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The map label for this gene is ydhJ [H]

Identifier: 152970535

GI number: 152970535

Start: 2178111

End: 2179007

Strand: Direct

Name: ydhJ [H]

Synonym: KPN_01983

Alternate gene names: 152970535

Gene position: 2178111-2179007 (Clockwise)

Preceding gene: 152970534

Following gene: 152970536

Centisome position: 40.98

GC content: 59.75

Gene sequence:

>897_bases
ATGAAAAGATTAAAATATCTGTCAACGCTGCTGGTCGCGGCCGTCGCCCTGATTGCCGCATGGTTGTTATGGAATTTCTA
CACTCAGTCACCCTGGACCCGCGACGGCAAAGTGCGCGCCGAGCAGGTTGGGATCACCCCTCAGGTCTCCGGCAGTATTC
TGCAGTTGAACGTAACCGATAACCAACGGGTCAAAGCCGGGGAAGTATTGTTTACCATCGACGACACCCCCTATCGCATC
GCGGTGCTGAACGCCCAGGCGCAGCTGGCGAAAGCCCAGGCGGAGGTGGCGAAAGCGCAGGCGGAGCAAAGCAAGGCCGC
CAGCGAGGCTCGCCGTCGCCGAAGCCTGTCGCAAAATGCCATCTCGGCTGAAGACCTTGAGAACGTCAATACCGCCCTGA
ATACCGCCACCACCACCCTGGCTGCCGCCAGAGCGGGGGTCGGCGTAACCGAAGCGGCGCTGAAACATGCGCAGTGGCAG
CTCAGCCAGACGGTTGTCAAAGCGCCGGTGGATGGCTGGGTGACCAACCTTTCCACCCGCGTCGGTGATTACGCTACCAC
CGGCCATCCGGTCTTTGCCCTGGTGGACAGCCACTCGTTTTACGTGCTGGGCTACTTCGAAGAGACCAAACTGCGCCACA
TTCGCATCGGCGATCCGGCACAAATTATTCTCTATAGCAATCAGCAGACGCTAAAGGGCCATGTCGCGAGCATCGGCCGC
GCGATTGTCGACCAGAGCGTGGAACAGGGAACCGGGCTGGTGGCCAACATCAAACCAAATATCCCCTGGGTTCGTCTCGC
CCAACGCGTTCCGGTGCGAATTGCCTTTGATACGCTGCCGGCCGATGTCACCCTGGTCTCCGGCACCACCTGCACTGTCT
CAATTGGCGGGCAGTAA

Upstream 100 bases:

>100_bases
GCGGGCGACATCTGGCACCCGCTACTAATGGATCTCTCCCTGTTCGCGCTCTCGGTCTGTCTGGCCCTGGTATTACTCAT
TGCCTGGTGATCTCCCTGTT

Downstream 100 bases:

>100_bases
TGAACCTGCAGACCCTGTCGTGGCGCGCACTCCCCTGGGTTAAAGCCACCCGGCCGCAGTGGCGGTACGCATTGCGCAAC
GGCATCGCGATGTGTCTTGC

Product: putative multidrug resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MKRLKYLSTLLVAAVALIAAWLLWNFYTQSPWTRDGKVRAEQVGITPQVSGSILQLNVTDNQRVKAGEVLFTIDDTPYRI
AVLNAQAQLAKAQAEVAKAQAEQSKAASEARRRRSLSQNAISAEDLENVNTALNTATTTLAAARAGVGVTEAALKHAQWQ
LSQTVVKAPVDGWVTNLSTRVGDYATTGHPVFALVDSHSFYVLGYFEETKLRHIRIGDPAQIILYSNQQTLKGHVASIGR
AIVDQSVEQGTGLVANIKPNIPWVRLAQRVPVRIAFDTLPADVTLVSGTTCTVSIGGQ

Sequences:

>Translated_298_residues
MKRLKYLSTLLVAAVALIAAWLLWNFYTQSPWTRDGKVRAEQVGITPQVSGSILQLNVTDNQRVKAGEVLFTIDDTPYRI
AVLNAQAQLAKAQAEVAKAQAEQSKAASEARRRRSLSQNAISAEDLENVNTALNTATTTLAAARAGVGVTEAALKHAQWQ
LSQTVVKAPVDGWVTNLSTRVGDYATTGHPVFALVDSHSFYVLGYFEETKLRHIRIGDPAQIILYSNQQTLKGHVASIGR
AIVDQSVEQGTGLVANIKPNIPWVRLAQRVPVRIAFDTLPADVTLVSGTTCTVSIGGQ
>Mature_298_residues
MKRLKYLSTLLVAAVALIAAWLLWNFYTQSPWTRDGKVRAEQVGITPQVSGSILQLNVTDNQRVKAGEVLFTIDDTPYRI
AVLNAQAQLAKAQAEVAKAQAEQSKAASEARRRRSLSQNAISAEDLENVNTALNTATTTLAAARAGVGVTEAALKHAQWQ
LSQTVVKAPVDGWVTNLSTRVGDYATTGHPVFALVDSHSFYVLGYFEETKLRHIRIGDPAQIILYSNQQTLKGHVASIGR
AIVDQSVEQGTGLVANIKPNIPWVRLAQRVPVRIAFDTLPADVTLVSGTTCTVSIGGQ

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=296, Percent_Identity=64.527027027027, Blast_Score=402, Evalue=1e-113,
Organism=Escherichia coli, GI1789637, Length=290, Percent_Identity=41.7241379310345, Blast_Score=205, Evalue=3e-54,
Organism=Escherichia coli, GI1790519, Length=297, Percent_Identity=34.006734006734, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1788711, Length=316, Percent_Identity=30.0632911392405, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1789041, Length=307, Percent_Identity=25.7328990228013, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1790024, Length=270, Percent_Identity=25.1851851851852, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1790012, Length=259, Percent_Identity=26.2548262548263, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 32225; Mature: 32225

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLKYLSTLLVAAVALIAAWLLWNFYTQSPWTRDGKVRAEQVGITPQVSGSILQLNVTD
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHCCCCCCCCCCEEEEEECC
NQRVKAGEVLFTIDDTPYRIAVLNAQAQLAKAQAEVAKAQAEQSKAASEARRRRSLSQNA
CCCEEECEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ISAEDLENVNTALNTATTTLAAARAGVGVTEAALKHAQWQLSQTVVKAPVDGWVTNLSTR
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VGDYATTGHPVFALVDSHSFYVLGYFEETKLRHIRIGDPAQIILYSNQQTLKGHVASIGR
CCCCCCCCCCEEEEEECCCEEEEEEEECCCEEEEEECCCEEEEEECCCHHHHHHHHHHHH
AIVDQSVEQGTGLVANIKPNIPWVRLAQRVPVRIAFDTLPADVTLVSGTTCTVSIGGQ
HHHHHHHHHCCCEEEEECCCCCHHHHHCCCCEEEEEECCCCCEEEEECCEEEEEECCC
>Mature Secondary Structure
MKRLKYLSTLLVAAVALIAAWLLWNFYTQSPWTRDGKVRAEQVGITPQVSGSILQLNVTD
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHCCCCCCCCCCEEEEEECC
NQRVKAGEVLFTIDDTPYRIAVLNAQAQLAKAQAEVAKAQAEQSKAASEARRRRSLSQNA
CCCEEECEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ISAEDLENVNTALNTATTTLAAARAGVGVTEAALKHAQWQLSQTVVKAPVDGWVTNLSTR
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VGDYATTGHPVFALVDSHSFYVLGYFEETKLRHIRIGDPAQIILYSNQQTLKGHVASIGR
CCCCCCCCCCEEEEEECCCEEEEEEEECCCEEEEEECCCEEEEEECCCHHHHHHHHHHHH
AIVDQSVEQGTGLVANIKPNIPWVRLAQRVPVRIAFDTLPADVTLVSGTTCTVSIGGQ
HHHHHHHHHCCCEEEEECCCCCHHHHHCCCCEEEEEECCCCCEEEEECCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]