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The map label for this gene is ydiC [H]

Identifier: 152974088

GI number: 152974088

Start: 262311

End: 263003

Strand: Direct

Name: ydiC [H]

Synonym: Bcer98_0244

Alternate gene names: 152974088

Gene position: 262311-263003 (Clockwise)

Preceding gene: 152974087

Following gene: 152974089

Centisome position: 6.42

GC content: 35.5

Gene sequence:

>693_bases
ATGAAAGTACTAGCAATTGATACTTCAAATTACGTAATGGGTGTTTCTCTTATTGAGGGAGATACTGTTATCGGGGAAAT
CATTACAAATTTAACAAAGAATCATTCTATACGCCTTATGCCAGCTGTAGATCAACTTTTAAAGGAATGTAATGTCAAAC
CGAAAGAACTAAATAAGATTGTTGTAGCAGCTGGTCCAGGATCGTATACAGGTGTGCGTATTGGTGTAACAGTTGCCAAA
ACATTAGCATGGTCATTACAAATACCAATTGTTGGCGTATCTAGTTTAGAAGTGATAGCAGCGAACGGAGCGAATTTCCA
AGGTCTTATTTGCCCTTTATTTGATGGCCGACGTGGACAAATTTATACAGGATTATATACATACGAGAAAGAACAGTTAA
CTTCTATAGAAGATGATCGTATTGTTCTAATTGTAGATTGGTTACAAATGTTGAAAGAGAAAAAACAACCTGTTTTATTT
ATTGGTAACGATGTGAAAATGCATCAGAAAACAATTGTAGAGCATCTAGGTGATCAAGCGATATTTGCTCCTTTTACAAA
GAATAATCCAAGACCGAGTGAACTTGCATTTTTAGGTTTACAAAAAGAAGAGCAAAATGTACATACATTTGTACCGAGCT
ATTTGCGTTTAGCTGAAGCGGAGACCAAATGGTTAGAAAGCCAAAAGAAATAG

Upstream 100 bases:

>100_bases
TTAAAAATTAGCATATTTCATGCTGGAAATGATACAAGAAAGATTGTATTAGAACCAGAAGGAGACCGCTATATTAGATT
ATGTGAGGAGCTATTACAAA

Downstream 100 bases:

>100_bases
GAGATATTAAAATGGGTATTACATTTAGAAAGATGACAACTGATGATATTGCTCAAGTGGTAGCGATTGAAGAAGCGTCT
TTCCCAACTCCTTGGACTGC

Product: peptidase M22 glycoprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKVLAIDTSNYVMGVSLIEGDTVIGEIITNLTKNHSIRLMPAVDQLLKECNVKPKELNKIVVAAGPGSYTGVRIGVTVAK
TLAWSLQIPIVGVSSLEVIAANGANFQGLICPLFDGRRGQIYTGLYTYEKEQLTSIEDDRIVLIVDWLQMLKEKKQPVLF
IGNDVKMHQKTIVEHLGDQAIFAPFTKNNPRPSELAFLGLQKEEQNVHTFVPSYLRLAEAETKWLESQKK

Sequences:

>Translated_230_residues
MKVLAIDTSNYVMGVSLIEGDTVIGEIITNLTKNHSIRLMPAVDQLLKECNVKPKELNKIVVAAGPGSYTGVRIGVTVAK
TLAWSLQIPIVGVSSLEVIAANGANFQGLICPLFDGRRGQIYTGLYTYEKEQLTSIEDDRIVLIVDWLQMLKEKKQPVLF
IGNDVKMHQKTIVEHLGDQAIFAPFTKNNPRPSELAFLGLQKEEQNVHTFVPSYLRLAEAETKWLESQKK
>Mature_230_residues
MKVLAIDTSNYVMGVSLIEGDTVIGEIITNLTKNHSIRLMPAVDQLLKECNVKPKELNKIVVAAGPGSYTGVRIGVTVAK
TLAWSLQIPIVGVSSLEVIAANGANFQGLICPLFDGRRGQIYTGLYTYEKEQLTSIEDDRIVLIVDWLQMLKEKKQPVLF
IGNDVKMHQKTIVEHLGDQAIFAPFTKNNPRPSELAFLGLQKEEQNVHTFVPSYLRLAEAETKWLESQKK

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=145, Percent_Identity=29.6551724137931, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 25605; Mature: 25605

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLAIDTSNYVMGVSLIEGDTVIGEIITNLTKNHSIRLMPAVDQLLKECNVKPKELNKI
CEEEEEECCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCHHHCCEE
VVAAGPGSYTGVRIGVTVAKTLAWSLQIPIVGVSSLEVIAANGANFQGLICPLFDGRRGQ
EEEECCCCCCEEEEEEEEEEHEEEEEEEEEEECCCEEEEEECCCCCCEEEEEECCCCCCE
IYTGLYTYEKEQLTSIEDDRIVLIVDWLQMLKEKKQPVLFIGNDVKMHQKTIVEHLGDQA
EEEEEEEECHHHHCCCCCCCEEEEHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCE
IFAPFTKNNPRPSELAFLGLQKEEQNVHTFVPSYLRLAEAETKWLESQKK
EEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKVLAIDTSNYVMGVSLIEGDTVIGEIITNLTKNHSIRLMPAVDQLLKECNVKPKELNKI
CEEEEEECCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCHHHCCEE
VVAAGPGSYTGVRIGVTVAKTLAWSLQIPIVGVSSLEVIAANGANFQGLICPLFDGRRGQ
EEEECCCCCCEEEEEEEEEEHEEEEEEEEEEECCCEEEEEECCCCCCEEEEEECCCCCCE
IYTGLYTYEKEQLTSIEDDRIVLIVDWLQMLKEKKQPVLFIGNDVKMHQKTIVEHLGDQA
EEEEEEEECHHHHCCCCCCCEEEEHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCE
IFAPFTKNNPRPSELAFLGLQKEEQNVHTFVPSYLRLAEAETKWLESQKK
EEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]