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The map label for this gene is licT [H]

Identifier: 152974599

GI number: 152974599

Start: 895410

End: 896252

Strand: Direct

Name: licT [H]

Synonym: Bcer98_0783

Alternate gene names: 152974599

Gene position: 895410-896252 (Clockwise)

Preceding gene: 152974597

Following gene: 152974600

Centisome position: 21.91

GC content: 32.74

Gene sequence:

>843_bases
ATGAAAATCCATAAAATTTTAAATAATAATGTTGTTTGTACGATAAAAGAGAATAATAGTGAAATTATATTGATGGGTAG
AGGTTTAGGATTTCAGAAAAAAGTGGGGGATACAATTGATGAATCTAAAATAGAAAAAACATTCGTTTTAGAAACAAAAG
AAGTATCTGAGAAGCTTGCTACGTTATTAACTGAGATTCCTGTAGAGCATTTAGAAGTGACAGAGCAAATTGTACAATTA
GCGAAAACTATTTTGCCGAGCCGTTTAAGCGAGTATATTTATCTTACATTAACAGATCACCTTAGCTTTGTGTTCACGCG
GCATAAAGAAGGGATTGAGCTGAAAAATGCACTTCTTTGGGAAATCAAAAAGTTTTATCAAACAGAGTTTGAAATTGGTT
TACGAGCTTTAGAGATTATTGAAAAAGAAACAGGTATTAGGCTTTCAGAGGATGAGGCTGGTTCGATTGCACTTCATTTA
GTAAATGCTCAGCAAGGGGAACCAGAAATGCAGCAAACAGTAACAATGACAAAAATTGTTCAAGATATTTTAAATATTGT
GAAGTATCATTATAAGATGGATTTAGATGAAAATTCATTTAACTATAGCCGATTTGTCACTCACTTACGATATTTTGCTC
AACGTTTACTTCAGCATGAATCAAGCTCAAATGAAGATGACTTTTTATTTGAGCAAGTCAAACAAAAGTACAACGAAGCT
TATCGTTGTACAGAGAAAATAGAAGAGTATTTACGTAGTAGACATAACACTCTTCTTTCGAAAGATGAAAAAATGTATGT
AACGCTTCATATCCACCGTGTAACGAAGCGGGAATCAATTTGA

Upstream 100 bases:

>100_bases
AATTGATTCGAAGACTACTATTGCTATGTAGTTTTGGGGAATCAGTTTAGGTTTTTTTTATTATTTGTGATCACATTAGA
AATAAAAAGAGGCGAACAAA

Downstream 100 bases:

>100_bases
ATAAAATATAGGATTGTTACTGATTAGCAGGCAAAACCTAAATTAATTTCCATTTGCATGAAAATAATTTTGTGCAGGTG
GGGATTAGTTTAGGTTTTTA

Product: transcriptional antiterminator, BglG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKIHKILNNNVVCTIKENNSEIILMGRGLGFQKKVGDTIDESKIEKTFVLETKEVSEKLATLLTEIPVEHLEVTEQIVQL
AKTILPSRLSEYIYLTLTDHLSFVFTRHKEGIELKNALLWEIKKFYQTEFEIGLRALEIIEKETGIRLSEDEAGSIALHL
VNAQQGEPEMQQTVTMTKIVQDILNIVKYHYKMDLDENSFNYSRFVTHLRYFAQRLLQHESSSNEDDFLFEQVKQKYNEA
YRCTEKIEEYLRSRHNTLLSKDEKMYVTLHIHRVTKRESI

Sequences:

>Translated_280_residues
MKIHKILNNNVVCTIKENNSEIILMGRGLGFQKKVGDTIDESKIEKTFVLETKEVSEKLATLLTEIPVEHLEVTEQIVQL
AKTILPSRLSEYIYLTLTDHLSFVFTRHKEGIELKNALLWEIKKFYQTEFEIGLRALEIIEKETGIRLSEDEAGSIALHL
VNAQQGEPEMQQTVTMTKIVQDILNIVKYHYKMDLDENSFNYSRFVTHLRYFAQRLLQHESSSNEDDFLFEQVKQKYNEA
YRCTEKIEEYLRSRHNTLLSKDEKMYVTLHIHRVTKRESI
>Mature_280_residues
MKIHKILNNNVVCTIKENNSEIILMGRGLGFQKKVGDTIDESKIEKTFVLETKEVSEKLATLLTEIPVEHLEVTEQIVQL
AKTILPSRLSEYIYLTLTDHLSFVFTRHKEGIELKNALLWEIKKFYQTEFEIGLRALEIIEKETGIRLSEDEAGSIALHL
VNAQQGEPEMQQTVTMTKIVQDILNIVKYHYKMDLDENSFNYSRFVTHLRYFAQRLLQHESSSNEDDFLFEQVKQKYNEA
YRCTEKIEEYLRSRHNTLLSKDEKMYVTLHIHRVTKRESI

Specific function: Mediates positive regulation of the glucanase operon (licST) by functioning as an antiterminator factor of transcription. Prevents termination at terminator lic-t [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PRD domains [H]

Homologues:

Organism=Escherichia coli, GI1790160, Length=276, Percent_Identity=38.768115942029, Blast_Score=226, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004341
- InterPro:   IPR011608
- InterPro:   IPR001550 [H]

Pfam domain/function: PF03123 CAT_RBD; PF00874 PRD [H]

EC number: NA

Molecular weight: Translated: 32900; Mature: 32900

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIHKILNNNVVCTIKENNSEIILMGRGLGFQKKVGDTIDESKIEKTFVLETKEVSEKLA
CCCHHHHCCCEEEEEEECCCEEEEEECCCCCHHHHCCCHHHHHHHHHHEEEHHHHHHHHH
TLLTEIPVEHLEVTEQIVQLAKTILPSRLSEYIYLTLTDHLSFVFTRHKEGIELKNALLW
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHCCCCCHHHHHHHH
EIKKFYQTEFEIGLRALEIIEKETGIRLSEDEAGSIALHLVNAQQGEPEMQQTVTMTKIV
HHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH
QDILNIVKYHYKMDLDENSFNYSRFVTHLRYFAQRLLQHESSSNEDDFLFEQVKQKYNEA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
YRCTEKIEEYLRSRHNTLLSKDEKMYVTLHIHRVTKRESI
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHHCCCC
>Mature Secondary Structure
MKIHKILNNNVVCTIKENNSEIILMGRGLGFQKKVGDTIDESKIEKTFVLETKEVSEKLA
CCCHHHHCCCEEEEEEECCCEEEEEECCCCCHHHHCCCHHHHHHHHHHEEEHHHHHHHHH
TLLTEIPVEHLEVTEQIVQLAKTILPSRLSEYIYLTLTDHLSFVFTRHKEGIELKNALLW
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHCCCCCHHHHHHHH
EIKKFYQTEFEIGLRALEIIEKETGIRLSEDEAGSIALHLVNAQQGEPEMQQTVTMTKIV
HHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH
QDILNIVKYHYKMDLDENSFNYSRFVTHLRYFAQRLLQHESSSNEDDFLFEQVKQKYNEA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
YRCTEKIEEYLRSRHNTLLSKDEKMYVTLHIHRVTKRESI
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8606172; 8969509; 9384377; 6087283 [H]