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The map label for this gene is clpV1 [H]

Identifier: 152969881

GI number: 152969881

Start: 1490213

End: 1492813

Strand: Direct

Name: clpV1 [H]

Synonym: KPN_01328

Alternate gene names: 152969881

Gene position: 1490213-1492813 (Clockwise)

Preceding gene: 152969880

Following gene: 152969882

Centisome position: 28.04

GC content: 64.24

Gene sequence:

>2601_bases
ATGGAGGGGGCGGCCTCCCTGTGCCAGACCCGGGCGCATGCCGAGATCCTGCCCGAGCACTGGCTGCTCAAGCTGCTGGA
ACAGGGGGAAGGCGATCTGACGGTGCTGGCGCGGCGCTATGAATGGGATATGGATGCTCTGTGGCAGGATCTGCTGAGCT
GGCTGGATAAACAGCCGCGCTCGGTACGTCATCGTCCCCAGCTCTCTGACCATACCCTGAGGCTGATGCAGGAGGCCTGG
CTGATTGCCTCTCTCAGCGGCGAAGCGCAGATCCGCAGTGTTCACCTGCTGATGGCGCTGGTTGAAAAACAGAATCTGAT
CCAGTGCGATGGCCTGTGGCCGCTGTTAACGCTGGGCCAGCGTCAGCTGGAACGCCTGCGCTCCTTGCTGGATGCCCAGT
CCGACGAACGTCCGCCAGCGCAGCAGGAAGCGGCGCTGGCGCAGCCCCATGGCGGGGACGTGGAATTTGTGGGGCGTCCT
GCGGGCAGCGAACTGAATGCGGATGGGCTCAACCCGGCGCTGCAGAACGCGCTGGACAAATTCACTCTCGACGTCACCGC
CAAAGCCAGAGACGGCCAGATTGACCCGGTGTTCGGACGCGACACGGAAATCCGCCAGATGGTGGATATTCTCTCCCGTC
GGCGAAAAAACAACCCAATCCTCGTCGGTGAGCCGGGCGTGGGCAAGACCGCTCTGGTGGAAGGCCTGGCGCTGCGCATT
GCCGAAGGCAACGTCCCCGACGCGCTGAAGCCAGTGTCGGTGCGCACCCTTGACCTCGGTCTGCTGCAGGCCGGCGCCGG
GGTCAAAGGCGAGTTCGAGCAGCGGCTGAAAAATATCATTGAGGCGGTACAGCAGTCGCCTTCGCCGGTGCTACTGTTTA
TCGACGAGGCGCACACGATCATCGGCGCGGGTAATCAGGCGGGCGGCGCGGATGCCGCCAACCTGCTGAAGCCGGCGCTG
GCCCGGGGCGAACTGCGGACTATCGCCGCCACCACCTGGAGTGAATACAAGCAGTACTTCGAGCGCGACGCCGCGCTGGA
GCGCCGCTTTCAGATGGTCAAGGTGGATGAGCCGGACGACGACACCGCCTGCCTGATGCTGCGCGGCCTGAAGTCCCGCT
ATGCCGACCACCACGGCGTGCATATCACGGATGATGCGGTGCGCGCCGCCGTGACGCTGTCACGACGCTATCTCACCGGT
CGCCAGCTGCCGGACAAGGCAGTGGATTTACTCGACACCGCTTCCGCCCGCCTGCGTATGAGTTTGGATACCGTGCCTGA
GCCGCTGACCCGCATGAAGGCGCAGCTCACCGCGCTGGCAATGGAGAAGCAGGCGCTGCTGGAAGATATTGCGCTGGGCA
ACAGCGCCCGCGGCGATCGGCTGGCGGCCATTGAGCAGGAGGAGATCCGCCTTATTCTGGCGCTGGATACCCTTGAAACT
CAGTATGGTCAGGAGCTGCAGCTGACGGAAGCGCTGCTCGCCTGTCGCCGCGATATCTCCCGCCAGGCGGAAATTAGCGA
TCTACAAACCGCGCTTATCGCCGTCCAGCAGGGCAATCCGCTGCTCGGGCTGGACGTCGACGTCCGCACCGTGGCGACGG
TGATTGCCGACTGGACCGGCGTGCCGCTCTCCTCGCTAATGAAAGATGAGCAGACGGAGCTGCTGAGTCTGGAAGAGAGT
CTCGGCAAACGGGTGGTTGGCCAGGAGGCGGCCCTGAGCGCTATTGCCCGGCGCCTGCGCGCCGCGAAAACCGGCCTGAC
GCCGGAGAACGGTCCGCAAGGGGTGTTCCTGCTGGTCGGGCCGAGCGGCACCGGCAAAACGGAAACGGCGCTCGCCCTGG
CCGATGCGCTGTTCGGCGGCGAGAAAGCGCTGATCACCATCAATCTCTCCGAGTACCAGGAGCCGCACACCGTCAGCCAG
CTGAAGGGTTCTCCGCCCGGCTACGTCGGCTACGGCCAGGGCGGGATCCTGACCGAGGCGGTGCGCAAACGCCCCTACAG
CGTGGTGCTGCTCGATGAGGTGGAAAAGGCCCATCGCGATGTGATGAACCTGTTCTACCAGGTCTTCGACCGGGGGGGAA
TGCGCGACGGCGAGGGGCGTGAAATCGACTTTCGCAACACCGTGATCCTGATGACCGCCAACCTCGGAAGCGACCTCCTG
ATGCAGTTGCTGGATGAACAGCCGGAGGCCAGCGAATCAGACCTGCACGAGCTGCTGCGCCCGGTACTGCGCGGCCACTT
CCAGCCGGCGCTGCTGGCCCGCTTCCAGACGGTGATTTACCGTCCGCTGCCGGCGGCAGCGCTGCGCGCCATTGTCGGCA
TGAAGCTCGGGCAGGTAAGTCAGCGTCTGGCTTGCCATTACGGAATCACCACCACCCTCAGCGAGAGCCTGTTCGACGCG
CTGACCGAGGCCTGCCTGCTGCCGGATACCGGCGCCCGTAACGTCGACAGTCTGCTCAATCAGCAGATCCTGCCGGCACT
GAGTCAGCAGCTATTGAGCCATATGGCGGCGGGGCAGAAACCGCGCCAGGTGACGCTGGGGTATCACGAAGAGGAAGGCG
TCGTGATGGCGTTTGACGAGGGGACAATATCCGATGAGTAG

Upstream 100 bases:

>100_bases
ACAGCGACGGGCGGTAGCGTGTCCGGAAACAATAAGAGAGGATCTCATGGAAAATCCAGCCAGCCTGTTACGCCGTCTTA
ATCCCTGCTGTGCCCGCGCA

Downstream 100 bases:

>100_bases
CGTTAAATCGTTGTTGTTCAGCCATAACCACCACCTGCTTTCGGTGAAGGGATGTGAAGCCGGGCTTGATGTGCTGGCCT
TCGAGGGCGATGAAGCCCTG

Product: putative protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 866; Mature: 866

Protein sequence:

>866_residues
MEGAASLCQTRAHAEILPEHWLLKLLEQGEGDLTVLARRYEWDMDALWQDLLSWLDKQPRSVRHRPQLSDHTLRLMQEAW
LIASLSGEAQIRSVHLLMALVEKQNLIQCDGLWPLLTLGQRQLERLRSLLDAQSDERPPAQQEAALAQPHGGDVEFVGRP
AGSELNADGLNPALQNALDKFTLDVTAKARDGQIDPVFGRDTEIRQMVDILSRRRKNNPILVGEPGVGKTALVEGLALRI
AEGNVPDALKPVSVRTLDLGLLQAGAGVKGEFEQRLKNIIEAVQQSPSPVLLFIDEAHTIIGAGNQAGGADAANLLKPAL
ARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRGLKSRYADHHGVHITDDAVRAAVTLSRRYLTG
RQLPDKAVDLLDTASARLRMSLDTVPEPLTRMKAQLTALAMEKQALLEDIALGNSARGDRLAAIEQEEIRLILALDTLET
QYGQELQLTEALLACRRDISRQAEISDLQTALIAVQQGNPLLGLDVDVRTVATVIADWTGVPLSSLMKDEQTELLSLEES
LGKRVVGQEAALSAIARRLRAAKTGLTPENGPQGVFLLVGPSGTGKTETALALADALFGGEKALITINLSEYQEPHTVSQ
LKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGGMRDGEGREIDFRNTVILMTANLGSDLL
MQLLDEQPEASESDLHELLRPVLRGHFQPALLARFQTVIYRPLPAAALRAIVGMKLGQVSQRLACHYGITTTLSESLFDA
LTEACLLPDTGARNVDSLLNQQILPALSQQLLSHMAAGQKPRQVTLGYHEEEGVVMAFDEGTISDE

Sequences:

>Translated_866_residues
MEGAASLCQTRAHAEILPEHWLLKLLEQGEGDLTVLARRYEWDMDALWQDLLSWLDKQPRSVRHRPQLSDHTLRLMQEAW
LIASLSGEAQIRSVHLLMALVEKQNLIQCDGLWPLLTLGQRQLERLRSLLDAQSDERPPAQQEAALAQPHGGDVEFVGRP
AGSELNADGLNPALQNALDKFTLDVTAKARDGQIDPVFGRDTEIRQMVDILSRRRKNNPILVGEPGVGKTALVEGLALRI
AEGNVPDALKPVSVRTLDLGLLQAGAGVKGEFEQRLKNIIEAVQQSPSPVLLFIDEAHTIIGAGNQAGGADAANLLKPAL
ARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRGLKSRYADHHGVHITDDAVRAAVTLSRRYLTG
RQLPDKAVDLLDTASARLRMSLDTVPEPLTRMKAQLTALAMEKQALLEDIALGNSARGDRLAAIEQEEIRLILALDTLET
QYGQELQLTEALLACRRDISRQAEISDLQTALIAVQQGNPLLGLDVDVRTVATVIADWTGVPLSSLMKDEQTELLSLEES
LGKRVVGQEAALSAIARRLRAAKTGLTPENGPQGVFLLVGPSGTGKTETALALADALFGGEKALITINLSEYQEPHTVSQ
LKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGGMRDGEGREIDFRNTVILMTANLGSDLL
MQLLDEQPEASESDLHELLRPVLRGHFQPALLARFQTVIYRPLPAAALRAIVGMKLGQVSQRLACHYGITTTLSESLFDA
LTEACLLPDTGARNVDSLLNQQILPALSQQLLSHMAAGQKPRQVTLGYHEEEGVVMAFDEGTISDE
>Mature_866_residues
MEGAASLCQTRAHAEILPEHWLLKLLEQGEGDLTVLARRYEWDMDALWQDLLSWLDKQPRSVRHRPQLSDHTLRLMQEAW
LIASLSGEAQIRSVHLLMALVEKQNLIQCDGLWPLLTLGQRQLERLRSLLDAQSDERPPAQQEAALAQPHGGDVEFVGRP
AGSELNADGLNPALQNALDKFTLDVTAKARDGQIDPVFGRDTEIRQMVDILSRRRKNNPILVGEPGVGKTALVEGLALRI
AEGNVPDALKPVSVRTLDLGLLQAGAGVKGEFEQRLKNIIEAVQQSPSPVLLFIDEAHTIIGAGNQAGGADAANLLKPAL
ARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRGLKSRYADHHGVHITDDAVRAAVTLSRRYLTG
RQLPDKAVDLLDTASARLRMSLDTVPEPLTRMKAQLTALAMEKQALLEDIALGNSARGDRLAAIEQEEIRLILALDTLET
QYGQELQLTEALLACRRDISRQAEISDLQTALIAVQQGNPLLGLDVDVRTVATVIADWTGVPLSSLMKDEQTELLSLEES
LGKRVVGQEAALSAIARRLRAAKTGLTPENGPQGVFLLVGPSGTGKTETALALADALFGGEKALITINLSEYQEPHTVSQ
LKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGGMRDGEGREIDFRNTVILMTANLGSDLL
MQLLDEQPEASESDLHELLRPVLRGHFQPALLARFQTVIYRPLPAAALRAIVGMKLGQVSQRLACHYGITTTLSESLFDA
LTEACLLPDTGARNVDSLLNQQILPALSQQLLSHMAAGQKPRQVTLGYHEEEGVVMAFDEGTISDE

Specific function: Required for secretion of hcp1 probably by providing the energy source for its translocation [H]

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the clpA/clpB family [H]

Homologues:

Organism=Homo sapiens, GI13540606, Length=301, Percent_Identity=31.8936877076412, Blast_Score=157, Evalue=3e-38,
Organism=Escherichia coli, GI1788943, Length=696, Percent_Identity=44.8275862068966, Blast_Score=560, Evalue=1e-160,
Organism=Escherichia coli, GI1787109, Length=418, Percent_Identity=37.0813397129187, Blast_Score=251, Evalue=1e-67,
Organism=Saccharomyces cerevisiae, GI6320464, Length=690, Percent_Identity=41.0144927536232, Blast_Score=472, Evalue=1e-134,
Organism=Saccharomyces cerevisiae, GI6323002, Length=896, Percent_Identity=33.8169642857143, Blast_Score=448, Evalue=1e-126,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR003959
- InterPro:   IPR017729
- InterPro:   IPR018368
- InterPro:   IPR001270
- InterPro:   IPR019489
- InterPro:   IPR023150 [H]

Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF10431 ClpB_D2-small [H]

EC number: NA

Molecular weight: Translated: 94927; Mature: 94927

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS00870 CLPAB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGAASLCQTRAHAEILPEHWLLKLLEQGEGDLTVLARRYEWDMDALWQDLLSWLDKQPR
CCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEHHHCCCHHHHHHHHHHHHCCCCH
SVRHRPQLSDHTLRLMQEAWLIASLSGEAQIRSVHLLMALVEKQNLIQCDGLWPLLTLGQ
HHCCCCCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHH
RQLERLRSLLDAQSDERPPAQQEAALAQPHGGDVEFVGRPAGSELNADGLNPALQNALDK
HHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH
FTLDVTAKARDGQIDPVFGRDTEIRQMVDILSRRRKNNPILVGEPGVGKTALVEGLALRI
EEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHEEE
AEGNVPDALKPVSVRTLDLGLLQAGAGVKGEFEQRLKNIIEAVQQSPSPVLLFIDEAHTI
ECCCCCCCCCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCEE
IGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDD
EECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
DTACLMLRGLKSRYADHHGVHITDDAVRAAVTLSRRYLTGRQLPDKAVDLLDTASARLRM
CHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHEEE
SLDTVPEPLTRMKAQLTALAMEKQALLEDIALGNSARGDRLAAIEQEEIRLILALDTLET
EHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHEEEEEEEEHHHH
QYGQELQLTEALLACRRDISRQAEISDLQTALIAVQQGNPLLGLDVDVRTVATVIADWTG
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEECCCHHHHHHHHHHCCCC
VPLSSLMKDEQTELLSLEESLGKRVVGQEAALSAIARRLRAAKTGLTPENGPQGVFLLVG
CCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC
PSGTGKTETALALADALFGGEKALITINLSEYQEPHTVSQLKGSPPGYVGYGQGGILTEA
CCCCCCHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCHHHHHCCCCCCEEECCCCCHHHHH
VRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGGMRDGEGREIDFRNTVILMTANLGSDLL
HHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEEEECCCHHHH
MQLLDEQPEASESDLHELLRPVLRGHFQPALLARFQTVIYRPLPAAALRAIVGMKLGQVS
HHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QRLACHYGITTTLSESLFDALTEACLLPDTGARNVDSLLNQQILPALSQQLLSHMAAGQK
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PRQVTLGYHEEEGVVMAFDEGTISDE
CCEEECCEECCCCEEEEECCCCCCCC
>Mature Secondary Structure
MEGAASLCQTRAHAEILPEHWLLKLLEQGEGDLTVLARRYEWDMDALWQDLLSWLDKQPR
CCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEHHHCCCHHHHHHHHHHHHCCCCH
SVRHRPQLSDHTLRLMQEAWLIASLSGEAQIRSVHLLMALVEKQNLIQCDGLWPLLTLGQ
HHCCCCCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHH
RQLERLRSLLDAQSDERPPAQQEAALAQPHGGDVEFVGRPAGSELNADGLNPALQNALDK
HHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH
FTLDVTAKARDGQIDPVFGRDTEIRQMVDILSRRRKNNPILVGEPGVGKTALVEGLALRI
EEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHEEE
AEGNVPDALKPVSVRTLDLGLLQAGAGVKGEFEQRLKNIIEAVQQSPSPVLLFIDEAHTI
ECCCCCCCCCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCEE
IGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDD
EECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
DTACLMLRGLKSRYADHHGVHITDDAVRAAVTLSRRYLTGRQLPDKAVDLLDTASARLRM
CHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHEEE
SLDTVPEPLTRMKAQLTALAMEKQALLEDIALGNSARGDRLAAIEQEEIRLILALDTLET
EHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHEEEEEEEEHHHH
QYGQELQLTEALLACRRDISRQAEISDLQTALIAVQQGNPLLGLDVDVRTVATVIADWTG
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEECCCHHHHHHHHHHCCCC
VPLSSLMKDEQTELLSLEESLGKRVVGQEAALSAIARRLRAAKTGLTPENGPQGVFLLVG
CCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC
PSGTGKTETALALADALFGGEKALITINLSEYQEPHTVSQLKGSPPGYVGYGQGGILTEA
CCCCCCHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCHHHHHCCCCCCEEECCCCCHHHHH
VRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGGMRDGEGREIDFRNTVILMTANLGSDLL
HHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEEEECCCHHHH
MQLLDEQPEASESDLHELLRPVLRGHFQPALLARFQTVIYRPLPAAALRAIVGMKLGQVS
HHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QRLACHYGITTTLSESLFDALTEACLLPDTGARNVDSLLNQQILPALSQQLLSHMAAGQK
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PRQVTLGYHEEEGVVMAFDEGTISDE
CCEEECCEECCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]