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The map label for this gene is yfeT [C]

Identifier: 152974493

GI number: 152974493

Start: 754638

End: 755501

Strand: Direct

Name: yfeT [C]

Synonym: Bcer98_0668

Alternate gene names: 152974493

Gene position: 754638-755501 (Clockwise)

Preceding gene: 152974492

Following gene: 152974494

Centisome position: 18.46

GC content: 38.31

Gene sequence:

>864_bases
GTGAAGGCGTCAACACTATTATTTAAAATTAAAAATGATATGGATCAATTCTCACCCGCTGAAAAAAAGGTCGCGCAGTA
TATTATGGAACATGCTGAGATTGTTCCAAATTTAACGACGAAAGAAGTGTCTCATAATGCGGGAGCTAGTGAAGCAAGTG
TCGTGCGCTTTTGTAAAACGATTGGTATTGGCAGCTTTAAAGCATTTAAACTAGCGCTTGTTCGTGAATTAACAATTGCC
GATTATAATATTAATGATTTTTCCGTGCTAAATACAGAAGATGGTCCGTTTGATTTGTTTAATAAAGTGACATATGTGAA
TAAGGCTGCCATTGAGGCAAGTGTGACAGCAATTGATAAAAGAGAGTTAGAAAAAGCAGCAGATGCTATTTTAAAGGCGA
GAACGATATTATTTTACGGAGTTGGCGGATCTGCTGCACCAGCAATGGATGGAGCATATAAATTTACAAGACTTGGGTTT
ACAGCAATGATGCTTTCTGATTTCCACATGATGCTTCCGCTTATTACGAATTTAAAGACAGGCGATGTCTTTGTTGCTAT
TTCAACATCGGGGCGTACAAAGGATGTATTAGAGGTGGTGCAGTATGCGAAGAAGCAAGGGGTAACTGTTATTGCCATTA
CGAAACTTGACCAATTATCGCCATTATATAAAGAAGCTGATATTCATCTTTGCATCCCAGATGTAGAGCAAGATTACCGC
ATTGCAAGTATTGCATCGCGAATGACACAATTAAATATCATTGATGCATTATATGTCATTACATTTAATCGGATGGGCGA
CCAAGTGTTGGATCGCTTTATGGAAACAAGAGCGGAAGCAGATCGGTTAAGAAAGTTAAAGTGA

Upstream 100 bases:

>100_bases
CGATATATTTGAAAAATCGCTGATATATAATGAGTAGGATGGAACGAAAGGGGGTGATTAAGCTACAATAAAAATAAGAG
TAAGGAATGGAGGATATTTG

Downstream 100 bases:

>100_bases
AACTGTACATATAGTGCTTGCTGGATTTCTTTACGAGCAGCAAAATTCTCCTCGCGAAATCTTACATAATTGTCATCTTT
ACGTAAGGTTTTTAAATGGT

Product: RpiR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKASTLLFKIKNDMDQFSPAEKKVAQYIMEHAEIVPNLTTKEVSHNAGASEASVVRFCKTIGIGSFKAFKLALVRELTIA
DYNINDFSVLNTEDGPFDLFNKVTYVNKAAIEASVTAIDKRELEKAADAILKARTILFYGVGGSAAPAMDGAYKFTRLGF
TAMMLSDFHMMLPLITNLKTGDVFVAISTSGRTKDVLEVVQYAKKQGVTVIAITKLDQLSPLYKEADIHLCIPDVEQDYR
IASIASRMTQLNIIDALYVITFNRMGDQVLDRFMETRAEADRLRKLK

Sequences:

>Translated_287_residues
MKASTLLFKIKNDMDQFSPAEKKVAQYIMEHAEIVPNLTTKEVSHNAGASEASVVRFCKTIGIGSFKAFKLALVRELTIA
DYNINDFSVLNTEDGPFDLFNKVTYVNKAAIEASVTAIDKRELEKAADAILKARTILFYGVGGSAAPAMDGAYKFTRLGF
TAMMLSDFHMMLPLITNLKTGDVFVAISTSGRTKDVLEVVQYAKKQGVTVIAITKLDQLSPLYKEADIHLCIPDVEQDYR
IASIASRMTQLNIIDALYVITFNRMGDQVLDRFMETRAEADRLRKLK
>Mature_287_residues
MKASTLLFKIKNDMDQFSPAEKKVAQYIMEHAEIVPNLTTKEVSHNAGASEASVVRFCKTIGIGSFKAFKLALVRELTIA
DYNINDFSVLNTEDGPFDLFNKVTYVNKAAIEASVTAIDKRELEKAADAILKARTILFYGVGGSAAPAMDGAYKFTRLGF
TAMMLSDFHMMLPLITNLKTGDVFVAISTSGRTKDVLEVVQYAKKQGVTVIAITKLDQLSPLYKEADIHLCIPDVEQDYR
IASIASRMTQLNIIDALYVITFNRMGDQVLDRFMETRAEADRLRKLK

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1788767, Length=258, Percent_Identity=29.4573643410853, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1788159, Length=254, Percent_Identity=30.7086614173228, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI87082369, Length=243, Percent_Identity=30.4526748971193, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI87082130, Length=256, Percent_Identity=26.5625, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 31927; Mature: 31927

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASTLLFKIKNDMDQFSPAEKKVAQYIMEHAEIVPNLTTKEVSHNAGASEASVVRFCKT
CCCCEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHH
IGIGSFKAFKLALVRELTIADYNINDFSVLNTEDGPFDLFNKVTYVNKAAIEASVTAIDK
HCCCCHHHHHHHHHHHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RELEKAADAILKARTILFYGVGGSAAPAMDGAYKFTRLGFTAMMLSDFHMMLPLITNLKT
HHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GDVFVAISTSGRTKDVLEVVQYAKKQGVTVIAITKLDQLSPLYKEADIHLCIPDVEQDYR
CCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHCHHHHCCCEEEECCCCCCHHH
IASIASRMTQLNIIDALYVITFNRMGDQVLDRFMETRAEADRLRKLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKASTLLFKIKNDMDQFSPAEKKVAQYIMEHAEIVPNLTTKEVSHNAGASEASVVRFCKT
CCCCEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHH
IGIGSFKAFKLALVRELTIADYNINDFSVLNTEDGPFDLFNKVTYVNKAAIEASVTAIDK
HCCCCHHHHHHHHHHHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RELEKAADAILKARTILFYGVGGSAAPAMDGAYKFTRLGFTAMMLSDFHMMLPLITNLKT
HHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GDVFVAISTSGRTKDVLEVVQYAKKQGVTVIAITKLDQLSPLYKEADIHLCIPDVEQDYR
CCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHCHHHHCCCEEEECCCCCCHHH
IASIASRMTQLNIIDALYVITFNRMGDQVLDRFMETRAEADRLRKLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]