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The map label for this gene is ybfM [H]

Identifier: 152969267

GI number: 152969267

Start: 790293

End: 791696

Strand: Direct

Name: ybfM [H]

Synonym: KPN_00703

Alternate gene names: 152969267

Gene position: 790293-791696 (Clockwise)

Preceding gene: 152969265

Following gene: 152969268

Centisome position: 14.87

GC content: 54.91

Gene sequence:

>1404_bases
ATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATTGCCGCCGTCACCGCGATGTCGGGCTGGGTTGTGGC
TCCACAGGCCAGCGCAGCAGGCTTTATCGATGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAGCGTGACC
GTAAAGATGTGACCGACGGCGACAAATACAAAACCAACCTTTCCCACTCCACCTGGAACGCCAACCTGGACTTCCAGTCC
GGCTATGCCGCCGATATGTTTGGCCTTGATATTGCCGCGTTTACCGCGATTGAAATGGCGGAGAACGGCGATAGCGGTCA
CCCGAACGAAATTGCTTTCTCGTCACGTAACAAAGCCTATGACGAAGACTATTCCGGCGATAAGAGCGGCATCAGCCTGT
ATAAAGCCGCAGCGAAATTCAAATATGGTCCGGCGTGGGCACGTGCGGGCTATATCCAGCCAACCGGCCAGACTCTGCTG
GCCCCGCACTGGAGTTTTATGCCAGGTACCTATCAGGGGGCGGAGGCCGGGGCTAACTTCGACTATGGCACGGCGGGCGC
GTTAAGTTTCTCCTATATGTGGACGAACGAGTATAAAGCGCCATGGCATATCGAGATGGACGATTTCTATCAGAACGATA
AGAAGACCAAAGTCGATTACCTCCACTCCGTCGGCGCTAAATATGATTTCAAAAATGACCTGGTGCTGGAGGCGGCATTT
GGTCAGGCTCAGGGCTATATCGATCAGTACTTTGCTAAAGCCAGCTACAAGTTTGATGTCGCCGGCGCGCCGCTGAGCAC
CAGCTACCAGTTCTACGGCACCCGCGATAAGGTCAGCAACGGCGGGGTCAACGACATCTATGATGGCACCGCATGGCTGC
AGGCGTTAACCTTTGGTTATAAGGTGGCGGATGTCCTGGATCTGCGTCTCGAGGGAACCTGGGTGAAGGCTGATGGCCAG
CAGGGCTACTTCCTGCAGCGTATGACCCCGACCTACGCCTCTTCCAATGGTCGTCTCGATATCTGGTGGGATAACCGCTC
CGACTTTAACGCCAACGGCGAAAAAGCGGTCTTCTTTGGCGCGATGTATGACATGAAAAACTGGGATATGCCGGGCTGGG
CGTTCGGCGCGTCTTATGTCTACGCCTGGGATGCGAAGCCGGGCAGAATGTCCTCTCCGGATGCGTACTATGACCCTGAC
TATCGCCTGAAAGAGTCGGCCTATAGCCTGGATGCAATGTATACCGTACAGGAAGGGCGGGCGAAGGGCACCCTGTTCAA
ACTGCACTTTACCCAATACGACAACCATTCCGATATTCCGAGCTGGAGCGGCGGCTACGGCAACATCTTCCAGGATGAGC
GCGACGTGAAGTTCATGGTTATCGCCCCGTTCACTATTTTCTGA

Upstream 100 bases:

>100_bases
TTCGCGGTCTTTTTTACCGCCCCACATTTTGCAGTTTTATTTATTTTTTAGCGATTGACCGCTGGTCTTCGCCTTTTAAA
ACGTCAAAGAGGATATGCAC

Downstream 100 bases:

>100_bases
TGCCTGAGCGGCGGGCGTGAGCCTGCCGCACCTCTGGGAAAACGACAATGAAAAAAATGCTGCTTATTGCCATGATGGCA
GCGGGCCTGGTGGCCTGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MRTFSGKRSTLALAIAAVTAMSGWVVAPQASAAGFIDDSTLTGGIYYWQRERDRKDVTDGDKYKTNLSHSTWNANLDFQS
GYAADMFGLDIAAFTAIEMAENGDSGHPNEIAFSSRNKAYDEDYSGDKSGISLYKAAAKFKYGPAWARAGYIQPTGQTLL
APHWSFMPGTYQGAEAGANFDYGTAGALSFSYMWTNEYKAPWHIEMDDFYQNDKKTKVDYLHSVGAKYDFKNDLVLEAAF
GQAQGYIDQYFAKASYKFDVAGAPLSTSYQFYGTRDKVSNGGVNDIYDGTAWLQALTFGYKVADVLDLRLEGTWVKADGQ
QGYFLQRMTPTYASSNGRLDIWWDNRSDFNANGEKAVFFGAMYDMKNWDMPGWAFGASYVYAWDAKPGRMSSPDAYYDPD
YRLKESAYSLDAMYTVQEGRAKGTLFKLHFTQYDNHSDIPSWSGGYGNIFQDERDVKFMVIAPFTIF

Sequences:

>Translated_467_residues
MRTFSGKRSTLALAIAAVTAMSGWVVAPQASAAGFIDDSTLTGGIYYWQRERDRKDVTDGDKYKTNLSHSTWNANLDFQS
GYAADMFGLDIAAFTAIEMAENGDSGHPNEIAFSSRNKAYDEDYSGDKSGISLYKAAAKFKYGPAWARAGYIQPTGQTLL
APHWSFMPGTYQGAEAGANFDYGTAGALSFSYMWTNEYKAPWHIEMDDFYQNDKKTKVDYLHSVGAKYDFKNDLVLEAAF
GQAQGYIDQYFAKASYKFDVAGAPLSTSYQFYGTRDKVSNGGVNDIYDGTAWLQALTFGYKVADVLDLRLEGTWVKADGQ
QGYFLQRMTPTYASSNGRLDIWWDNRSDFNANGEKAVFFGAMYDMKNWDMPGWAFGASYVYAWDAKPGRMSSPDAYYDPD
YRLKESAYSLDAMYTVQEGRAKGTLFKLHFTQYDNHSDIPSWSGGYGNIFQDERDVKFMVIAPFTIF
>Mature_467_residues
MRTFSGKRSTLALAIAAVTAMSGWVVAPQASAAGFIDDSTLTGGIYYWQRERDRKDVTDGDKYKTNLSHSTWNANLDFQS
GYAADMFGLDIAAFTAIEMAENGDSGHPNEIAFSSRNKAYDEDYSGDKSGISLYKAAAKFKYGPAWARAGYIQPTGQTLL
APHWSFMPGTYQGAEAGANFDYGTAGALSFSYMWTNEYKAPWHIEMDDFYQNDKKTKVDYLHSVGAKYDFKNDLVLEAAF
GQAQGYIDQYFAKASYKFDVAGAPLSTSYQFYGTRDKVSNGGVNDIYDGTAWLQALTFGYKVADVLDLRLEGTWVKADGQ
QGYFLQRMTPTYASSNGRLDIWWDNRSDFNANGEKAVFFGAMYDMKNWDMPGWAFGASYVYAWDAKPGRMSSPDAYYDPD
YRLKESAYSLDAMYTVQEGRAKGTLFKLHFTQYDNHSDIPSWSGGYGNIFQDERDVKFMVIAPFTIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786897, Length=468, Percent_Identity=88.4615384615385, Blast_Score=859, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005318 [H]

Pfam domain/function: PF03573 OprD [H]

EC number: NA

Molecular weight: Translated: 52332; Mature: 52332

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTFSGKRSTLALAIAAVTAMSGWVVAPQASAAGFIDDSTLTGGIYYWQRERDRKDVTDG
CCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCEECCCCEECCEEEEECCCCCCCCCCC
DKYKTNLSHSTWNANLDFQSGYAADMFGLDIAAFTAIEMAENGDSGHPNEIAFSSRNKAY
CCEEECCCCCEEECCCCCCCCCCHHHHCCHHHHHEEEEHHCCCCCCCCCCEEECCCCCCC
DEDYSGDKSGISLYKAAAKFKYGPAWARAGYIQPTGQTLLAPHWSFMPGTYQGAEAGANF
CCCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
DYGTAGALSFSYMWTNEYKAPWHIEMDDFYQNDKKTKVDYLHSVGAKYDFKNDLVLEAAF
CCCCCCEEEEEEEEECCCCCCEEEEHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEEEC
GQAQGYIDQYFAKASYKFDVAGAPLSTSYQFYGTRDKVSNGGVNDIYDGTAWLQALTFGY
CCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCC
KVADVLDLRLEGTWVKADGQQGYFLQRMTPTYASSNGRLDIWWDNRSDFNANGEKAVFFG
EEEEEEEEEEECEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEE
AMYDMKNWDMPGWAFGASYVYAWDAKPGRMSSPDAYYDPDYRLKESAYSLDAMYTVQEGR
EEECCCCCCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEEECCC
AKGTLFKLHFTQYDNHSDIPSWSGGYGNIFQDERDVKFMVIAPFTIF
CCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECEEEC
>Mature Secondary Structure
MRTFSGKRSTLALAIAAVTAMSGWVVAPQASAAGFIDDSTLTGGIYYWQRERDRKDVTDG
CCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCEECCCCEECCEEEEECCCCCCCCCCC
DKYKTNLSHSTWNANLDFQSGYAADMFGLDIAAFTAIEMAENGDSGHPNEIAFSSRNKAY
CCEEECCCCCEEECCCCCCCCCCHHHHCCHHHHHEEEEHHCCCCCCCCCCEEECCCCCCC
DEDYSGDKSGISLYKAAAKFKYGPAWARAGYIQPTGQTLLAPHWSFMPGTYQGAEAGANF
CCCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
DYGTAGALSFSYMWTNEYKAPWHIEMDDFYQNDKKTKVDYLHSVGAKYDFKNDLVLEAAF
CCCCCCEEEEEEEEECCCCCCEEEEHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEEEC
GQAQGYIDQYFAKASYKFDVAGAPLSTSYQFYGTRDKVSNGGVNDIYDGTAWLQALTFGY
CCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCC
KVADVLDLRLEGTWVKADGQQGYFLQRMTPTYASSNGRLDIWWDNRSDFNANGEKAVFFG
EEEEEEEEEEECEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEE
AMYDMKNWDMPGWAFGASYVYAWDAKPGRMSSPDAYYDPDYRLKESAYSLDAMYTVQEGR
EEECCCCCCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEEECCC
AKGTLFKLHFTQYDNHSDIPSWSGGYGNIFQDERDVKFMVIAPFTIF
CCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]