| Definition | Klebsiella pneumoniae subsp. pneumoniae MGH 78578 chromosome, complete genome. |
|---|---|
| Accession | NC_009648 |
| Length | 5,315,120 |
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The map label for this gene is 152969882
Identifier: 152969882
GI number: 152969882
Start: 1492806
End: 1495325
Strand: Direct
Name: 152969882
Synonym: KPN_01329
Alternate gene names: NA
Gene position: 1492806-1495325 (Clockwise)
Preceding gene: 152969881
Following gene: 152969883
Centisome position: 28.09
GC content: 60.48
Gene sequence:
>2520_bases ATGAGTAGCGTTAAATCGTTGTTGTTCAGCCATAACCACCACCTGCTTTCGGTGAAGGGATGTGAAGCCGGGCTTGATGT GCTGGCCTTCGAGGGCGATGAAGCCCTGAGCCAGCCGTTCCGCTACCGTATTGAATTCACCAGCGCAGACCATGCCATCA GCAAAGAGATGATGCTGATGAAGGCAGCCTCCCTGACGCTGCAGGCGCCGGTGGCTCAGGGCTTCGGCATCAATGTTCAG CAACCCGTGCGGGTGATCCAGGGCGTGGTGACGGGGTTTGAACGGCTCAGTACCTCCAGGGATGAAACGCACTACGCGCT GACGCTTCAGCCGCGCCTGGCGCTGCTTAACCGCTCGCACCAGAACGCCATTTACCAGGACCAGTCCGTTCCGCAGATTG TGGAAAAAATCCTCCGCGAGCGCCACGGCCTGCGCGGTCAGGATTTTCTGTTCTCGCTGACAAAAACGTATCCGCGCCGC GAGCAGGTGATGCAGTACGGCGAGGATGACCTGCGCTTTATCACCCGGCTGCTGGGTGAGGTGGGGATCTGGTTTCGCTT TACCGCCGACAAGCGGCTGCACATCGACGTCGCTGAGTTCTGCGACAGTCAGCAGGGCTATGAGAAGGGGCTGACGTTGC CTTCGGTCCCGCCGTCAGGGCAGCAGTCGGCCGGGGTGGACGCGGTGTGGGAGATGGCATGCCGCCACCGCGTCGTGGAG CAGCAGGTCAGTACCCGCGACTACAACTACCGCGAGGCGACGGCGGACATGAACGCGCAGGTGGATGTCACTCGCGGGGA GACCACCACCTTTGGTGAGGCTTACCACTGGGGAGATAACTACCTGACCGCGGGGAATGTCCATGACCGCCATCCGGCGC CGGAGTCCGGGGCGTTTTACGCCCGGCTTCGCCATGAGCGTTATCTGAACGGCCAGACCCGGATGCAGGCCACCACCAGC TGCCCGACGCTCTGCCCGGGACAGGTGCTGAAGGTCACCGGCGGAGAGGAGGTGGCCGGGGAGTTTGCTGATGGCGTGCT CGTCACGGCGATGCACAGCCACGCCCGGCGCGATGCCGACTTTGCGGTGGAGTTTGCCGGCATACCGGACAGCCCGGACG TCGGCTACCGGCCTGAGCCCGGCGCGCGTCCGGTGATGGCCGGGACGCTGCCGGCCCGCGTGACCAGCACCCGGGAAAAC GACACCTACGGGCATATCGACAAACACGGACGCTACCGGGTGAATATGCTGTTTGACCGGGCGCGCTGGGAAACCGGGTT CGAGAGCCTGTGGGTCCGCCAGTCGCGGCCGTATGCCGGAGACACTTACGGCCTGCACCTGCCGCTGCTGGCGGGGACGG AGGTGGCGATTGGCTTTGAGGATGGTAACCCCGACCGGCCGTATATCGCGGGCGTGCTGCACGACTCGGCGCACGGCGAC CACGTCACCATTCGCAATGACAAACGTAACGTCCTGCGCACCCCGGCCAACAACAAAATCCGCCTCGACGACGAGCGCGG GAAAGAGCATATCAAGCTCTCGACGGAGTACGGCGGCAAGAGCCAGCTGAACCTCGGCCATCTCGTGGATGCTGAAAAGC AGCCGCGCGGCGAAGGCTTTGAGCTGAGAACCGACAGTTGGGGCGCTATCCGGGCACAGAAGGGTATTTTTATCAGCGCG GACGGACAGGCGCAGGCTCAGGGGCAGGTGCTGGATATGGAGCCGGCGGTCAGCAATCTGGCCGAAGCCCGGGAGCAGAT GATGTCCATCTCCGGTGACGCGCAGAAGGCGACCGCGAACCCGGCCGATCTCCAGGCGCAAATTACCCTGCTGGAGCAGC AGCTGACAGACCTCAAAAAATCGGTACTGCTGGTCAGCGCGCCGGAGGGGATAGCGCTGACCAGCGGGGAGCATTTGCAG GTCTCAGCCGGGCATAACCTGATTGCCACAGCCGGAAAGAATGCAGACGTCAGCGTGGTGAAAAATCTGTTCATCGGGGT GGGCAGTGCGCTGAGCGTGTTTGTGCGAAAGCTTGGGATCAGGCTGATAGCGAACCAGGGACCGGTACAGATGCAGGCGC AGAATGACCTGATGGCGTTGCTTGCCCGGAAGGAAATCAGCATTGTCAGCACGGAAGACAGTATCGAAATTATTGCGAAA AAACGGGTCACGATAAACGGCGGGGGAAGTTATATCACGCTCAATGCCAGTGGCATTGAATCAGCGACGGCAGGTGAGTA CAGAACAAGGGCCGGGTATTACGTCAGGCGGGAAAAAGCGCAGCATAAGCCTGACATTGCACCTTTAGCTAATGCGATAA ATGACGGCAGCCATAATATTCGCTACCTGTGTACAGATGATAATGGGGTGCCGATGATGAATACTCCTTACAGGGCCTTT CTGGCTGATGGCTCGGTATTAGAGGGTGTCAGTGATGGCGAGGGGTATACGAAGTTGTTTACTTCTGCACAGATACAGGA TGTTCTGCTGCATATGATACCGGAGGCCATCAATGCCTAA
Upstream 100 bases:
>100_bases TTGAGCCATATGGCGGCGGGGCAGAAACCGCGCCAGGTGACGCTGGGGTATCACGAAGAGGAAGGCGTCGTGATGGCGTT TGACGAGGGGACAATATCCG
Downstream 100 bases:
>100_bases ATATAATATTTATACAAAGATTGAATCGAATGTTTCAGCAGTCGACCTTTTTTACGATCTGAATGTTTACAGAACTGATG CCAGTAATAAAAAACATATA
Product: hypothetical protein
Products: NA
Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; VGR-Like Protein; VgrG Protein; Vgr Related Protein; Rhs Family Protein; Rhs Element Vgr Related Protein; Rhs-Family Protein; Replication/Virulence Associated Protein; Type VI Secretion System Rhs Element Vgr Protein; Rhs Element Vgr Family; VGR-Related Type VI Secretion System Protein; Type VI Secretion System VgrG Family Protein; Rhs Element Protein VgrE; Vgr Protein; Rhs Accessory Genetic Element
Number of amino acids: Translated: 839; Mature: 838
Protein sequence:
>839_residues MSSVKSLLFSHNHHLLSVKGCEAGLDVLAFEGDEALSQPFRYRIEFTSADHAISKEMMLMKAASLTLQAPVAQGFGINVQ QPVRVIQGVVTGFERLSTSRDETHYALTLQPRLALLNRSHQNAIYQDQSVPQIVEKILRERHGLRGQDFLFSLTKTYPRR EQVMQYGEDDLRFITRLLGEVGIWFRFTADKRLHIDVAEFCDSQQGYEKGLTLPSVPPSGQQSAGVDAVWEMACRHRVVE QQVSTRDYNYREATADMNAQVDVTRGETTTFGEAYHWGDNYLTAGNVHDRHPAPESGAFYARLRHERYLNGQTRMQATTS CPTLCPGQVLKVTGGEEVAGEFADGVLVTAMHSHARRDADFAVEFAGIPDSPDVGYRPEPGARPVMAGTLPARVTSTREN DTYGHIDKHGRYRVNMLFDRARWETGFESLWVRQSRPYAGDTYGLHLPLLAGTEVAIGFEDGNPDRPYIAGVLHDSAHGD HVTIRNDKRNVLRTPANNKIRLDDERGKEHIKLSTEYGGKSQLNLGHLVDAEKQPRGEGFELRTDSWGAIRAQKGIFISA DGQAQAQGQVLDMEPAVSNLAEAREQMMSISGDAQKATANPADLQAQITLLEQQLTDLKKSVLLVSAPEGIALTSGEHLQ VSAGHNLIATAGKNADVSVVKNLFIGVGSALSVFVRKLGIRLIANQGPVQMQAQNDLMALLARKEISIVSTEDSIEIIAK KRVTINGGGSYITLNASGIESATAGEYRTRAGYYVRREKAQHKPDIAPLANAINDGSHNIRYLCTDDNGVPMMNTPYRAF LADGSVLEGVSDGEGYTKLFTSAQIQDVLLHMIPEAINA
Sequences:
>Translated_839_residues MSSVKSLLFSHNHHLLSVKGCEAGLDVLAFEGDEALSQPFRYRIEFTSADHAISKEMMLMKAASLTLQAPVAQGFGINVQ QPVRVIQGVVTGFERLSTSRDETHYALTLQPRLALLNRSHQNAIYQDQSVPQIVEKILRERHGLRGQDFLFSLTKTYPRR EQVMQYGEDDLRFITRLLGEVGIWFRFTADKRLHIDVAEFCDSQQGYEKGLTLPSVPPSGQQSAGVDAVWEMACRHRVVE QQVSTRDYNYREATADMNAQVDVTRGETTTFGEAYHWGDNYLTAGNVHDRHPAPESGAFYARLRHERYLNGQTRMQATTS CPTLCPGQVLKVTGGEEVAGEFADGVLVTAMHSHARRDADFAVEFAGIPDSPDVGYRPEPGARPVMAGTLPARVTSTREN DTYGHIDKHGRYRVNMLFDRARWETGFESLWVRQSRPYAGDTYGLHLPLLAGTEVAIGFEDGNPDRPYIAGVLHDSAHGD HVTIRNDKRNVLRTPANNKIRLDDERGKEHIKLSTEYGGKSQLNLGHLVDAEKQPRGEGFELRTDSWGAIRAQKGIFISA DGQAQAQGQVLDMEPAVSNLAEAREQMMSISGDAQKATANPADLQAQITLLEQQLTDLKKSVLLVSAPEGIALTSGEHLQ VSAGHNLIATAGKNADVSVVKNLFIGVGSALSVFVRKLGIRLIANQGPVQMQAQNDLMALLARKEISIVSTEDSIEIIAK KRVTINGGGSYITLNASGIESATAGEYRTRAGYYVRREKAQHKPDIAPLANAINDGSHNIRYLCTDDNGVPMMNTPYRAF LADGSVLEGVSDGEGYTKLFTSAQIQDVLLHMIPEAINA >Mature_838_residues SSVKSLLFSHNHHLLSVKGCEAGLDVLAFEGDEALSQPFRYRIEFTSADHAISKEMMLMKAASLTLQAPVAQGFGINVQQ PVRVIQGVVTGFERLSTSRDETHYALTLQPRLALLNRSHQNAIYQDQSVPQIVEKILRERHGLRGQDFLFSLTKTYPRRE QVMQYGEDDLRFITRLLGEVGIWFRFTADKRLHIDVAEFCDSQQGYEKGLTLPSVPPSGQQSAGVDAVWEMACRHRVVEQ QVSTRDYNYREATADMNAQVDVTRGETTTFGEAYHWGDNYLTAGNVHDRHPAPESGAFYARLRHERYLNGQTRMQATTSC PTLCPGQVLKVTGGEEVAGEFADGVLVTAMHSHARRDADFAVEFAGIPDSPDVGYRPEPGARPVMAGTLPARVTSTREND TYGHIDKHGRYRVNMLFDRARWETGFESLWVRQSRPYAGDTYGLHLPLLAGTEVAIGFEDGNPDRPYIAGVLHDSAHGDH VTIRNDKRNVLRTPANNKIRLDDERGKEHIKLSTEYGGKSQLNLGHLVDAEKQPRGEGFELRTDSWGAIRAQKGIFISAD GQAQAQGQVLDMEPAVSNLAEAREQMMSISGDAQKATANPADLQAQITLLEQQLTDLKKSVLLVSAPEGIALTSGEHLQV SAGHNLIATAGKNADVSVVKNLFIGVGSALSVFVRKLGIRLIANQGPVQMQAQNDLMALLARKEISIVSTEDSIEIIAKK RVTINGGGSYITLNASGIESATAGEYRTRAGYYVRREKAQHKPDIAPLANAINDGSHNIRYLCTDDNGVPMMNTPYRAFL ADGSVLEGVSDGEGYTKLFTSAQIQDVLLHMIPEAINA
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92343; Mature: 92212
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVKSLLFSHNHHLLSVKGCEAGLDVLAFEGDEALSQPFRYRIEFTSADHAISKEMMLM CCHHHHHHHCCCCCEEEEECCCCCCEEEEECCCHHHCCCEEEEEEECCCCHHHHHHHHHH KAASLTLQAPVAQGFGINVQQPVRVIQGVVTGFERLSTSRDETHYALTLQPRLALLNRSH HHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHCCCC QNAIYQDQSVPQIVEKILRERHGLRGQDFLFSLTKTYPRREQVMQYGEDDLRFITRLLGE CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHH VGIWFRFTADKRLHIDVAEFCDSQQGYEKGLTLPSVPPSGQQSAGVDAVWEMACRHRVVE CCEEEEEECCCEEEEEHHHHCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH QQVSTRDYNYREATADMNAQVDVTRGETTTFGEAYHWGDNYLTAGNVHDRHPAPESGAFY HHHHHCCCCCCHHCCCCCCEEEEECCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCH ARLRHERYLNGQTRMQATTSCPTLCPGQVLKVTGGEEVAGEFADGVLVTAMHSHARRDAD HHHHHHHHCCCCHHEEECCCCCCCCCCCEEEECCCHHHHHHHHCCEEEEHHHHHHCCCCC FAVEFAGIPDSPDVGYRPEPGARPVMAGTLPARVTSTRENDTYGHIDKHGRYRVNMLFDR EEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCEEEEEEEEH ARWETGFESLWVRQSRPYAGDTYGLHLPLLAGTEVAIGFEDGNPDRPYIAGVLHDSAHGD HHHHCCHHHHEEECCCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCEEEEEEECCCCCC HVTIRNDKRNVLRTPANNKIRLDDERGKEHIKLSTEYGGKSQLNLGHLVDAEKQPRGEGF EEEEECCCCCEEECCCCCCEEECCCCCCCEEEEEECCCCCCCCCCHHCCCCCCCCCCCCE ELRTDSWGAIRAQKGIFISADGQAQAQGQVLDMEPAVSNLAEAREQMMSISGDAQKATAN EEECCCCCEEEECCCEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCHHCCCC PADLQAQITLLEQQLTDLKKSVLLVSAPEGIALTSGEHLQVSAGHNLIATAGKNADVSVV CCHHHHHHHHHHHHHHHHHHCEEEEECCCCEEEECCCEEEEECCCCEEEECCCCCCHHHH KNLFIGVGSALSVFVRKLGIRLIANQGPVQMQAQNDLMALLARKEISIVSTEDSIEIIAK HHHHHCCCHHHHHHHHHHCEEEEECCCCEEEECHHHHHHHHHHCCEEEEECCCCEEEEEE KRVTINGGGSYITLNASGIESATAGEYRTRAGYYVRREKAQHKPDIAPLANAINDGSHNI EEEEEECCCCEEEEECCCCCCCCCCCHHHCCCCEEEHHHHCCCCCHHHHHHHHCCCCCCE RYLCTDDNGVPMMNTPYRAFLADGSVLEGVSDGEGYTKLFTSAQIQDVLLHMIPEAINA EEEEECCCCCCCCCCCCCEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSVKSLLFSHNHHLLSVKGCEAGLDVLAFEGDEALSQPFRYRIEFTSADHAISKEMMLM CHHHHHHHCCCCCEEEEECCCCCCEEEEECCCHHHCCCEEEEEEECCCCHHHHHHHHHH KAASLTLQAPVAQGFGINVQQPVRVIQGVVTGFERLSTSRDETHYALTLQPRLALLNRSH HHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHCCCC QNAIYQDQSVPQIVEKILRERHGLRGQDFLFSLTKTYPRREQVMQYGEDDLRFITRLLGE CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHH VGIWFRFTADKRLHIDVAEFCDSQQGYEKGLTLPSVPPSGQQSAGVDAVWEMACRHRVVE CCEEEEEECCCEEEEEHHHHCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH QQVSTRDYNYREATADMNAQVDVTRGETTTFGEAYHWGDNYLTAGNVHDRHPAPESGAFY HHHHHCCCCCCHHCCCCCCEEEEECCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCH ARLRHERYLNGQTRMQATTSCPTLCPGQVLKVTGGEEVAGEFADGVLVTAMHSHARRDAD HHHHHHHHCCCCHHEEECCCCCCCCCCCEEEECCCHHHHHHHHCCEEEEHHHHHHCCCCC FAVEFAGIPDSPDVGYRPEPGARPVMAGTLPARVTSTRENDTYGHIDKHGRYRVNMLFDR EEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCEEEEEEEEH ARWETGFESLWVRQSRPYAGDTYGLHLPLLAGTEVAIGFEDGNPDRPYIAGVLHDSAHGD HHHHCCHHHHEEECCCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCEEEEEEECCCCCC HVTIRNDKRNVLRTPANNKIRLDDERGKEHIKLSTEYGGKSQLNLGHLVDAEKQPRGEGF EEEEECCCCCEEECCCCCCEEECCCCCCCEEEEEECCCCCCCCCCHHCCCCCCCCCCCCE ELRTDSWGAIRAQKGIFISADGQAQAQGQVLDMEPAVSNLAEAREQMMSISGDAQKATAN EEECCCCCEEEECCCEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCHHCCCC PADLQAQITLLEQQLTDLKKSVLLVSAPEGIALTSGEHLQVSAGHNLIATAGKNADVSVV CCHHHHHHHHHHHHHHHHHHCEEEEECCCCEEEECCCEEEEECCCCEEEECCCCCCHHHH KNLFIGVGSALSVFVRKLGIRLIANQGPVQMQAQNDLMALLARKEISIVSTEDSIEIIAK HHHHHCCCHHHHHHHHHHCEEEEECCCCEEEECHHHHHHHHHHCCEEEEECCCCEEEEEE KRVTINGGGSYITLNASGIESATAGEYRTRAGYYVRREKAQHKPDIAPLANAINDGSHNI EEEEEECCCCEEEEECCCCCCCCCCCHHHCCCCEEEHHHHCCCCCHHHHHHHHCCCCCCE RYLCTDDNGVPMMNTPYRAFLADGSVLEGVSDGEGYTKLFTSAQIQDVLLHMIPEAINA EEEEECCCCCCCCCCCCCEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA