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The map label for this gene is pagR [H]

Identifier: 152974358

GI number: 152974358

Start: 605434

End: 605721

Strand: Direct

Name: pagR [H]

Synonym: Bcer98_0529

Alternate gene names: 152974358

Gene position: 605434-605721 (Clockwise)

Preceding gene: 152974356

Following gene: 152974359

Centisome position: 14.81

GC content: 32.64

Gene sequence:

>288_bases
ATGAATCAAAATCAATTTGATTGTCGTATTTTAGAAGAAGATGTTCAAATGTTACGAGCTTTAGCTCATCCATTACGTTT
GCGCTTAGTAATGGAACTTATGCAACGTGGAACGTGCAATGTAACACAATTGCAGGAAGTATTAGAAATTCCGCAATCAA
CTGTTTCACAACATTTAACGAAACTAAAACAAAACAAGGTTGTTCGTTTTGAAAGACGAGGTTTAGAAGTATATTACCAA
GTGCATAATGATAAAGTAAGCAAAGTGGTAAAGACATTATTTTCATAA

Upstream 100 bases:

>100_bases
TTACCGTTTAGGTTGATAAAGTTGTGTCGTAACAGGAAATATAAAAACAAGTATATAAATAAATAAAGAGAAAATAAAAT
GAAAAAATGAGGGGAACTTT

Downstream 100 bases:

>100_bases
AATTTCAATATTTAGGAAAGACGTATAGAAATATACGTCTTTTTTTATGGAATACATTCAAAAAAATATGGAAAGATAGA
GAGGAGTGTATTTTGTAAAA

Product: regulatory protein ArsR

Products: NA

Alternate protein names: Protective antigen repressor [H]

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MNQNQFDCRILEEDVQMLRALAHPLRLRLVMELMQRGTCNVTQLQEVLEIPQSTVSQHLTKLKQNKVVRFERRGLEVYYQ
VHNDKVSKVVKTLFS

Sequences:

>Translated_95_residues
MNQNQFDCRILEEDVQMLRALAHPLRLRLVMELMQRGTCNVTQLQEVLEIPQSTVSQHLTKLKQNKVVRFERRGLEVYYQ
VHNDKVSKVVKTLFS
>Mature_95_residues
MNQNQFDCRILEEDVQMLRALAHPLRLRLVMELMQRGTCNVTQLQEVLEIPQSTVSQHLTKLKQNKVVRFERRGLEVYYQ
VHNDKVSKVVKTLFS

Specific function: Represses the expression of the pagA and atxA genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 11239; Mature: 11239

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQNQFDCRILEEDVQMLRALAHPLRLRLVMELMQRGTCNVTQLQEVLEIPQSTVSQHLT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHH
KLKQNKVVRFERRGLEVYYQVHNDKVSKVVKTLFS
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNQNQFDCRILEEDVQMLRALAHPLRLRLVMELMQRGTCNVTQLQEVLEIPQSTVSQHLT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHH
KLKQNKVVRFERRGLEVYYQVHNDKVSKVVKTLFS
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10419943; 10515943; 12004073; 12067380; 10475965 [H]