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The map label for this gene is scrY [H]

Identifier: 152970444

GI number: 152970444

Start: 2087201

End: 2088817

Strand: Direct

Name: scrY [H]

Synonym: KPN_01892

Alternate gene names: 152970444

Gene position: 2087201-2088817 (Clockwise)

Preceding gene: 152970443

Following gene: 152970457

Centisome position: 39.27

GC content: 59.68

Gene sequence:

>1617_bases
ATGCGTATCTCTGTGATTAGCGCAGCGGTTTGCTGCGCCCTTTTTCCGCTCATCAGCGTCAGCGCCGCCGGCTTGAGCGT
GGAGCAACGGCTGGCGCAGCTGGAAGCGCGCCTCAATCTCGCTGAACAGCAGGCCAGCGAGGCCAGCCGCCGCGCGCAGC
GGGCAGAACAGCAAACTGCCGCCGCCGAGCAGCGCGCCGCGGCGGCGGAGCAGCAGGTGCAGGCGCTCAGCCAGCAGACC
ACGGCTCGCGAACAAAAACAGCAGGCCACTAATCAGCAACTGAGCGAGCAGCTGGCGAAGCGCGCCCCGGACGATGGGTT
TACCTTTAACGCCTACGCCCGTTCCGGGATGTTAGTCAACAGCCATGGTAAAGGCGCCCGCGGCGGGCCGGGCGTCTCCC
CGGCCAGTTCGCTCAACGGCGATGCCCATGTCGGTCGTCTCGGTAACGAAAAAGATAATTACGCTGAGCTGAGCTTTGGC
AAAAAGCTCACCTTCAACGATGGCTCATGGGCGCGCTTCAAGACCATGCTCGCCGACGGGGCCACCAACCCGGATCCGTG
GGTTCAGGATAACGACAGCCACCATCTGAACATTCGTCAGCTGTACGTCGAGATGGGTAACTTTGCCGAATTCACCGGTC
CGTTAAAACGCGCCTCAATTTGGGCCGGCAAGCGCTTCGATCGGGATAACTTCGATATCCACTTTACCGATAGCGACATC
ATGTTCCTCGGCGGTACCGGCGGCGGGATCAATGATGTCGACTGGGGAAGCGGCCTGCGCGGCGACTATTCGGTGTATGC
ACGTAACTTCGGCGACCTTGGCAGCGATAATTACGCGGATAATGACATCCAGAATCTGCTGTTCACCGCCAACCATTTTT
ACGGCAACTGGCAACTGATGACCACGGTGATGACCGCCCAGGGCAACGATGACCTGAAAGATAATACCTCGACCACCGGG
AGCTATGCCCTGCGCAGCGATAACACCGCCAAAAACGGCTACTACGCGATGCTGGCCCTCCACGACAAACAGCAGTTCTA
CGGCCTGGCGCCGGGGGTGTCTGAAAGCGCCCTGCAATACGGCGTCGGGCTGGGCGCCGAAGCGCGTCAGCCGGGGAGCG
ATGGCGATCTGACCGAGAACGCGGCCTCCCTGCGCTTTGCGTCGTATGGCATCCTGCCGTTGGGGAAAAACTGGCAGCTG
GCGCCGTCGGTGATAGCCCAGCATAGCGAAGACCGCTATCGCGACGGCGACCGCTACGACTGGGCGACGTTTAACCTGCG
GGTATCACAGGGGATCTCCGCTCACTTCGCCCTGCTGTATGAGGCCTCGTGGCAGTATATGGATCTCAATCCGAACGGGC
GCAGCTATCGCTATAATGACAACGTTTATCAGTATCAGGCGGTGCGCGGTGATTTCTACAAGCTGACCTTCGCCCCCACC
TTTAAAGTGGGCGATGTGCTGGATATCAAGGCGCGGCCGGAAATCCGCTTCTTTGCCACCTGGATGAACTGGGATAAAGC
GCTGGATCGCTACGCGATAAATGACGATTTCGGCAGCAAAGGCTTTACCGCTGGCGGGACATGGAACTTCGGCGTGCAGA
CGGAGATTTGGTTTTAA

Upstream 100 bases:

>100_bases
GGACGCGGCGCCTCGCCAGCCCCGGCCCCGACCGCCGGAGAATCCCCCGCCATGTAAGGCGCCCCCGCTGATTTAACCTC
TGGATAAATTAAGGATTTTT

Downstream 100 bases:

>100_bases
TCAAACGGCCCGTCCGGCTCAAATGCCAGGACGGGTTGATTTAAATACACGCTGTTACTTTGTCACTATGCCAGTGCTGT
ATGAAGTAATATAAACTCAT

Product: putative maltoporin precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 538; Mature: 538

Protein sequence:

>538_residues
MRISVISAAVCCALFPLISVSAAGLSVEQRLAQLEARLNLAEQQASEASRRAQRAEQQTAAAEQRAAAAEQQVQALSQQT
TAREQKQQATNQQLSEQLAKRAPDDGFTFNAYARSGMLVNSHGKGARGGPGVSPASSLNGDAHVGRLGNEKDNYAELSFG
KKLTFNDGSWARFKTMLADGATNPDPWVQDNDSHHLNIRQLYVEMGNFAEFTGPLKRASIWAGKRFDRDNFDIHFTDSDI
MFLGGTGGGINDVDWGSGLRGDYSVYARNFGDLGSDNYADNDIQNLLFTANHFYGNWQLMTTVMTAQGNDDLKDNTSTTG
SYALRSDNTAKNGYYAMLALHDKQQFYGLAPGVSESALQYGVGLGAEARQPGSDGDLTENAASLRFASYGILPLGKNWQL
APSVIAQHSEDRYRDGDRYDWATFNLRVSQGISAHFALLYEASWQYMDLNPNGRSYRYNDNVYQYQAVRGDFYKLTFAPT
FKVGDVLDIKARPEIRFFATWMNWDKALDRYAINDDFGSKGFTAGGTWNFGVQTEIWF

Sequences:

>Translated_538_residues
MRISVISAAVCCALFPLISVSAAGLSVEQRLAQLEARLNLAEQQASEASRRAQRAEQQTAAAEQRAAAAEQQVQALSQQT
TAREQKQQATNQQLSEQLAKRAPDDGFTFNAYARSGMLVNSHGKGARGGPGVSPASSLNGDAHVGRLGNEKDNYAELSFG
KKLTFNDGSWARFKTMLADGATNPDPWVQDNDSHHLNIRQLYVEMGNFAEFTGPLKRASIWAGKRFDRDNFDIHFTDSDI
MFLGGTGGGINDVDWGSGLRGDYSVYARNFGDLGSDNYADNDIQNLLFTANHFYGNWQLMTTVMTAQGNDDLKDNTSTTG
SYALRSDNTAKNGYYAMLALHDKQQFYGLAPGVSESALQYGVGLGAEARQPGSDGDLTENAASLRFASYGILPLGKNWQL
APSVIAQHSEDRYRDGDRYDWATFNLRVSQGISAHFALLYEASWQYMDLNPNGRSYRYNDNVYQYQAVRGDFYKLTFAPT
FKVGDVLDIKARPEIRFFATWMNWDKALDRYAINDDFGSKGFTAGGTWNFGVQTEIWF
>Mature_538_residues
MRISVISAAVCCALFPLISVSAAGLSVEQRLAQLEARLNLAEQQASEASRRAQRAEQQTAAAEQRAAAAEQQVQALSQQT
TAREQKQQATNQQLSEQLAKRAPDDGFTFNAYARSGMLVNSHGKGARGGPGVSPASSLNGDAHVGRLGNEKDNYAELSFG
KKLTFNDGSWARFKTMLADGATNPDPWVQDNDSHHLNIRQLYVEMGNFAEFTGPLKRASIWAGKRFDRDNFDIHFTDSDI
MFLGGTGGGINDVDWGSGLRGDYSVYARNFGDLGSDNYADNDIQNLLFTANHFYGNWQLMTTVMTAQGNDDLKDNTSTTG
SYALRSDNTAKNGYYAMLALHDKQQFYGLAPGVSESALQYGVGLGAEARQPGSDGDLTENAASLRFASYGILPLGKNWQL
APSVIAQHSEDRYRDGDRYDWATFNLRVSQGISAHFALLYEASWQYMDLNPNGRSYRYNDNVYQYQAVRGDFYKLTFAPT
FKVGDVLDIKARPEIRFFATWMNWDKALDRYAINDDFGSKGFTAGGTWNFGVQTEIWF

Specific function: Porin for sucrose uptake [H]

COG id: COG4580

COG function: function code G; Maltoporin (phage lambda and maltose receptor)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the porin LamB (TC 1.B.3) family [H]

Homologues:

Organism=Escherichia coli, GI1790469, Length=469, Percent_Identity=25.3731343283582, Blast_Score=78, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003192
- ProDom:   PD008788 [H]

Pfam domain/function: PF02264 LamB [H]

EC number: NA

Molecular weight: Translated: 59533; Mature: 59533

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISVISAAVCCALFPLISVSAAGLSVEQRLAQLEARLNLAEQQASEASRRAQRAEQQTA
CEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAEQRAAAAEQQVQALSQQTTAREQKQQATNQQLSEQLAKRAPDDGFTFNAYARSGMLVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEE
SHGKGARGGPGVSPASSLNGDAHVGRLGNEKDNYAELSFGKKLTFNDGSWARFKTMLADG
CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHCC
ATNPDPWVQDNDSHHLNIRQLYVEMGNFAEFTGPLKRASIWAGKRFDRDNFDIHFTDSDI
CCCCCCCCCCCCCCEEEHHHEEHHHCCHHHHCCCHHHHHHHCCCCCCCCCCEEEEECCCE
MFLGGTGGGINDVDWGSGLRGDYSVYARNFGDLGSDNYADNDIQNLLFTANHFYGNWQLM
EEEECCCCCCCCCCCCCCCCCCHHEEECCCCCCCCCCCCCHHHHHHHHHHHCEECCEEEE
TTVMTAQGNDDLKDNTSTTGSYALRSDNTAKNGYYAMLALHDKQQFYGLAPGVSESALQY
EEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCHHHEECCCCCCHHHHHH
GVGLGAEARQPGSDGDLTENAASLRFASYGILPLGKNWQLAPSVIAQHSEDRYRDGDRYD
CCCCCCCCCCCCCCCCCCCCHHHEEEEEECCEECCCCCCCCHHHHHHCCCHHCCCCCCEE
WATFNLRVSQGISAHFALLYEASWQYMDLNPNGRSYRYNDNVYQYQAVRGDFYKLTFAPT
EEEEEEEECCCCCEEEEEEEECCCEEEEECCCCCCEEECCCEEEEEEECCCEEEEEEECC
FKVGDVLDIKARPEIRFFATWMNWDKALDRYAINDDFGSKGFTAGGTWNFGVQTEIWF
CCCCCEEEECCCCCEEEEEEECCHHHHHHHEECCCCCCCCCCCCCCEECCCEEEEECC
>Mature Secondary Structure
MRISVISAAVCCALFPLISVSAAGLSVEQRLAQLEARLNLAEQQASEASRRAQRAEQQTA
CEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAEQRAAAAEQQVQALSQQTTAREQKQQATNQQLSEQLAKRAPDDGFTFNAYARSGMLVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEE
SHGKGARGGPGVSPASSLNGDAHVGRLGNEKDNYAELSFGKKLTFNDGSWARFKTMLADG
CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHCC
ATNPDPWVQDNDSHHLNIRQLYVEMGNFAEFTGPLKRASIWAGKRFDRDNFDIHFTDSDI
CCCCCCCCCCCCCCEEEHHHEEHHHCCHHHHCCCHHHHHHHCCCCCCCCCCEEEEECCCE
MFLGGTGGGINDVDWGSGLRGDYSVYARNFGDLGSDNYADNDIQNLLFTANHFYGNWQLM
EEEECCCCCCCCCCCCCCCCCCHHEEECCCCCCCCCCCCCHHHHHHHHHHHCEECCEEEE
TTVMTAQGNDDLKDNTSTTGSYALRSDNTAKNGYYAMLALHDKQQFYGLAPGVSESALQY
EEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCHHHEECCCCCCHHHHHH
GVGLGAEARQPGSDGDLTENAASLRFASYGILPLGKNWQLAPSVIAQHSEDRYRDGDRYD
CCCCCCCCCCCCCCCCCCCCHHHEEEEEECCEECCCCCCCCHHHHHHCCCHHCCCCCCEE
WATFNLRVSQGISAHFALLYEASWQYMDLNPNGRSYRYNDNVYQYQAVRGDFYKLTFAPT
EEEEEEEECCCCCEEEEEEEECCCEEEEECCCCCCEEECCCEEEEEEECCCEEEEEEECC
FKVGDVLDIKARPEIRFFATWMNWDKALDRYAINDDFGSKGFTAGGTWNFGVQTEIWF
CCCCCEEEECCCCCEEEEEEECCHHHHHHHEECCCCCCCCCCCCCCEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1846143; 1649946; 9437428 [H]