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The map label for this gene is ynfC [H]

Identifier: 152970134

GI number: 152970134

Start: 1759395

End: 1760096

Strand: Direct

Name: ynfC [H]

Synonym: KPN_01582

Alternate gene names: 152970134

Gene position: 1759395-1760096 (Clockwise)

Preceding gene: 152970127

Following gene: 152970137

Centisome position: 33.1

GC content: 57.98

Gene sequence:

>702_bases
TTGTATTGGCTGATCCCGGCAGCGCTGCTGCTGACGGCATGCGACCGTAAAAGCGCCCCGGACGCCTTCACCCCGGAGAT
GGCGAGTTTTTCCAATGAGTTTGAGTTTGATCCCCTGCGCGGGCCGGTGAAAGATTTTAGCCAGACGCTGCTGGATGAAC
ACGATGTGGTGGTCAAGAAGGTGAGCGCTCAGCTCTCCAGGGAAGGGTGTTTCGATCTGCTGACCCTGGAAGATGTGGAG
AACAAAACCGGCGCCACGCTGCTGCTGGACGCCAACTATTACGTCGACGGGCGCACCCACGAGAAGCGGCTGCGCCTGCA
GGGCAAGTGTCAGCTGGCGGAGATGCCTGCCGCCGGGGTGAGTTGGGAGACGGATGATAACGGTTTTATTATCAGCGCAC
GCGGCAAAGAGACCACCGCCACCTACCGCTATGACAGCGATGGCTATCCGCTGGGAAAAACCACCACCGCCAAAGAGGAG
CGATTTACCGTCGCCTCAACGCCGTCAAAGGATCCGCGTAAGAAATTGGACTATACCGCCATCAGCACCTTCAACGATCG
CACGCTGGGCACGGTGCGTCAGACCTGCGACTACGACGATCACGACAATCCGCTGAGCTGTGAGCTGCAGGTGATCGATG
AAAGCGTCCAGCCGCCGCTGACCCGCCACTACACCATTAAAAACCGTATCGATTATTACTGA

Upstream 100 bases:

>100_bases
TTATCGATGTTATCCAGATTTAAGCATAGCAGAACTGGTGTAAACAATTGTATTTGCTAATATGATCGGATGTACACAAA
AGGAATCGTCTGTGAAAAGA

Downstream 100 bases:

>100_bases
GCCGTCGGCTTCAGCAGGGACGGCCCGGGCGTTTTGTGCTCGGCCAGATACTGGTGCTGGAACAGGCACATGCGGATGGT
GTTGCGGTACTCGCCGTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MYWLIPAALLLTACDRKSAPDAFTPEMASFSNEFEFDPLRGPVKDFSQTLLDEHDVVVKKVSAQLSREGCFDLLTLEDVE
NKTGATLLLDANYYVDGRTHEKRLRLQGKCQLAEMPAAGVSWETDDNGFIISARGKETTATYRYDSDGYPLGKTTTAKEE
RFTVASTPSKDPRKKLDYTAISTFNDRTLGTVRQTCDYDDHDNPLSCELQVIDESVQPPLTRHYTIKNRIDYY

Sequences:

>Translated_233_residues
MYWLIPAALLLTACDRKSAPDAFTPEMASFSNEFEFDPLRGPVKDFSQTLLDEHDVVVKKVSAQLSREGCFDLLTLEDVE
NKTGATLLLDANYYVDGRTHEKRLRLQGKCQLAEMPAAGVSWETDDNGFIISARGKETTATYRYDSDGYPLGKTTTAKEE
RFTVASTPSKDPRKKLDYTAISTFNDRTLGTVRQTCDYDDHDNPLSCELQVIDESVQPPLTRHYTIKNRIDYY
>Mature_233_residues
MYWLIPAALLLTACDRKSAPDAFTPEMASFSNEFEFDPLRGPVKDFSQTLLDEHDVVVKKVSAQLSREGCFDLLTLEDVE
NKTGATLLLDANYYVDGRTHEKRLRLQGKCQLAEMPAAGVSWETDDNGFIISARGKETTATYRYDSDGYPLGKTTTAKEE
RFTVASTPSKDPRKKLDYTAISTFNDRTLGTVRQTCDYDDHDNPLSCELQVIDESVQPPLTRHYTIKNRIDYY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0257 family [H]

Homologues:

Organism=Escherichia coli, GI87081939, Length=234, Percent_Identity=61.1111111111111, Blast_Score=309, Evalue=8e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010646
- ProDom:   PD120112 [H]

Pfam domain/function: PF06788 UPF0257 [H]

EC number: NA

Molecular weight: Translated: 26359; Mature: 26359

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYWLIPAALLLTACDRKSAPDAFTPEMASFSNEFEFDPLRGPVKDFSQTLLDEHDVVVKK
CEEHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHH
VSAQLSREGCFDLLTLEDVENKTGATLLLDANYYVDGRTHEKRLRLQGKCQLAEMPAAGV
HHHHHHHCCCEEEEEECCCCCCCCCEEEEECCEEECCCCHHHHEEECCCEEEECCCCCCC
SWETDDNGFIISARGKETTATYRYDSDGYPLGKTTTAKEERFTVASTPSKDPRKKLDYTA
CEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCEEE
ISTFNDRTLGTVRQTCDYDDHDNPLSCELQVIDESVQPPLTRHYTIKNRIDYY
EECCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MYWLIPAALLLTACDRKSAPDAFTPEMASFSNEFEFDPLRGPVKDFSQTLLDEHDVVVKK
CEEHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHH
VSAQLSREGCFDLLTLEDVENKTGATLLLDANYYVDGRTHEKRLRLQGKCQLAEMPAAGV
HHHHHHHCCCEEEEEECCCCCCCCCEEEEECCEEECCCCHHHHEEECCCEEEECCCCCCC
SWETDDNGFIISARGKETTATYRYDSDGYPLGKTTTAKEERFTVASTPSKDPRKKLDYTA
CEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCEEE
ISTFNDRTLGTVRQTCDYDDHDNPLSCELQVIDESVQPPLTRHYTIKNRIDYY
EECCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA