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The map label for this gene is ypiA [H]

Identifier: 152975043

GI number: 152975043

Start: 1354024

End: 1355286

Strand: Direct

Name: ypiA [H]

Synonym: Bcer98_1243

Alternate gene names: 152975043

Gene position: 1354024-1355286 (Clockwise)

Preceding gene: 152975042

Following gene: 152975044

Centisome position: 33.13

GC content: 35.63

Gene sequence:

>1263_bases
ATGCAAAAGTTTGAACAAGCTGTTTCCTATATTGAAAATGGAGAGGTAGAAAAAGGTTTACAGCAATTAAAAGAACAGGT
GAAGCAAGGGACGGACGAGGAGAAATACGATATTGCTCGCTATTATCATACACTTGGGTTTGTAGATGAAGCGCTCGCGA
TTGCAGAGGATTTACACCTTCTATATCCTGAAGAAAGTGAATTTACAATATTTTTAGCAGAGCTATATATTGATTTAGAT
AAAGAAGATGAAGCAATTGAGGTACTTCATGATATTCCTGAAGATGACGATTTTTATGTACAATCTTTATTACTTGTTGC
GGATTTATTCCAAATGCAAGGATTTGATGATGTTGCCGAACAAAAACTATTAAAGGCGAAAGAAATCATGCCAGAAGAGC
CTGTCATTATATTTGGTCTTGCTGAATTGTATAGCAGTAAAGGAGAAGAGAAAAAGGCGATTCAGTATTATCAATCATTA
CTTGCCGAACATAAAGTAATGGGAGGCGTTATTATCGCTCTTCGCCTTGCAGAAACGTTAAGTGCGGTTGGAAATTGGGA
AGAAGCAATCCCTTATTATGAAGAAGGATTAGAAGAACAGAAAGATATTCATTCTTTATTCGGATATGCATTTACTCTTT
ATCAAGGAGAAGAATATCCACGAGCGATTAGTGTTTGGCAAGAATTGAAGGAATTAGATCCAGAATATGCATCATTATAT
ATGTATTTGGCGAAATGCTACGAAAAAGAAGGGATGCTTCAAGAAAGCTATGAAACACTTCACGATGGTATTAAAGTCGA
TGAGTTATCTGTGCCGCTTTATGTAGAATTGGCAAATATTGCAGCGAAGCTAGGAAAGATGGCGGAAGCAGAGGAAGTTC
TTCAAAAGGCTCTGCGATTAGATCCAGGACATTTAGGAGCAATATTAAAATATGTCTATATCTTAAAAGGGCAAGAAAAA
TACGAAGAATTAATTCGTGTTGTAGAAAATGCAAGAGAAAGTGGAGAGCAGGATGCGCAATTACTTTGGGATCTTGCATT
TGCTAAAAAACAATTAGAAATGTATTCGGATGCATTAAAACACTATGAAAGTGCATATACTTCTTTTAAGAATCATCCCG
ATTTCTTGGAAGAGTACGGTTACTTCTTATTAGAAGAAGGGATGCGAAAAGAGGCGAAAGAAGTATTTACACGCTTAATA
CAACTAGATCCGACACAAATTCATATTGAGGAATTGTTATATAATTTAGAGGATTTTTCATAA

Upstream 100 bases:

>100_bases
TGAGAAAATTCTTTTCCATTTCTTTTAGTTGCTTAGTAGTCAACTGTTGTTTATGATTAAGTGAATAGATGAGAATATTT
TTAGGTTAAAGGAGATATAT

Downstream 100 bases:

>100_bases
GTTGGAAGGAAACTGAATGCTACTTCTTGAATCTAAATAAAAAAAAGAAAGACAGAGGAGGGACTTAGGCGCTATGAATA
CCCCTGTTTCTGTAAACGAG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MQKFEQAVSYIENGEVEKGLQQLKEQVKQGTDEEKYDIARYYHTLGFVDEALAIAEDLHLLYPEESEFTIFLAELYIDLD
KEDEAIEVLHDIPEDDDFYVQSLLLVADLFQMQGFDDVAEQKLLKAKEIMPEEPVIIFGLAELYSSKGEEKKAIQYYQSL
LAEHKVMGGVIIALRLAETLSAVGNWEEAIPYYEEGLEEQKDIHSLFGYAFTLYQGEEYPRAISVWQELKELDPEYASLY
MYLAKCYEKEGMLQESYETLHDGIKVDELSVPLYVELANIAAKLGKMAEAEEVLQKALRLDPGHLGAILKYVYILKGQEK
YEELIRVVENARESGEQDAQLLWDLAFAKKQLEMYSDALKHYESAYTSFKNHPDFLEEYGYFLLEEGMRKEAKEVFTRLI
QLDPTQIHIEELLYNLEDFS

Sequences:

>Translated_420_residues
MQKFEQAVSYIENGEVEKGLQQLKEQVKQGTDEEKYDIARYYHTLGFVDEALAIAEDLHLLYPEESEFTIFLAELYIDLD
KEDEAIEVLHDIPEDDDFYVQSLLLVADLFQMQGFDDVAEQKLLKAKEIMPEEPVIIFGLAELYSSKGEEKKAIQYYQSL
LAEHKVMGGVIIALRLAETLSAVGNWEEAIPYYEEGLEEQKDIHSLFGYAFTLYQGEEYPRAISVWQELKELDPEYASLY
MYLAKCYEKEGMLQESYETLHDGIKVDELSVPLYVELANIAAKLGKMAEAEEVLQKALRLDPGHLGAILKYVYILKGQEK
YEELIRVVENARESGEQDAQLLWDLAFAKKQLEMYSDALKHYESAYTSFKNHPDFLEEYGYFLLEEGMRKEAKEVFTRLI
QLDPTQIHIEELLYNLEDFS
>Mature_420_residues
MQKFEQAVSYIENGEVEKGLQQLKEQVKQGTDEEKYDIARYYHTLGFVDEALAIAEDLHLLYPEESEFTIFLAELYIDLD
KEDEAIEVLHDIPEDDDFYVQSLLLVADLFQMQGFDDVAEQKLLKAKEIMPEEPVIIFGLAELYSSKGEEKKAIQYYQSL
LAEHKVMGGVIIALRLAETLSAVGNWEEAIPYYEEGLEEQKDIHSLFGYAFTLYQGEEYPRAISVWQELKELDPEYASLY
MYLAKCYEKEGMLQESYETLHDGIKVDELSVPLYVELANIAAKLGKMAEAEEVLQKALRLDPGHLGAILKYVYILKGQEK
YEELIRVVENARESGEQDAQLLWDLAFAKKQLEMYSDALKHYESAYTSFKNHPDFLEEYGYFLLEEGMRKEAKEVFTRLI
QLDPTQIHIEELLYNLEDFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 9 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307150, Length=302, Percent_Identity=24.5033112582781, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI32307148, Length=302, Percent_Identity=24.5033112582781, Blast_Score=69, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 48670; Mature: 48670

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKFEQAVSYIENGEVEKGLQQLKEQVKQGTDEEKYDIARYYHTLGFVDEALAIAEDLHL
CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYPEESEFTIFLAELYIDLDKEDEAIEVLHDIPEDDDFYVQSLLLVADLFQMQGFDDVAE
CCCCCCCCEEEHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
QKLLKAKEIMPEEPVIIFGLAELYSSKGEEKKAIQYYQSLLAEHKVMGGVIIALRLAETL
HHHHHHHHCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVGNWEEAIPYYEEGLEEQKDIHSLFGYAFTLYQGEEYPRAISVWQELKELDPEYASLY
HHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHH
MYLAKCYEKEGMLQESYETLHDGIKVDELSVPLYVELANIAAKLGKMAEAEEVLQKALRL
HHHHHHHHHCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DPGHLGAILKYVYILKGQEKYEELIRVVENARESGEQDAQLLWDLAFAKKQLEMYSDALK
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
HYESAYTSFKNHPDFLEEYGYFLLEEGMRKEAKEVFTRLIQLDPTQIHIEELLYNLEDFS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQKFEQAVSYIENGEVEKGLQQLKEQVKQGTDEEKYDIARYYHTLGFVDEALAIAEDLHL
CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYPEESEFTIFLAELYIDLDKEDEAIEVLHDIPEDDDFYVQSLLLVADLFQMQGFDDVAE
CCCCCCCCEEEHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
QKLLKAKEIMPEEPVIIFGLAELYSSKGEEKKAIQYYQSLLAEHKVMGGVIIALRLAETL
HHHHHHHHCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVGNWEEAIPYYEEGLEEQKDIHSLFGYAFTLYQGEEYPRAISVWQELKELDPEYASLY
HHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHH
MYLAKCYEKEGMLQESYETLHDGIKVDELSVPLYVELANIAAKLGKMAEAEEVLQKALRL
HHHHHHHHHCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DPGHLGAILKYVYILKGQEKYEELIRVVENARESGEQDAQLLWDLAFAKKQLEMYSDALK
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
HYESAYTSFKNHPDFLEEYGYFLLEEGMRKEAKEVFTRLIQLDPTQIHIEELLYNLEDFS
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]