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The map label for this gene is ypdA [H]

Identifier: 152975017

GI number: 152975017

Start: 1330216

End: 1331199

Strand: Direct

Name: ypdA [H]

Synonym: Bcer98_1217

Alternate gene names: 152975017

Gene position: 1330216-1331199 (Clockwise)

Preceding gene: 152975016

Following gene: 152975019

Centisome position: 32.55

GC content: 38.11

Gene sequence:

>984_bases
ATGCAAAAAGAAGCAGCGATTATCATCGGGGGCGGACCTTGTGGGTTGGCAGCGGCAATTTCTTTGCAGGAAGCTGGAAT
CAACGCGTTAGTAATTGAAAAAGGGAATATCGTAAATGCAATTTATCATTATCCAACTCATCAAACATTCTTTTCATCTA
GTGAAAAATTAGAAATTGGTGATGTAGCTTTTATTACAGAAAATCGGAAACCAGTGCGTAATCAAGCGCTTGCCTATTAT
CGTGAAGTAGTGAAACGAAAAGGTGTGCGTGTACATGCATTTGAGCGTGTTGAACAAGTACAAAAAGATGGAGAGTTCTT
TGTTGTTCATACGAAAAAACGAGATGGAAATGAAGAAACATATAAAGCAAAGTATGTGATTGTTGCAACAGGGTATTATG
ATAATCCAAATTATATGAACGTTCCAGGTGAAGAACTTGACAAAGTATCTCATTATTTTAAAGAGGCACATCCTTATTTT
GATCGAGATGTAGTTGTAATAGGTGGAAAGAATTCCAGTGTAGACGCTGCGCTAGAACTTGTAAAAGCTGGAGCACGTGT
AACAGTATTGTATCGTGGCGGGGAATATTCACCGAGCATTAAACCATGGATTTTGCCGGAATTTGAAGCGCTCGTACGCA
ATGGTACGATTCAAATGCATTTTCATGCTCATGTGGAGAGAATTACGGAGCATACGTTAACGTATACAATTGATGGGAAA
TCCTTTACAATTCAAAATGATTTTGTATTCGCAATGACAGGATACCATCCAGATCATAGCTTCTTGACGAAAATGGGAGT
GGAGATTGATAATGAAACGGGACGCCCACTTTACAATGAAGAAACGATGGAAACAAATGTGGAGAACATCTTTATTGCGG
GTGTGATTGCAGCTGGTAATAATGCAAATGAAATTTTTATTGAAAATGGACGATTTCATGGTGGAGCAATTGCACAAGCA
ATTGTATCAAGAGAATCAAAATAA

Upstream 100 bases:

>100_bases
GAAAAAAGAATACAATAAAGATAGGTACCTACTGCTGAAAGTAGGTTTTTTCTTGTTTTATAAATAGAGTTTGAGGTAGA
AGACTAGGAGTGAACCGAGT

Downstream 100 bases:

>100_bases
GCTGTCGAATTTCGACAGCTTATTTTTTAATCATGCATAAATATTTTTTGGATTTTTTCTTGCGAATGAGCACATTCTAA
AGCAACAAGCAATTTAATAC

Product: hypothetical protein

Products: thioredoxin disulfide; NADPH; H+

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MQKEAAIIIGGGPCGLAAAISLQEAGINALVIEKGNIVNAIYHYPTHQTFFSSSEKLEIGDVAFITENRKPVRNQALAYY
REVVKRKGVRVHAFERVEQVQKDGEFFVVHTKKRDGNEETYKAKYVIVATGYYDNPNYMNVPGEELDKVSHYFKEAHPYF
DRDVVVIGGKNSSVDAALELVKAGARVTVLYRGGEYSPSIKPWILPEFEALVRNGTIQMHFHAHVERITEHTLTYTIDGK
SFTIQNDFVFAMTGYHPDHSFLTKMGVEIDNETGRPLYNEETMETNVENIFIAGVIAAGNNANEIFIENGRFHGGAIAQA
IVSRESK

Sequences:

>Translated_327_residues
MQKEAAIIIGGGPCGLAAAISLQEAGINALVIEKGNIVNAIYHYPTHQTFFSSSEKLEIGDVAFITENRKPVRNQALAYY
REVVKRKGVRVHAFERVEQVQKDGEFFVVHTKKRDGNEETYKAKYVIVATGYYDNPNYMNVPGEELDKVSHYFKEAHPYF
DRDVVVIGGKNSSVDAALELVKAGARVTVLYRGGEYSPSIKPWILPEFEALVRNGTIQMHFHAHVERITEHTLTYTIDGK
SFTIQNDFVFAMTGYHPDHSFLTKMGVEIDNETGRPLYNEETMETNVENIFIAGVIAAGNNANEIFIENGRFHGGAIAQA
IVSRESK
>Mature_327_residues
MQKEAAIIIGGGPCGLAAAISLQEAGINALVIEKGNIVNAIYHYPTHQTFFSSSEKLEIGDVAFITENRKPVRNQALAYY
REVVKRKGVRVHAFERVEQVQKDGEFFVVHTKKRDGNEETYKAKYVIVATGYYDNPNYMNVPGEELDKVSHYFKEAHPYF
DRDVVVIGGKNSSVDAALELVKAGARVTVLYRGGEYSPSIKPWILPEFEALVRNGTIQMHFHAHVERITEHTLTYTIDGK
SFTIQNDFVFAMTGYHPDHSFLTKMGVEIDNETGRPLYNEETMETNVENIFIAGVIAAGNNANEIFIENGRFHGGAIAQA
IVSRESK

Specific function: Unknown

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR001327
- InterPro:   IPR000103 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: 1.8.1.9

Molecular weight: Translated: 36581; Mature: 36581

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKEAAIIIGGGPCGLAAAISLQEAGINALVIEKGNIVNAIYHYPTHQTFFSSSEKLEIG
CCCCEEEEECCCCCCHHEEEEHHHCCCEEEEEECCCEEEEEEECCCCHHHCCCCCCEEEC
DVAFITENRKPVRNQALAYYREVVKRKGVRVHAFERVEQVQKDGEFFVVHTKKRDGNEET
EEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCEEEEEECCCCCCCCE
YKAKYVIVATGYYDNPNYMNVPGEELDKVSHYFKEAHPYFDRDVVVIGGKNSSVDAALEL
EEEEEEEEEEEEECCCCEECCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHH
VKAGARVTVLYRGGEYSPSIKPWILPEFEALVRNGTIQMHFHAHVERITEHTLTYTIDGK
HHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCEEEEEEHHHHHHHHCCEEEEEECCC
SFTIQNDFVFAMTGYHPDHSFLTKMGVEIDNETGRPLYNEETMETNVENIFIAGVIAAGN
EEEEECCEEEEEECCCCCHHHHHHHCCEEECCCCCCCCCCCHHHCCCCEEEEEEEEEECC
NANEIFIENGRFHGGAIAQAIVSRESK
CCCEEEEECCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MQKEAAIIIGGGPCGLAAAISLQEAGINALVIEKGNIVNAIYHYPTHQTFFSSSEKLEIG
CCCCEEEEECCCCCCHHEEEEHHHCCCEEEEEECCCEEEEEEECCCCHHHCCCCCCEEEC
DVAFITENRKPVRNQALAYYREVVKRKGVRVHAFERVEQVQKDGEFFVVHTKKRDGNEET
EEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCEEEEEECCCCCCCCE
YKAKYVIVATGYYDNPNYMNVPGEELDKVSHYFKEAHPYFDRDVVVIGGKNSSVDAALEL
EEEEEEEEEEEEECCCCEECCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHH
VKAGARVTVLYRGGEYSPSIKPWILPEFEALVRNGTIQMHFHAHVERITEHTLTYTIDGK
HHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCEEEEEEHHHHHHHHCCEEEEEECCC
SFTIQNDFVFAMTGYHPDHSFLTKMGVEIDNETGRPLYNEETMETNVENIFIAGVIAAGN
EEEEECCEEEEEECCCCCHHHHHHHCCEEECCCCCCCCCCCHHHCCCCEEEEEEEEEECC
NANEIFIENGRFHGGAIAQAIVSRESK
CCCEEEEECCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: thioredoxin; NADP+

Specific reaction: thioredoxin + NADP+ = thioredoxin disulfide + NADPH + H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]