTG

Downstream 100 bases:

>100_bases
ATCAAATAAAGAAAGGTCATTTTTGTATAGAATGACCTTTCTTCACGTCTGACTGGAAGCGAATGTTTTCGACACAGCAA
CTACTTCTTTGGCATAGCAT

Product: chitin-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKKKKWQSMKKVILSCGIILTGVITFGFAEKASAHGYVESPSSRSYLCSKGVNVNCGPIQYEPQSVEGVGGFPQSGPVDG
QIAGAGNFPNLDVQTAERWKKVTIQGGKNEFKWKLTAPHSTKEWKYYITKKDWNPNKPLSRSQLDLIPFYVKNDGGVKPG
VTVTHEANVPTDRSGYHLILAVWEIADTGNAFYQVMDVNLVNNGVTSIMHHASHDN

Sequences:

>Translated_216_residues
MKKKKWQSMKKVILSCGIILTGVITFGFAEKASAHGYVESPSSRSYLCSKGVNVNCGPIQYEPQSVEGVGGFPQSGPVDG
QIAGAGNFPNLDVQTAERWKKVTIQGGKNEFKWKLTAPHSTKEWKYYITKKDWNPNKPLSRSQLDLIPFYVKNDGGVKPG
VTVTHEANVPTDRSGYHLILAVWEIADTGNAFYQVMDVNLVNNGVTSIMHHASHDN
>Mature_216_residues
MKKKKWQSMKKVILSCGIILTGVITFGFAEKASAHGYVESPSSRSYLCSKGVNVNCGPIQYEPQSVEGVGGFPQSGPVDG
QIAGAGNFPNLDVQTAERWKKVTIQGGKNEFKWKLTAPHSTKEWKYYITKKDWNPNKPLSRSQLDLIPFYVKNDGGVKPG
VTVTHEANVPTDRSGYHLILAVWEIADTGNAFYQVMDVNLVNNGVTSIMHHASHDN

Specific function: Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin [H]

COG id: COG3397

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 chitin-binding type-4 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004302
- InterPro:   IPR020879
- InterPro:   IPR014756 [H]

Pfam domain/function: PF03067 Chitin_bind_3 [H]

EC number: NA

Molecular weight: Translated: 23810; Mature: 23810

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKKWQSMKKVILSCGIILTGVITFGFAEKASAHGYVESPSSRSYLCSKGVNVNCGPIQ
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCEE
YEPQSVEGVGGFPQSGPVDGQIAGAGNFPNLDVQTAERWKKVTIQGGKNEFKWKLTAPHS
ECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHCCEEEEEEECCCCEEEEEEECCCC
TKEWKYYITKKDWNPNKPLSRSQLDLIPFYVKNDGGVKPGVTVTHEANVPTDRSGYHLIL
CCCEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEEE
AVWEIADTGNAFYQVMDVNLVNNGVTSIMHHASHDN
EEEEECCCCCEEEEEEEEEEHHCHHHHHHHHCCCCC
>Mature Secondary Structure
MKKKKWQSMKKVILSCGIILTGVITFGFAEKASAHGYVESPSSRSYLCSKGVNVNCGPIQ
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCEE
YEPQSVEGVGGFPQSGPVDGQIAGAGNFPNLDVQTAERWKKVTIQGGKNEFKWKLTAPHS
ECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHCCEEEEEEECCCCEEEEEEECCCC
TKEWKYYITKKDWNPNKPLSRSQLDLIPFYVKNDGGVKPGVTVTHEANVPTDRSGYHLIL
CCCEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEEE
AVWEIADTGNAFYQVMDVNLVNNGVTSIMHHASHDN
EEEEECCCCCEEEEEEEEEEHHCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]