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The map label for this gene is yndD [H]

Identifier: 152974423

GI number: 152974423

Start: 678233

End: 679699

Strand: Direct

Name: yndD [H]

Synonym: Bcer98_0597

Alternate gene names: 152974423

Gene position: 678233-679699 (Clockwise)

Preceding gene: 152974422

Following gene: 152974424

Centisome position: 16.59

GC content: 36.33

Gene sequence:

>1467_bases
ATGATGAATTTAGAAGCAAGCTTATCAGCAATTACAAATTCTATTCGAGAAACACTGCAGTCACCTAATGATTTAACGGT
ACGAGAGTTTGCGCTTTCTGGTTCATCTACTCGGTGCGCTGTGGTGTTTCTTTGTGGGATTACGGATAAAGATTTAATTT
ATCGATTTGTGATTCATCCATTACAACATGAAGAGATTCCGCCTAAAGGTCCAATCATGCAAACTTTAGTCGATCGATTT
ATTTCTATAGGTGAAATAAATACAGTTAAAACATTTCCGGATCTTGTGAATTCTGTTTTGGTGGGGGATACGGTTGTTTT
AATTGATGGAATTCCGCATGCGTTAGTCATTAATTGTCGAGCATGGGAAAAGCGAGGTTTAGAACCGCCGATTACAGAGG
ATGTTATTCGAGGTCCTAAAGTAGGGTTTGTTGAAGATATTGCTACTAATAAAATGTTAATTAGACGCGAGTTGCGTGAT
CCGAAGCTTCGATTTCAATCTTATATTATGGGGCAACGTTCTCAAAAAGAAGTTACATTAATTTATATTGAAGATATTAT
CAATCCTTATATTGTAAAAGAGTTGAATCGGCGTTTACAGTCCATTAAAACAGATATGATTTTAGATTCTGGAAAAATCG
AACAATTACTAGAAGAGAACACCTTGTCTCCTTTTCCGCAATTTTTAAATACAGAGAGACCAGATCGGGCGATTGCTGCT
TTAGCAAAAGGAAAAGCAATTATTTTAGTAGATGGTTCACCGTTTGCAATTCTTGCACCTATGGTTATTGTGGATATTTT
TCAATCACCTGAAGATTATTATGAACGCTGGATTATGGCAACTTTATTAAGAGGATTGCGAATGCTAGCTGGACTTATGG
CTGTATTATTTCCAGCAGTATATATTGCGCTTGTTTCTTATCATCAAGGTCTCATTCCATCTAATTTGGCGTATTCAATT
GCTGGAGCAAGGGAAGGTGTCCCGTTTCCCGCTTATATTGAAACGATTATTATGACATTAACAATGGAATTAATTAGAGA
AGCTGGGCTTCGGTTGCCTAAACAAATTGGACAAACTGTTGGAATTGTAGGAGGACTTGTTATTGGAGAAGCGGCAGTAA
ACGCTGGAATTGTAAATCCCTTTATGGTTATTGTAACCGCGATTACGGCGATTGCTACTTTTTCATTGCCTGTTTACAGT
ATCACAATTACATTTCGCTTTTTGTTATTTGCGTTTATTTTAGCTGCGACTATATTTGGACTATACGGGATTATTTTAGC
GTTAATTGCATTAGCAATTCATATTACGAATTTAAAAAGTGTTGGAATTCCGTATTCTACACCATTAGCACCTACTTTTT
ATAAAGATTGGAAAGCAGAAGTAGCAAGATTACCAAAAGCGATGTTACAGACGAGACCAGACTATTTGCAAACAAAAGAT
CAAATACGCTCAAAGGAGAGAAAATAA

Upstream 100 bases:

>100_bases
GGGATAAAAAAATGTTATCTTTCCTTAGGGAGATAGCATTTTTTTATTGTATATATTTACCCTATACGGAGAAATATAAC
TGTAACGCTTAGGAGGAAAG

Downstream 100 bases:

>100_bases
ATTGAAACCGTTCGAGTACGGAGATGAGGAGATCGGATCTCGAGAACTAACATTTGCTGTATCTTCGGTCATTATAGGGA
CAGGGGCACTTTCGATGCCC

Product: GerA spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MMNLEASLSAITNSIRETLQSPNDLTVREFALSGSSTRCAVVFLCGITDKDLIYRFVIHPLQHEEIPPKGPIMQTLVDRF
ISIGEINTVKTFPDLVNSVLVGDTVVLIDGIPHALVINCRAWEKRGLEPPITEDVIRGPKVGFVEDIATNKMLIRRELRD
PKLRFQSYIMGQRSQKEVTLIYIEDIINPYIVKELNRRLQSIKTDMILDSGKIEQLLEENTLSPFPQFLNTERPDRAIAA
LAKGKAIILVDGSPFAILAPMVIVDIFQSPEDYYERWIMATLLRGLRMLAGLMAVLFPAVYIALVSYHQGLIPSNLAYSI
AGAREGVPFPAYIETIIMTLTMELIREAGLRLPKQIGQTVGIVGGLVIGEAAVNAGIVNPFMVIVTAITAIATFSLPVYS
ITITFRFLLFAFILAATIFGLYGIILALIALAIHITNLKSVGIPYSTPLAPTFYKDWKAEVARLPKAMLQTRPDYLQTKD
QIRSKERK

Sequences:

>Translated_488_residues
MMNLEASLSAITNSIRETLQSPNDLTVREFALSGSSTRCAVVFLCGITDKDLIYRFVIHPLQHEEIPPKGPIMQTLVDRF
ISIGEINTVKTFPDLVNSVLVGDTVVLIDGIPHALVINCRAWEKRGLEPPITEDVIRGPKVGFVEDIATNKMLIRRELRD
PKLRFQSYIMGQRSQKEVTLIYIEDIINPYIVKELNRRLQSIKTDMILDSGKIEQLLEENTLSPFPQFLNTERPDRAIAA
LAKGKAIILVDGSPFAILAPMVIVDIFQSPEDYYERWIMATLLRGLRMLAGLMAVLFPAVYIALVSYHQGLIPSNLAYSI
AGAREGVPFPAYIETIIMTLTMELIREAGLRLPKQIGQTVGIVGGLVIGEAAVNAGIVNPFMVIVTAITAIATFSLPVYS
ITITFRFLLFAFILAATIFGLYGIILALIALAIHITNLKSVGIPYSTPLAPTFYKDWKAEVARLPKAMLQTRPDYLQTKD
QIRSKERK
>Mature_488_residues
MMNLEASLSAITNSIRETLQSPNDLTVREFALSGSSTRCAVVFLCGITDKDLIYRFVIHPLQHEEIPPKGPIMQTLVDRF
ISIGEINTVKTFPDLVNSVLVGDTVVLIDGIPHALVINCRAWEKRGLEPPITEDVIRGPKVGFVEDIATNKMLIRRELRD
PKLRFQSYIMGQRSQKEVTLIYIEDIINPYIVKELNRRLQSIKTDMILDSGKIEQLLEENTLSPFPQFLNTERPDRAIAA
LAKGKAIILVDGSPFAILAPMVIVDIFQSPEDYYERWIMATLLRGLRMLAGLMAVLFPAVYIALVSYHQGLIPSNLAYSI
AGAREGVPFPAYIETIIMTLTMELIREAGLRLPKQIGQTVGIVGGLVIGEAAVNAGIVNPFMVIVTAITAIATFSLPVYS
ITITFRFLLFAFILAATIFGLYGIILALIALAIHITNLKSVGIPYSTPLAPTFYKDWKAEVARLPKAMLQTRPDYLQTKD
QIRSKERK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 54298; Mature: 54298

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNLEASLSAITNSIRETLQSPNDLTVREFALSGSSTRCAVVFLCGITDKDLIYRFVIHP
CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHH
LQHEEIPPKGPIMQTLVDRFISIGEINTVKTFPDLVNSVLVGDTVVLIDGIPHALVINCR
HHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECC
AWEKRGLEPPITEDVIRGPKVGFVEDIATNKMLIRRELRDPKLRFQSYIMGQRSQKEVTL
HHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEE
IYIEDIINPYIVKELNRRLQSIKTDMILDSGKIEQLLEENTLSPFPQFLNTERPDRAIAA
EEHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHCCCCCHHHHHH
LAKGKAIILVDGSPFAILAPMVIVDIFQSPEDYYERWIMATLLRGLRMLAGLMAVLFPAV
HHCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIALVSYHQGLIPSNLAYSIAGAREGVPFPAYIETIIMTLTMELIREAGLRLPKQIGQTV
HHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
GIVGGLVIGEAAVNAGIVNPFMVIVTAITAIATFSLPVYSITITFRFLLFAFILAATIFG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LYGIILALIALAIHITNLKSVGIPYSTPLAPTFYKDWKAEVARLPKAMLQTRPDYLQTKD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
QIRSKERK
HHHHCCCC
>Mature Secondary Structure
MMNLEASLSAITNSIRETLQSPNDLTVREFALSGSSTRCAVVFLCGITDKDLIYRFVIHP
CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHH
LQHEEIPPKGPIMQTLVDRFISIGEINTVKTFPDLVNSVLVGDTVVLIDGIPHALVINCR
HHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECC
AWEKRGLEPPITEDVIRGPKVGFVEDIATNKMLIRRELRDPKLRFQSYIMGQRSQKEVTL
HHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEE
IYIEDIINPYIVKELNRRLQSIKTDMILDSGKIEQLLEENTLSPFPQFLNTERPDRAIAA
EEHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHCCCCCHHHHHH
LAKGKAIILVDGSPFAILAPMVIVDIFQSPEDYYERWIMATLLRGLRMLAGLMAVLFPAV
HHCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIALVSYHQGLIPSNLAYSIAGAREGVPFPAYIETIIMTLTMELIREAGLRLPKQIGQTV
HHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
GIVGGLVIGEAAVNAGIVNPFMVIVTAITAIATFSLPVYSITITFRFLLFAFILAATIFG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LYGIILALIALAIHITNLKSVGIPYSTPLAPTFYKDWKAEVARLPKAMLQTRPDYLQTKD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
QIRSKERK
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]