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The map label for this gene is ypvA [H]

Identifier: 152975100

GI number: 152975100

Start: 1405621

End: 1407558

Strand: Direct

Name: ypvA [H]

Synonym: Bcer98_1300

Alternate gene names: 152975100

Gene position: 1405621-1407558 (Clockwise)

Preceding gene: 152975099

Following gene: 152975101

Centisome position: 34.39

GC content: 35.96

Gene sequence:

>1938_bases
ATGTTTACTAAGAAGAGATTACCATTTGAAGTAGGGAAACAAGATAATTTTTATGATAAGTTGAATGAGTGGATTGGAGA
TGTATTTTACGATATCCTCCCAGAAAAAGGTTTTGAAGAGCGCGATGAACAAATTTTTATGGCGTTTCAATTAGAACGAG
CGTTTCAAGAGAAGAAGGTTATGTTTGCTGAGGCTGGTGTTGGAACAGGGAAAACAATTGTATATCTTTTATATGCAATT
TGTTATGCACGTTATACAGGAAAGCCGGCTATTATCGCTTGTGCAGATGAAACGCTAATTGAACAGCTTGTAAAAGAAGA
AGGGGACATCGCGAAGTTATCAGAAGCGTTAGGGTTATCTGTTGATGTTAGACTTGCAAAATCAATGGATAATTATTTAT
GTTTACGTAAACTAGAAGATGTAATGAGTGGACGAGCTCCAGAAGTAATTGAAGATTTATATTATGAATTGCCGCAATTT
GTATTTGATCACGGAACAATGCAAAATTTTACACCATATGGAGATCGTAAAGAGTTTCCGCTATTAAATGATGAAGAGTG
GTCAAAAGTATCTTGGGATTATTTCCAAGATTGTTTCACATGTGAATCTCGCCATCGCTGCGGTCAAACGCTTTCTCGTG
AACATTACCGTAAAGCAGCAGATTTAATTATTTGTTCTCAAGATTTCTATATGGACCACATTTGGACATATGATGCTCGT
AAGCGTGAAGGACAGATGCCGCTTCTACCAGAAAGTAGCTGTGTCGTTTTTGATGAAGGACATTTGGTTGAATATGCAGC
GCAAAAAGCACTAACGTATCGATTAAAGCAAACGATGATGGAACAATTATTAACAAGATTGTTGCAAAATGATATTCGTG
AAGAATTTGCTCATTTAATAGAAGAAACAATTTGGCAGACAGAACGTTTCTTTGATGTTTTACAAGAGAATAAACAAGAA
ATTCCAGGGTCAGATCGTTTGGAAATTACGGTAACAGAAAAAGTGACTACAGAAGCAAAACGATTATATGCCAAAATTGC
TGAAGTCGGCGATGCATTGGTATTTGAAAGTGAAATGTATACAGTCAACACATATGATTTAAATATTGTTGACGAGCATT
TAGATGTACTGGAACATTCACTTCGTCTTTTCATGCATGAAAAAAATGCGATTACGTGGGGAGAAGAAGGGGATGGAACA
TTTACATTAGTTATTATGCCACGTGCAGTAGAAGAAGTATTACAAGAGAAAGTATTCTCTAAAAAAATCCCGTATATTTT
CTCTTCTGCTACATTATCTGAAAATGGTTCATTTGCATTTACCGCAAATAGTCTCGGCATAAAAGATTATCTATCGTTCT
CGGTTGCTTCTCCATTTGATTATGAAGAACAAATGAAAGTGTATTTACCATCCTATAATGAAGAAAATGCATGGGAAAGA
AAGTGTCAATATATACTTGAAAATATTCAAAAAACCAATGGACGTACACTTGTATTGTTCCGAACAACTGAGGAGCTTGC
TGTCCTTAAAGAATACGTAAGCAAAGAACAAATGTCTATTCCGTTCTTATATGAGGGAGATCAAGAAATTAGTCAGCTCG
TTTCACGTTTCCAAAATGAAGAAGAGACTGTCCTTTGTGCTGTTCATTTATGGGAAGGGTTAGATATTCCTGGTTCATCA
TTATCACATGTCATTATTTGGTCGCTTCCATTCCCTCCAAATGACCCTGTGTTTGAAGCGAAACGAAAACATGTAAATGA
TTCATTTTGGAACGTAGATGTACCATATATGATTTTACGACTTCGTCAAGGAATTGGACGCTTAATTCGTACAAGTGAGG
ACAAAGGAGCGATTTCGTTATTCTTGTCTGAAAATGAGAATGAAAAGGTTGTCGAAGCTGTAAAGAAAGTACTGCCAGTA
GAAGGAATAATGATCTAA

Upstream 100 bases:

>100_bases
CACGCATTTCTATGTATTACAACAGGGGAAAGCAACTGCTATTTATAAGTAGCAGTTGCTATATCTTTTTATAGAAAAAC
TTTTTGGTTGGAGGCTAAGC

Downstream 100 bases:

>100_bases
CGAAAAAAGCTTGGTCAATGCCAAGCTTTTTTCTATAGGGAGAAAAGGAATTTATCTATTTATGTCGAAATAAAGGGGAG
ATAGAAAAAGGAGGGAATGA

Product: helicase c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 645; Mature: 645

Protein sequence:

>645_residues
MFTKKRLPFEVGKQDNFYDKLNEWIGDVFYDILPEKGFEERDEQIFMAFQLERAFQEKKVMFAEAGVGTGKTIVYLLYAI
CYARYTGKPAIIACADETLIEQLVKEEGDIAKLSEALGLSVDVRLAKSMDNYLCLRKLEDVMSGRAPEVIEDLYYELPQF
VFDHGTMQNFTPYGDRKEFPLLNDEEWSKVSWDYFQDCFTCESRHRCGQTLSREHYRKAADLIICSQDFYMDHIWTYDAR
KREGQMPLLPESSCVVFDEGHLVEYAAQKALTYRLKQTMMEQLLTRLLQNDIREEFAHLIEETIWQTERFFDVLQENKQE
IPGSDRLEITVTEKVTTEAKRLYAKIAEVGDALVFESEMYTVNTYDLNIVDEHLDVLEHSLRLFMHEKNAITWGEEGDGT
FTLVIMPRAVEEVLQEKVFSKKIPYIFSSATLSENGSFAFTANSLGIKDYLSFSVASPFDYEEQMKVYLPSYNEENAWER
KCQYILENIQKTNGRTLVLFRTTEELAVLKEYVSKEQMSIPFLYEGDQEISQLVSRFQNEEETVLCAVHLWEGLDIPGSS
LSHVIIWSLPFPPNDPVFEAKRKHVNDSFWNVDVPYMILRLRQGIGRLIRTSEDKGAISLFLSENENEKVVEAVKKVLPV
EGIMI

Sequences:

>Translated_645_residues
MFTKKRLPFEVGKQDNFYDKLNEWIGDVFYDILPEKGFEERDEQIFMAFQLERAFQEKKVMFAEAGVGTGKTIVYLLYAI
CYARYTGKPAIIACADETLIEQLVKEEGDIAKLSEALGLSVDVRLAKSMDNYLCLRKLEDVMSGRAPEVIEDLYYELPQF
VFDHGTMQNFTPYGDRKEFPLLNDEEWSKVSWDYFQDCFTCESRHRCGQTLSREHYRKAADLIICSQDFYMDHIWTYDAR
KREGQMPLLPESSCVVFDEGHLVEYAAQKALTYRLKQTMMEQLLTRLLQNDIREEFAHLIEETIWQTERFFDVLQENKQE
IPGSDRLEITVTEKVTTEAKRLYAKIAEVGDALVFESEMYTVNTYDLNIVDEHLDVLEHSLRLFMHEKNAITWGEEGDGT
FTLVIMPRAVEEVLQEKVFSKKIPYIFSSATLSENGSFAFTANSLGIKDYLSFSVASPFDYEEQMKVYLPSYNEENAWER
KCQYILENIQKTNGRTLVLFRTTEELAVLKEYVSKEQMSIPFLYEGDQEISQLVSRFQNEEETVLCAVHLWEGLDIPGSS
LSHVIIWSLPFPPNDPVFEAKRKHVNDSFWNVDVPYMILRLRQGIGRLIRTSEDKGAISLFLSENENEKVVEAVKKVLPV
EGIMI
>Mature_645_residues
MFTKKRLPFEVGKQDNFYDKLNEWIGDVFYDILPEKGFEERDEQIFMAFQLERAFQEKKVMFAEAGVGTGKTIVYLLYAI
CYARYTGKPAIIACADETLIEQLVKEEGDIAKLSEALGLSVDVRLAKSMDNYLCLRKLEDVMSGRAPEVIEDLYYELPQF
VFDHGTMQNFTPYGDRKEFPLLNDEEWSKVSWDYFQDCFTCESRHRCGQTLSREHYRKAADLIICSQDFYMDHIWTYDAR
KREGQMPLLPESSCVVFDEGHLVEYAAQKALTYRLKQTMMEQLLTRLLQNDIREEFAHLIEETIWQTERFFDVLQENKQE
IPGSDRLEITVTEKVTTEAKRLYAKIAEVGDALVFESEMYTVNTYDLNIVDEHLDVLEHSLRLFMHEKNAITWGEEGDGT
FTLVIMPRAVEEVLQEKVFSKKIPYIFSSATLSENGSFAFTANSLGIKDYLSFSVASPFDYEEQMKVYLPSYNEENAWER
KCQYILENIQKTNGRTLVLFRTTEELAVLKEYVSKEQMSIPFLYEGDQEISQLVSRFQNEEETVLCAVHLWEGLDIPGSS
LSHVIIWSLPFPPNDPVFEAKRKHVNDSFWNVDVPYMILRLRQGIGRLIRTSEDKGAISLFLSENENEKVVEAVKKVLPV
EGIMI

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=610, Percent_Identity=26.5573770491803, Blast_Score=175, Evalue=8e-45,
Organism=Escherichia coli, GI1787018, Length=708, Percent_Identity=24.2937853107345, Blast_Score=94, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014013
- InterPro:   IPR006555 [H]

Pfam domain/function: NA

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 74930; Mature: 74930

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTKKRLPFEVGKQDNFYDKLNEWIGDVFYDILPEKGFEERDEQIFMAFQLERAFQEKKV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHE
MFAEAGVGTGKTIVYLLYAICYARYTGKPAIIACADETLIEQLVKEEGDIAKLSEALGLS
EEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHCCC
VDVRLAKSMDNYLCLRKLEDVMSGRAPEVIEDLYYELPQFVFDHGTMQNFTPYGDRKEFP
EEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
LLNDEEWSKVSWDYFQDCFTCESRHRCGQTLSREHYRKAADLIICSQDFYMDHIWTYDAR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHEEECCCH
KREGQMPLLPESSCVVFDEGHLVEYAAQKALTYRLKQTMMEQLLTRLLQNDIREEFAHLI
HCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EETIWQTERFFDVLQENKQEIPGSDRLEITVTEKVTTEAKRLYAKIAEVGDALVFESEMY
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCEEEECCEE
TVNTYDLNIVDEHLDVLEHSLRLFMHEKNAITWGEEGDGTFTLVIMPRAVEEVLQEKVFS
EEEEEEEEHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEEEECHHHHHHHHHHHHH
KKIPYIFSSATLSENGSFAFTANSLGIKDYLSFSVASPFDYEEQMKVYLPSYNEENAWER
HCCCCEEECCEECCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHH
KCQYILENIQKTNGRTLVLFRTTEELAVLKEYVSKEQMSIPFLYEGDQEISQLVSRFQNE
HHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCC
EETVLCAVHLWEGLDIPGSSLSHVIIWSLPFPPNDPVFEAKRKHVNDSFWNVDVPYMILR
CCEEEEEEEHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
LRQGIGRLIRTSEDKGAISLFLSENENEKVVEAVKKVLPVEGIMI
HHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MFTKKRLPFEVGKQDNFYDKLNEWIGDVFYDILPEKGFEERDEQIFMAFQLERAFQEKKV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHE
MFAEAGVGTGKTIVYLLYAICYARYTGKPAIIACADETLIEQLVKEEGDIAKLSEALGLS
EEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHCCC
VDVRLAKSMDNYLCLRKLEDVMSGRAPEVIEDLYYELPQFVFDHGTMQNFTPYGDRKEFP
EEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
LLNDEEWSKVSWDYFQDCFTCESRHRCGQTLSREHYRKAADLIICSQDFYMDHIWTYDAR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHEEECCCH
KREGQMPLLPESSCVVFDEGHLVEYAAQKALTYRLKQTMMEQLLTRLLQNDIREEFAHLI
HCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EETIWQTERFFDVLQENKQEIPGSDRLEITVTEKVTTEAKRLYAKIAEVGDALVFESEMY
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCEEEECCEE
TVNTYDLNIVDEHLDVLEHSLRLFMHEKNAITWGEEGDGTFTLVIMPRAVEEVLQEKVFS
EEEEEEEEHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEEEECHHHHHHHHHHHHH
KKIPYIFSSATLSENGSFAFTANSLGIKDYLSFSVASPFDYEEQMKVYLPSYNEENAWER
HCCCCEEECCEECCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHH
KCQYILENIQKTNGRTLVLFRTTEELAVLKEYVSKEQMSIPFLYEGDQEISQLVSRFQNE
HHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCC
EETVLCAVHLWEGLDIPGSSLSHVIIWSLPFPPNDPVFEAKRKHVNDSFWNVDVPYMILR
CCEEEEEEEHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
LRQGIGRLIRTSEDKGAISLFLSENENEKVVEAVKKVLPVEGIMI
HHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]