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The map label for this gene is yhdW [H]

Identifier: 152974338

GI number: 152974338

Start: 576590

End: 578440

Strand: Direct

Name: yhdW [H]

Synonym: Bcer98_0507

Alternate gene names: 152974338

Gene position: 576590-578440 (Clockwise)

Preceding gene: 152974337

Following gene: 152974339

Centisome position: 14.11

GC content: 31.12

Gene sequence:

>1851_bases
ATGTTGCACCGAAAAAAGCTATCTATACTAGGGGTCATGAAACATTCCTTTCAAACGGTACAATTTGCTTTTTGGAATGT
GTTGGCTTTTCAACTCATTTATAAATTATTAGCTGCGATTGTTTTTATACCGCTATTTGGTATGATTTTCAATAAATTAT
TATACTGGGGTGGTTATGCAAATGCTACAAATGATGAATTATTAGCATTTTTGAAAACACCATATGGAATATTAGCTGTT
GCTATTTTATCAATATTGGCGCTGTTTCTTATCTTTACAGAGTTTGCAGTGCTTATTATTCTTTCTTATTTTGCACATAA
ACGTCAAAAGGTAAAATTGCGCCCAGTTTTATATAAGACGGTAACATATTTATCTTCTCTTTTCACGTATTGCTTACCAG
GATTTATTTTGTATGCTGTTGTATTGTTACCTTTATTCGGATTCGGATATCAGTCTGCACTTATCCCAGACATTCAAATT
CCGAACTTTATAACAGGGGAATTATTTAAAACGACGATGGGGCAAGTTGGGTACTACGCTTTCTTTGCTATCGTCGCTTA
TATGAATCTTCGCTGGATATTTGTGTTGCCTATTATGGTATTAGAAAAGAAGTCATTTCGAATTGCTGCACGCAAAAGTG
CAAATTTAGTAAGAACAAATTTCTTGAAAGTATTGTTCTTTTTAATAGGCTTTTTAGTATCGATAGGAATTGTATTTTTG
TTATTTGCGGGAATATACTTTTTATCGATATGGGGAATATATGAATTTACAAATCCAAAAGGGACATTTGCTTTATTAGC
TGAATCAACTTTGTCAGTATTTTTAACGAGTACATTATATGTATTTAGTTTTATTATGACGCCATTTTATATTATGGCAT
TGACTAGATTTTATTTGCAGAAAGTTCCAGTAGAAGATGTTTTGTTAGAAGAAGGGTTAGATTATTCAAAAGCAAGAGCT
GAGAAATGTTTTTTTAAAAAACATCGCTTTAAATTCATTGGTGTATATATTGCTGGTGTGTTTACATTAGGAATGGCCGT
TGCTTTCATTGTCACTTTCATTTCTAATACGTATAGAGAACCAATTATTATGGCACATCGTGGTTATATTTCAAAAGGTG
TAGAAAACACGAGAGAAGCTGTACAAGGTGCGATTGATGCAAAGGCAGATTATGCTGAAATTGATGTGTTACAAACAAAG
GATGGTCAACTAGCGGTCATACACGATTTGAAATTAAAACGTCTTGCGAATGAGAATGTACAAGTTGCTGATTTGACAAT
GGATGAACTCCGTAAGCTAACCTTAAGACAAGATGGGTTTACAGGAAAAATTAGTACGTTAGATGAGATTATAAAGCTTG
CAAAAAATAATATAAAGCTCAATATAGAAGTAAAGTTACATGGAAATGAAAAAGACTTTGTAAAAAAGGTACTACAGACA
ATCAAAGAGAATGAGTTTGAAAAACAATGTGTTATTCAAACGTTACATTATTCTCTTATTCAAGAGTTTAAGCGTGAAAA
TCCAAATATAAAAGTAGGATATATTTTATATGCAAGTAGAGCGAATTTAAAATATGTACAAGCTGATTTTTATGTCGCGG
AAGAATATATGATAAATAAACAAATCGTAAAATCAGCAAGGAAATTAAATAAACCAATCTACGTTTGGACTGTAAATGAT
ATGGAGAATTTAAAGAAATATTATAAGTTGAATGTAGATGGAATTATTACAGATTATCCTGTAGATGCAAAAGAAACGAT
TAAGATGTTGAAAGAACAAGAAGAAAATGAAAATGATATGATCGATAAAGTTATTGAAACAACGGAAGATTTATTTTCTA
AGTTGTTTTGA

Upstream 100 bases:

>100_bases
TTGCGTTCGTTAGAATATATGATTAGTATAGAAAAGATGGACTTCTGATAAGAAATATGAAATCCATTTCAAACATCATT
TTTAGAATTTGGAGGACTTT

Downstream 100 bases:

>100_bases
TCTATACAAGCTTCCAAACAAAATGGTAATTTCTTTTTGAATTACCATTTTTGTTTGGAAAGCAGTAATTCAGATTTATC
ATACATGTTTAAAAAACATT

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MLHRKKLSILGVMKHSFQTVQFAFWNVLAFQLIYKLLAAIVFIPLFGMIFNKLLYWGGYANATNDELLAFLKTPYGILAV
AILSILALFLIFTEFAVLIILSYFAHKRQKVKLRPVLYKTVTYLSSLFTYCLPGFILYAVVLLPLFGFGYQSALIPDIQI
PNFITGELFKTTMGQVGYYAFFAIVAYMNLRWIFVLPIMVLEKKSFRIAARKSANLVRTNFLKVLFFLIGFLVSIGIVFL
LFAGIYFLSIWGIYEFTNPKGTFALLAESTLSVFLTSTLYVFSFIMTPFYIMALTRFYLQKVPVEDVLLEEGLDYSKARA
EKCFFKKHRFKFIGVYIAGVFTLGMAVAFIVTFISNTYREPIIMAHRGYISKGVENTREAVQGAIDAKADYAEIDVLQTK
DGQLAVIHDLKLKRLANENVQVADLTMDELRKLTLRQDGFTGKISTLDEIIKLAKNNIKLNIEVKLHGNEKDFVKKVLQT
IKENEFEKQCVIQTLHYSLIQEFKRENPNIKVGYILYASRANLKYVQADFYVAEEYMINKQIVKSARKLNKPIYVWTVND
MENLKKYYKLNVDGIITDYPVDAKETIKMLKEQEENENDMIDKVIETTEDLFSKLF

Sequences:

>Translated_616_residues
MLHRKKLSILGVMKHSFQTVQFAFWNVLAFQLIYKLLAAIVFIPLFGMIFNKLLYWGGYANATNDELLAFLKTPYGILAV
AILSILALFLIFTEFAVLIILSYFAHKRQKVKLRPVLYKTVTYLSSLFTYCLPGFILYAVVLLPLFGFGYQSALIPDIQI
PNFITGELFKTTMGQVGYYAFFAIVAYMNLRWIFVLPIMVLEKKSFRIAARKSANLVRTNFLKVLFFLIGFLVSIGIVFL
LFAGIYFLSIWGIYEFTNPKGTFALLAESTLSVFLTSTLYVFSFIMTPFYIMALTRFYLQKVPVEDVLLEEGLDYSKARA
EKCFFKKHRFKFIGVYIAGVFTLGMAVAFIVTFISNTYREPIIMAHRGYISKGVENTREAVQGAIDAKADYAEIDVLQTK
DGQLAVIHDLKLKRLANENVQVADLTMDELRKLTLRQDGFTGKISTLDEIIKLAKNNIKLNIEVKLHGNEKDFVKKVLQT
IKENEFEKQCVIQTLHYSLIQEFKRENPNIKVGYILYASRANLKYVQADFYVAEEYMINKQIVKSARKLNKPIYVWTVND
MENLKKYYKLNVDGIITDYPVDAKETIKMLKEQEENENDMIDKVIETTEDLFSKLF
>Mature_616_residues
MLHRKKLSILGVMKHSFQTVQFAFWNVLAFQLIYKLLAAIVFIPLFGMIFNKLLYWGGYANATNDELLAFLKTPYGILAV
AILSILALFLIFTEFAVLIILSYFAHKRQKVKLRPVLYKTVTYLSSLFTYCLPGFILYAVVLLPLFGFGYQSALIPDIQI
PNFITGELFKTTMGQVGYYAFFAIVAYMNLRWIFVLPIMVLEKKSFRIAARKSANLVRTNFLKVLFFLIGFLVSIGIVFL
LFAGIYFLSIWGIYEFTNPKGTFALLAESTLSVFLTSTLYVFSFIMTPFYIMALTRFYLQKVPVEDVLLEEGLDYSKARA
EKCFFKKHRFKFIGVYIAGVFTLGMAVAFIVTFISNTYREPIIMAHRGYISKGVENTREAVQGAIDAKADYAEIDVLQTK
DGQLAVIHDLKLKRLANENVQVADLTMDELRKLTLRQDGFTGKISTLDEIIKLAKNNIKLNIEVKLHGNEKDFVKKVLQT
IKENEFEKQCVIQTLHYSLIQEFKRENPNIKVGYILYASRANLKYVQADFYVAEEYMINKQIVKSARKLNKPIYVWTVND
MENLKKYYKLNVDGIITDYPVDAKETIKMLKEQEENENDMIDKVIETTEDLFSKLF

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to sn-glycerol 3-phosphate (G3P) and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GDPD domain [H]

Homologues:

Organism=Homo sapiens, GI260763876, Length=268, Percent_Identity=23.134328358209, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI260763878, Length=159, Percent_Identity=30.188679245283, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI260763880, Length=159, Percent_Identity=30.188679245283, Blast_Score=71, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 70968; Mature: 70968

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHRKKLSILGVMKHSFQTVQFAFWNVLAFQLIYKLLAAIVFIPLFGMIFNKLLYWGGYA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NATNDELLAFLKTPYGILAVAILSILALFLIFTEFAVLIILSYFAHKRQKVKLRPVLYKT
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHH
VTYLSSLFTYCLPGFILYAVVLLPLFGFGYQSALIPDIQIPNFITGELFKTTMGQVGYYA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
FFAIVAYMNLRWIFVLPIMVLEKKSFRIAARKSANLVRTNFLKVLFFLIGFLVSIGIVFL
HHHHHHHHHHHHHHHHHHHHHCCCCHHEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LFAGIYFLSIWGIYEFTNPKGTFALLAESTLSVFLTSTLYVFSFIMTPFYIMALTRFYLQ
HHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVPVEDVLLEEGLDYSKARAEKCFFKKHRFKFIGVYIAGVFTLGMAVAFIVTFISNTYRE
HCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PIIMAHRGYISKGVENTREAVQGAIDAKADYAEIDVLQTKDGQLAVIHDLKLKRLANENV
CEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCEEEEHHHHHHHHCCCCC
QVADLTMDELRKLTLRQDGFTGKISTLDEIIKLAKNNIKLNIEVKLHGNEKDFVKKVLQT
EEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHH
IKENEFEKQCVIQTLHYSLIQEFKRENPNIKVGYILYASRANLKYVQADFYVAEEYMINK
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEHHHHHHHHHHHHH
QIVKSARKLNKPIYVWTVNDMENLKKYYKLNVDGIITDYPVDAKETIKMLKEQEENENDM
HHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCHHHH
IDKVIETTEDLFSKLF
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLHRKKLSILGVMKHSFQTVQFAFWNVLAFQLIYKLLAAIVFIPLFGMIFNKLLYWGGYA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NATNDELLAFLKTPYGILAVAILSILALFLIFTEFAVLIILSYFAHKRQKVKLRPVLYKT
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHH
VTYLSSLFTYCLPGFILYAVVLLPLFGFGYQSALIPDIQIPNFITGELFKTTMGQVGYYA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
FFAIVAYMNLRWIFVLPIMVLEKKSFRIAARKSANLVRTNFLKVLFFLIGFLVSIGIVFL
HHHHHHHHHHHHHHHHHHHHHCCCCHHEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LFAGIYFLSIWGIYEFTNPKGTFALLAESTLSVFLTSTLYVFSFIMTPFYIMALTRFYLQ
HHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVPVEDVLLEEGLDYSKARAEKCFFKKHRFKFIGVYIAGVFTLGMAVAFIVTFISNTYRE
HCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PIIMAHRGYISKGVENTREAVQGAIDAKADYAEIDVLQTKDGQLAVIHDLKLKRLANENV
CEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCEEEEHHHHHHHHCCCCC
QVADLTMDELRKLTLRQDGFTGKISTLDEIIKLAKNNIKLNIEVKLHGNEKDFVKKVLQT
EEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHH
IKENEFEKQCVIQTLHYSLIQEFKRENPNIKVGYILYASRANLKYVQADFYVAEEYMINK
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEHHHHHHHHHHHHH
QIVKSARKLNKPIYVWTVNDMENLKKYYKLNVDGIITDYPVDAKETIKMLKEQEENENDM
HHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCHHHH
IDKVIETTEDLFSKLF
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]