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The map label for this gene is rapF [H]

Identifier: 152974568

GI number: 152974568

Start: 855631

End: 856737

Strand: Direct

Name: rapF [H]

Synonym: Bcer98_0747

Alternate gene names: 152974568

Gene position: 855631-856737 (Clockwise)

Preceding gene: 152974567

Following gene: 152974570

Centisome position: 20.94

GC content: 29.9

Gene sequence:

>1107_bases
ATGAGCACAGGTGTTTTCGCGCATGAAGTAATTATGGAACAACTCCATGATTTGTACCAATTGATGTTATCGCAGCAATT
AATAAAAGCGACACAATTAAAAAAAGAAATAGATGAGAAAATAGAACATATTAAGCATGCAGAAGAAAAACAAAATCAGA
ATGTACTATTATACTATTCTTTGCTAGATTTTAAATACAAACTACTGACTGACAGATTAAGTATTAGAAAAGACAGTTTC
GATGTAATTGATTCTATTGATGAAACAAACGATAAGCTTACAGCTTATTACTATCACTCTTTCAAAGGTGAGCATGCTTT
AATGTTTAGTGATTATAATGAAGCTAGCAGACAATATGAAGAAGCTGAAAGGTTATTAGAATATATTTCTGATGAGTTAG
AACATGCTGAATTTAATCAAAAACTCGCTGTATTACATCACACTTCTAAAATGTTAACATCGATTGAATATGCGAATAAA
GCAAAAGAAATTTTTGCAAAACATGCTGGATATGAAGTGAAAGTGGCGTCTTGTGAAAATACATTAGGAACTGCTTGTAT
ATTTTTAAAACAATTCGAACAAGCTGAAGAACACTTGAATCGATCCATCGACATTTTACAAAAACAGAATGAGGAAAAAC
TAATTTTAGTAGTTAGACATAATTTAGGATTATTATATGCAATGCAAAACTTATCTCCATTAGCGATTCGTCATTTATCT
GAAGTTACAGAAAAAAATCCAAATCATTTTAAAGCATTGTTCTTACAAGCACGTGAACATTATAAGCTACAAGAAACAAA
TATTGCGCAAGAACTGATTGAAAAAGGATTGAAAGTTTGTGATGAAATAGGAAATGAAGAGTATGTGTACCATTTCAATA
TTTTACGTTTATTAAATGAAAACAAACCTATTGAACTAGTAGAAGAAGAAGTGAAAAAAAGCATTTCTTATTTCAAAAAA
CAAGGGTTATGGGAGTTTGTTGAAGAATATGGAGAGTTGTTAGCTGTTGCGTTTCGTAAATTACATAATCATGAAAAAGT
TAGTGATTACTTCAATGTATGTTACGAAGCGAAACAACAAATAATTAGTAAAGGAGCATTAAAATGA

Upstream 100 bases:

>100_bases
CTGTTATTTATCAGTTTACAACAAAGGTATTCTTCCTATGGAATATGTATAATTGTGGTAATATTTAGATAAAAGAAGAG
TGTCGAGGAGGATGTAGTGT

Downstream 100 bases:

>100_bases
TGAAAAAATTTGTATTCGCAACGTTAGGATTGGTAATGGCTTTAGCGATTGGGTGGAATAACGAAGGTGATACACAACAT
GCTCTGCAAAAAGAAGAAAT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MSTGVFAHEVIMEQLHDLYQLMLSQQLIKATQLKKEIDEKIEHIKHAEEKQNQNVLLYYSLLDFKYKLLTDRLSIRKDSF
DVIDSIDETNDKLTAYYYHSFKGEHALMFSDYNEASRQYEEAERLLEYISDELEHAEFNQKLAVLHHTSKMLTSIEYANK
AKEIFAKHAGYEVKVASCENTLGTACIFLKQFEQAEEHLNRSIDILQKQNEEKLILVVRHNLGLLYAMQNLSPLAIRHLS
EVTEKNPNHFKALFLQAREHYKLQETNIAQELIEKGLKVCDEIGNEEYVYHFNILRLLNENKPIELVEEEVKKSISYFKK
QGLWEFVEEYGELLAVAFRKLHNHEKVSDYFNVCYEAKQQIISKGALK

Sequences:

>Translated_368_residues
MSTGVFAHEVIMEQLHDLYQLMLSQQLIKATQLKKEIDEKIEHIKHAEEKQNQNVLLYYSLLDFKYKLLTDRLSIRKDSF
DVIDSIDETNDKLTAYYYHSFKGEHALMFSDYNEASRQYEEAERLLEYISDELEHAEFNQKLAVLHHTSKMLTSIEYANK
AKEIFAKHAGYEVKVASCENTLGTACIFLKQFEQAEEHLNRSIDILQKQNEEKLILVVRHNLGLLYAMQNLSPLAIRHLS
EVTEKNPNHFKALFLQAREHYKLQETNIAQELIEKGLKVCDEIGNEEYVYHFNILRLLNENKPIELVEEEVKKSISYFKK
QGLWEFVEEYGELLAVAFRKLHNHEKVSDYFNVCYEAKQQIISKGALK
>Mature_367_residues
STGVFAHEVIMEQLHDLYQLMLSQQLIKATQLKKEIDEKIEHIKHAEEKQNQNVLLYYSLLDFKYKLLTDRLSIRKDSFD
VIDSIDETNDKLTAYYYHSFKGEHALMFSDYNEASRQYEEAERLLEYISDELEHAEFNQKLAVLHHTSKMLTSIEYANKA
KEIFAKHAGYEVKVASCENTLGTACIFLKQFEQAEEHLNRSIDILQKQNEEKLILVVRHNLGLLYAMQNLSPLAIRHLSE
VTEKNPNHFKALFLQAREHYKLQETNIAQELIEKGLKVCDEIGNEEYVYHFNILRLLNENKPIELVEEEVKKSISYFKKQ
GLWEFVEEYGELLAVAFRKLHNHEKVSDYFNVCYEAKQQIISKGALK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 43246; Mature: 43115

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTGVFAHEVIMEQLHDLYQLMLSQQLIKATQLKKEIDEKIEHIKHAEEKQNQNVLLYYS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEH
LLDFKYKLLTDRLSIRKDSFDVIDSIDETNDKLTAYYYHSFKGEHALMFSDYNEASRQYE
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCHHHHHHHHH
EAERLLEYISDELEHAEFNQKLAVLHHTSKMLTSIEYANKAKEIFAKHAGYEVKVASCEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC
TLGTACIFLKQFEQAEEHLNRSIDILQKQNEEKLILVVRHNLGLLYAMQNLSPLAIRHLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCHHHHHHHH
EVTEKNPNHFKALFLQAREHYKLQETNIAQELIEKGLKVCDEIGNEEYVYHFNILRLLNE
HHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCC
NKPIELVEEEVKKSISYFKKQGLWEFVEEYGELLAVAFRKLHNHEKVSDYFNVCYEAKQQ
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
IISKGALK
HHHCCCCC
>Mature Secondary Structure 
STGVFAHEVIMEQLHDLYQLMLSQQLIKATQLKKEIDEKIEHIKHAEEKQNQNVLLYYS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEH
LLDFKYKLLTDRLSIRKDSFDVIDSIDETNDKLTAYYYHSFKGEHALMFSDYNEASRQYE
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCHHHHHHHHH
EAERLLEYISDELEHAEFNQKLAVLHHTSKMLTSIEYANKAKEIFAKHAGYEVKVASCEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC
TLGTACIFLKQFEQAEEHLNRSIDILQKQNEEKLILVVRHNLGLLYAMQNLSPLAIRHLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCHHHHHHHH
EVTEKNPNHFKALFLQAREHYKLQETNIAQELIEKGLKVCDEIGNEEYVYHFNILRLLNE
HHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCC
NKPIELVEEEVKKSISYFKKQGLWEFVEEYGELLAVAFRKLHNHEKVSDYFNVCYEAKQQ
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
IISKGALK
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]