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The map label for this gene is yebA [C]

Identifier: 152975003

GI number: 152975003

Start: 1317880

End: 1318494

Strand: Direct

Name: yebA [C]

Synonym: Bcer98_1203

Alternate gene names: 152975003

Gene position: 1317880-1318494 (Clockwise)

Preceding gene: 152975002

Following gene: 152975005

Centisome position: 32.25

GC content: 35.61

Gene sequence:

>615_bases
ATGAAAGTTTTTAAAATTGGTATCATCATAACAGGATTATTCTTTTGTTCCCAATTATATGTTTATGCTGATGAAAATCA
GTGGACATGGCCTGTCGACGGTAGAATTAGTGACTACTTTGGGACTAGACATGGAAAACATTATGGGATTGATATTGCCG
CTCAAGTTGGAACTCCTGTTGTAGCGATTCGAGATGGCATCGTAACAAAATCGTACTTTTCCAATAGTTATGGACATGTT
GTATTTGTAAAACATGGGAAATATGAAGCTGTTTATGCTCATTTAAATAAGCGATATGTTATTCAAGGAGATCGCGTTCG
AAACGGTGAAGTCATCGGTGAGGTTGGAAATACAGGTGAATCGAGAGGAGCGCACTTACACCTAGAAATTCATCAAGGAA
ATTGGACAATTGAAAAAAGAAATGCAATGAATCCATTACTTGTTTTAGATGAAAAGTGGGATCAAGTCGTTTCATCGTCT
TTATATGTTGTCCAAAAGGGGGATACGCTCGTTAAAATTGCACATAAGTTTGGGACTACGGTAGACAAAATAAAAAAGAA
AAATGCACTGCGGCAAGATCAAATTTATCCAAATCAAAGATTATATATTAATTAA

Upstream 100 bases:

>100_bases
AAGGAAGTGGACTAAATCACTTTCTTTTTTTTGTATACTTTTTTCCGTATTATACCACAATAGAGAAAGGATAACGGCTA
ATAGAAAGCGGAGGATACAT

Downstream 100 bases:

>100_bases
AACAAGAGCTAGCTTCAGCTAGCTCTTGTTTTACCAAAAAATAAAGACACATATAAATCCGGAAATAGCTAAATAGCTAT
AATAATAAAAGACTTTTGCT

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MKVFKIGIIITGLFFCSQLYVYADENQWTWPVDGRISDYFGTRHGKHYGIDIAAQVGTPVVAIRDGIVTKSYFSNSYGHV
VFVKHGKYEAVYAHLNKRYVIQGDRVRNGEVIGEVGNTGESRGAHLHLEIHQGNWTIEKRNAMNPLLVLDEKWDQVVSSS
LYVVQKGDTLVKIAHKFGTTVDKIKKKNALRQDQIYPNQRLYIN

Sequences:

>Translated_204_residues
MKVFKIGIIITGLFFCSQLYVYADENQWTWPVDGRISDYFGTRHGKHYGIDIAAQVGTPVVAIRDGIVTKSYFSNSYGHV
VFVKHGKYEAVYAHLNKRYVIQGDRVRNGEVIGEVGNTGESRGAHLHLEIHQGNWTIEKRNAMNPLLVLDEKWDQVVSSS
LYVVQKGDTLVKIAHKFGTTVDKIKKKNALRQDQIYPNQRLYIN
>Mature_204_residues
MKVFKIGIIITGLFFCSQLYVYADENQWTWPVDGRISDYFGTRHGKHYGIDIAAQVGTPVVAIRDGIVTKSYFSNSYGHV
VFVKHGKYEAVYAHLNKRYVIQGDRVRNGEVIGEVGNTGESRGAHLHLEIHQGNWTIEKRNAMNPLLVLDEKWDQVVSSS
LYVVQKGDTLVKIAHKFGTTVDKIKKKNALRQDQIYPNQRLYIN

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=119, Percent_Identity=38.655462184874, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1789099, Length=129, Percent_Identity=34.1085271317829, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI87082174, Length=132, Percent_Identity=31.0606060606061, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 23240; Mature: 23240

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVFKIGIIITGLFFCSQLYVYADENQWTWPVDGRISDYFGTRHGKHYGIDIAAQVGTPV
CEEEEEHHHHHHHHHHCEEEEEECCCCEECCCCCCCHHHCCCCCCCEECEEEEECCCCCE
VAIRDGIVTKSYFSNSYGHVVFVKHGKYEAVYAHLNKRYVIQGDRVRNGEVIGEVGNTGE
EEEECCEEEHHHHCCCCCEEEEEECCCEEEEEEECCCEEEEECCEEECCEEEEECCCCCC
SRGAHLHLEIHQGNWTIEKRNAMNPLLVLDEKWDQVVSSSLYVVQKGDTLVKIAHKFGTT
CCCCEEEEEEECCCEEEECCCCCCCEEEEECHHHHHHCCCEEEEECCCEEEEEHHHHCCH
VDKIKKKNALRQDQIYPNQRLYIN
HHHHHHHCCCCHHCCCCCCEEEEC
>Mature Secondary Structure
MKVFKIGIIITGLFFCSQLYVYADENQWTWPVDGRISDYFGTRHGKHYGIDIAAQVGTPV
CEEEEEHHHHHHHHHHCEEEEEECCCCEECCCCCCCHHHCCCCCCCEECEEEEECCCCCE
VAIRDGIVTKSYFSNSYGHVVFVKHGKYEAVYAHLNKRYVIQGDRVRNGEVIGEVGNTGE
EEEECCEEEHHHHCCCCCEEEEEECCCEEEEEEECCCEEEEECCEEECCEEEEECCCCCC
SRGAHLHLEIHQGNWTIEKRNAMNPLLVLDEKWDQVVSSSLYVVQKGDTLVKIAHKFGTT
CCCCEEEEEEECCCEEEECCCCCCCEEEEECHHHHHHCCCEEEEECCCEEEEEHHHHCCH
VDKIKKKNALRQDQIYPNQRLYIN
HHHHHHHCCCCHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]