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The map label for this gene is yeaM [H]

Identifier: 152969731

GI number: 152969731

Start: 1327043

End: 1327837

Strand: Direct

Name: yeaM [H]

Synonym: KPN_01177

Alternate gene names: 152969731

Gene position: 1327043-1327837 (Clockwise)

Preceding gene: 152969727

Following gene: 152969734

Centisome position: 24.97

GC content: 64.03

Gene sequence:

>795_bases
ATGATGATTGGACTGGGGCTGGATGGCTATGAACCGGACAGTGGCCACGAATCGGCCATTGCCTTTCGTATCCGGGTGGT
GGAGGCGGAGCAGTATATTCCGGCGCATTCCCACCGTAAGGGGCAGCTGATCCTTGCCCTGCACGGCGCCTTGACCTGCG
AGGTGGAGAACGCAATGTGGATGGTGCCGCCGCAGTATGCGGTGTGGGTTCCGGGGCAGCTGTCCCACAGTAACCGCGCT
ACCCCCGGCGCCCAGGTATGCTTCCTGTTCATCGAGCCGGGCGCCGCGCCGATGCCGGATCGCTGCTGTACGCTAAAGAT
TTCCCCGCTGGTGCGAGAGCTGATCCTTACTCTGGCGGAGCGCGGCGGAGAGTCCCTGGCCGCCCCCGCCACGGCCCGGC
TGGTGCAGGTTCTGTTTGATGAGCTGCCCCGCCAGCCGCAGGAGCACCTGCAGCTGCCGGTATCAAACCACCCGAAAATT
CGTCAAATGGTGACGATGATGGCCGAGGATCCGGCGCGCTGGCAGACCCTGAGCCAGTGGGCGGCGGTGTTTGCGATGAG
CGAGCGGAATCTGGCCCGCCTGGTAGTGCGCGAAACGGGGCTGAGCTTTCGCCGCTGGCGCCATCAGCTGCAGCTGATCC
TCGCGCTGCAGCTGCTGATCCGCGGGCAGACGGTGCAGCAGACGGCTCAGGCGCTGGGCTACGATTCCACCACCGCCTTC
ATCACCATGTTTAAAAAAGGGCTCGGGCAGACACCGGGCCGCTATCACGGTAGCCTGGCTACGACTTCCCAATAA

Upstream 100 bases:

>100_bases
ATATCATTCTCAAGGTAACTAACGAGGGGGGTTACGATAGCGGCTTTGTCCCTCGTTTAAATCAAGCTAAAATGACAGAT
TATCGCTAATATCGGACAAT

Downstream 100 bases:

>100_bases
ACAATGAGATGATCCCGGCGGCAATCAGCGGCCCGACCGGGACGCCGCGAAACAGGGCGACGCCGAGTACTGTACCGACC
AGCAGCCCGGCCACCAGATG

Product: putative ARAC-type regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MMIGLGLDGYEPDSGHESAIAFRIRVVEAEQYIPAHSHRKGQLILALHGALTCEVENAMWMVPPQYAVWVPGQLSHSNRA
TPGAQVCFLFIEPGAAPMPDRCCTLKISPLVRELILTLAERGGESLAAPATARLVQVLFDELPRQPQEHLQLPVSNHPKI
RQMVTMMAEDPARWQTLSQWAAVFAMSERNLARLVVRETGLSFRRWRHQLQLILALQLLIRGQTVQQTAQALGYDSTTAF
ITMFKKGLGQTPGRYHGSLATTSQ

Sequences:

>Translated_264_residues
MMIGLGLDGYEPDSGHESAIAFRIRVVEAEQYIPAHSHRKGQLILALHGALTCEVENAMWMVPPQYAVWVPGQLSHSNRA
TPGAQVCFLFIEPGAAPMPDRCCTLKISPLVRELILTLAERGGESLAAPATARLVQVLFDELPRQPQEHLQLPVSNHPKI
RQMVTMMAEDPARWQTLSQWAAVFAMSERNLARLVVRETGLSFRRWRHQLQLILALQLLIRGQTVQQTAQALGYDSTTAF
ITMFKKGLGQTPGRYHGSLATTSQ
>Mature_264_residues
MMIGLGLDGYEPDSGHESAIAFRIRVVEAEQYIPAHSHRKGQLILALHGALTCEVENAMWMVPPQYAVWVPGQLSHSNRA
TPGAQVCFLFIEPGAAPMPDRCCTLKISPLVRELILTLAERGGESLAAPATARLVQVLFDELPRQPQEHLQLPVSNHPKI
RQMVTMMAEDPARWQTLSQWAAVFAMSERNLARLVVRETGLSFRRWRHQLQLILALQLLIRGQTVQQTAQALGYDSTTAF
ITMFKKGLGQTPGRYHGSLATTSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788091, Length=263, Percent_Identity=68.8212927756654, Blast_Score=354, Evalue=4e-99,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR003313
- InterPro:   IPR018062
- InterPro:   IPR018060
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02311 AraC_binding [H]

EC number: NA

Molecular weight: Translated: 29354; Mature: 29354

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIGLGLDGYEPDSGHESAIAFRIRVVEAEQYIPAHSHRKGQLILALHGALTCEVENAMW
CEEECCCCCCCCCCCCCCEEEEEEEEEEHHHHCCCCCCCCCCEEEEEECEEEEEECCCEE
MVPPQYAVWVPGQLSHSNRATPGAQVCFLFIEPGAAPMPDRCCTLKISPLVRELILTLAE
EECCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHH
RGGESLAAPATARLVQVLFDELPRQPQEHLQLPVSNHPKIRQMVTMMAEDPARWQTLSQW
CCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
AAVFAMSERNLARLVVRETGLSFRRWRHQLQLILALQLLIRGQTVQQTAQALGYDSTTAF
HHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHH
ITMFKKGLGQTPGRYHGSLATTSQ
HHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMIGLGLDGYEPDSGHESAIAFRIRVVEAEQYIPAHSHRKGQLILALHGALTCEVENAMW
CEEECCCCCCCCCCCCCCEEEEEEEEEEHHHHCCCCCCCCCCEEEEEECEEEEEECCCEE
MVPPQYAVWVPGQLSHSNRATPGAQVCFLFIEPGAAPMPDRCCTLKISPLVRELILTLAE
EECCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHH
RGGESLAAPATARLVQVLFDELPRQPQEHLQLPVSNHPKIRQMVTMMAEDPARWQTLSQW
CCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
AAVFAMSERNLARLVVRETGLSFRRWRHQLQLILALQLLIRGQTVQQTAQALGYDSTTAF
HHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHH
ITMFKKGLGQTPGRYHGSLATTSQ
HHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]