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The map label for this gene is ypoP [H]

Identifier: 152974916

GI number: 152974916

Start: 1225152

End: 1225574

Strand: Direct

Name: ypoP [H]

Synonym: Bcer98_1112

Alternate gene names: 152974916

Gene position: 1225152-1225574 (Clockwise)

Preceding gene: 152974914

Following gene: 152974917

Centisome position: 29.98

GC content: 34.04

Gene sequence:

>423_bases
ATGGTGTCTTACAATCGTGAACAATTAATGGAAGACCTATCTACAAATGTCTTTGCTATGTTTCGTTCGTTGCGTAATGA
TATTGGCAAGATCTTTGGTGGTTACATACCGTGGAATGAGTTTGTTGTGCTTCGTATATTAAATCGTGCTAACAAAGAGA
TGGTTTCACGAGTGGCGAATGAATTGAATGTTTCGAATAGTCATATTACAGCTGTAACAGAGAAGTTAATTCATAAAGGT
TTTGTAACACGTTCACGTTCTACATCAGATCGGCGTGTTGTATATTTAGAAATTACAGAGCAAGGAAAAGAATTAGTTGC
TAAAATGGAATCGGCGAAAAGACAATATTTAAAAGAAAGATTCTCAGCTTTATCTGAAGAAGAAATGGAATGTATGATAG
CTATTTCGAAAAAACTTATATAA

Upstream 100 bases:

>100_bases
ACTGAATTTTTATAAGACAATAAGATGACAAAAGGTAAGATTTAAGGTAAAATTATTAATAATATTTTTATTTAACTATA
TGAAATAAAAGGGGATGTAA

Downstream 100 bases:

>100_bases
GAACAAATCCTTCTCAGCTTTGAGAAGGATTTTTTATTAAAAAAGTGCTATAAATAATGAAAAAATGCGTAGCTGCTATA
GGTGGAAAATGAGTATGATT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MVSYNREQLMEDLSTNVFAMFRSLRNDIGKIFGGYIPWNEFVVLRILNRANKEMVSRVANELNVSNSHITAVTEKLIHKG
FVTRSRSTSDRRVVYLEITEQGKELVAKMESAKRQYLKERFSALSEEEMECMIAISKKLI

Sequences:

>Translated_140_residues
MVSYNREQLMEDLSTNVFAMFRSLRNDIGKIFGGYIPWNEFVVLRILNRANKEMVSRVANELNVSNSHITAVTEKLIHKG
FVTRSRSTSDRRVVYLEITEQGKELVAKMESAKRQYLKERFSALSEEEMECMIAISKKLI
>Mature_140_residues
MVSYNREQLMEDLSTNVFAMFRSLRNDIGKIFGGYIPWNEFVVLRILNRANKEMVSRVANELNVSNSHITAVTEKLIHKG
FVTRSRSTSDRRVVYLEITEQGKELVAKMESAKRQYLKERFSALSEEEMECMIAISKKLI

Specific function: Negative Regulator Of The Multidrug Operon Emrab. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16254; Mature: 16254

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSYNREQLMEDLSTNVFAMFRSLRNDIGKIFGGYIPWNEFVVLRILNRANKEMVSRVAN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ELNVSNSHITAVTEKLIHKGFVTRSRSTSDRRVVYLEITEQGKELVAKMESAKRQYLKER
HHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH
FSALSEEEMECMIAISKKLI
HHHHCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVSYNREQLMEDLSTNVFAMFRSLRNDIGKIFGGYIPWNEFVVLRILNRANKEMVSRVAN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ELNVSNSHITAVTEKLIHKGFVTRSRSTSDRRVVYLEITEQGKELVAKMESAKRQYLKER
HHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH
FSALSEEEMECMIAISKKLI
HHHHCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]