Click here to switch to the map view.

The map label for this gene is gmhA [H]

Identifier: 152968810

GI number: 152968810

Start: 269479

End: 270060

Strand: Direct

Name: gmhA [H]

Synonym: KPN_00236

Alternate gene names: 152968810

Gene position: 269479-270060 (Clockwise)

Preceding gene: 152968807

Following gene: 152968811

Centisome position: 5.07

GC content: 55.33

Gene sequence:

>582_bases
ATGTACCAGGATCTTATTCGTAACGAACTGAACGAAGCCGCGGAAACGCTGGCTAACTTTCTGCAGGACGAAGCTAATAT
CCATGCTATCCAGCGTGCCGCTGTCCTGCTGGCGGATAGCTTTAAGGCGGGTGGGAAAGTGCTGTCCTGCGGTAACGGCG
GTTCCCATTGCGATGCGATGCATTTTGCGGAAGAGCTGACCGGACGTTATCGCGAAAACCGCCCGGGTTACCCGGCCATC
GCGATCTCCGACGTCAGCCACCTCTCCTGCGTGAGCAATGATTTTGGCTATGAATATGTGTTCTCCCGCTACGTTGAATC
CGTTGGCCGCGCAGGCGATGTGCTGCTCGGTATCTCCACGTCTGGCAACTCCGGCAACGTGATTAAGGCCATTGAGGCCG
CGCGGGCGCAGGGGATGAAAGTGATCACCCTGACCGGTAAAGACGGCGGTAAAATGGCCGGTAGCGCTGATGTGGAAATT
CGCGTGCCGCACTTTGGCTACGCCGACCGCATCCAGGAGATCCATATCAAAGTGATCCACATTCTGATTATGCTGATCGA
AAAAGAGATGGCGAAAGGCTAA

Upstream 100 bases:

>100_bases
AATCAAAAGAGCGAGGGATAACGCTGCCTGCTGCTTCTCGCTTCGACGGCTATCCGGTACACTGCCGGGGTTATTCCACT
CATACTGAAGGATTATCCTC

Downstream 100 bases:

>100_bases
CAGGCAGGTGAGTGTGTACTGTTGACGGTGGCCTCGCTCCGGCGCCGTCGTGATTTGTGAGGGTGAGGTGATCTATGTGC
GAACTGCTCGGGATGAGCGC

Product: phosphoheptose isomerase

Products: NA

Alternate protein names: Sedoheptulose 7-phosphate isomerase [H]

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MYQDLIRNELNEAAETLANFLQDEANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAI
AISDVSHLSCVSNDFGYEYVFSRYVESVGRAGDVLLGISTSGNSGNVIKAIEAARAQGMKVITLTGKDGGKMAGSADVEI
RVPHFGYADRIQEIHIKVIHILIMLIEKEMAKG

Sequences:

>Translated_193_residues
MYQDLIRNELNEAAETLANFLQDEANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAI
AISDVSHLSCVSNDFGYEYVFSRYVESVGRAGDVLLGISTSGNSGNVIKAIEAARAQGMKVITLTGKDGGKMAGSADVEI
RVPHFGYADRIQEIHIKVIHILIMLIEKEMAKG
>Mature_193_residues
MYQDLIRNELNEAAETLANFLQDEANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAI
AISDVSHLSCVSNDFGYEYVFSRYVESVGRAGDVLLGISTSGNSGNVIKAIEAARAQGMKVITLTGKDGGKMAGSADVEI
RVPHFGYADRIQEIHIKVIHILIMLIEKEMAKG

Specific function: Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate [H]

COG id: COG0279

COG function: function code G; Phosphoheptose isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1786416, Length=192, Percent_Identity=90.625, Blast_Score=362, Evalue=1e-102,
Organism=Escherichia coli, GI1789539, Length=171, Percent_Identity=44.4444444444444, Blast_Score=141, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004515
- InterPro:   IPR020620
- InterPro:   IPR001347 [H]

Pfam domain/function: PF01380 SIS [H]

EC number: =5.3.1.28 [H]

Molecular weight: Translated: 20872; Mature: 20872

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQDLIRNELNEAAETLANFLQDEANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHH
HFAEELTGRYRENRPGYPAIAISDVSHLSCVSNDFGYEYVFSRYVESVGRAGDVLLGIST
HHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEC
SGNSGNVIKAIEAARAQGMKVITLTGKDGGKMAGSADVEIRVPHFGYADRIQEIHIKVIH
CCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHH
ILIMLIEKEMAKG
HHHHHHHHHHHCC
>Mature Secondary Structure
MYQDLIRNELNEAAETLANFLQDEANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHH
HFAEELTGRYRENRPGYPAIAISDVSHLSCVSNDFGYEYVFSRYVESVGRAGDVLLGIST
HHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEC
SGNSGNVIKAIEAARAQGMKVITLTGKDGGKMAGSADVEIRVPHFGYADRIQEIHIKVIH
CCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHH
ILIMLIEKEMAKG
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA