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The map label for this gene is abrB

Identifier: 151221772

GI number: 151221772

Start: 1726291

End: 1727358

Strand: Reverse

Name: abrB

Synonym: NWMN_1560

Alternate gene names: 151221772

Gene position: 1727358-1726291 (Counterclockwise)

Preceding gene: 151221773

Following gene: 151221770

Centisome position: 60.0

GC content: 29.87

Gene sequence:

>1068_bases
ATGATATATAGAAATAATTTCATTGTGTTCGTTTTATCATTTTTTATTAGTATTCTACTGTATTCATCGCACGTATTACT
TCCATTTATGTTTGGTCCTATTATCGCATCAATCATTTGTGTAAAAGTTTTCAAACTTGATATTAAATGGCCATTCTTAC
TTAGTGAATTAGGTATTGTACTATTAGGTGTGCAAATCGGATCAACGTTTACGAAAAATGTCGTTATGGATATTAAAAAC
AATTGGCTTTCGATTATTGTTGTATCTATTTCGATATTATTAATTGCAATAGTAATGGCATTTGTTTTTAAAAAAATTGC
ACGTATTAATACAGAAACAGCTATTTTAAGTGTTATACCAGGAGCACTAACACAAATGCTGGTCATGGCTGAACAAGACA
AACGTGCTAATTTGTTAGTTGTTAGCTTAACGCAAACATCACGAATTATATTTGTTGTTGTTTTAGTACCGTTCATTTCA
TATTTTTTTCATGATGGTAACATGCATGCGAATGGAAAGTTAACAAAAGTCTTGCCTTTATCACAAGTATTAAACATAGG
GCAAATAGTTATTTTAGCGATAGCTATCTTTATAGTTTATCTAATTATGTCTAAAATAAAGTTTCCAACATTTCAATTAT
TAGCACCACTCATTGTATTAATTGTTTGGAATTTTTCTACAGGTTTAACATTTACACTAGATCATTGGTTGTTGAACATG
GCACAACTAATATATATGATTAGAATTGGAGTTCAAATTGCGCATTTATTGTCAGATTTAAAAGGTAGACTAGCAATCGC
AATTACAATTCAAAATATTATGTTGATAATTGGTGCGCTAATCATGGTTTATATCATACATTTCTTTGATAATAATCCTA
TTAATGAATTGTTTCTTGGTGCAGCACCAGGAGGGGTTAATCAGATAGTTTTAGTTGCATTAGCTACTGGTGCCGATGTT
GCTATGATTACGAGTTATCATATTTTCCGAATCTTTTTCATCCTATTTATTATTGCACCAGGAATTAATTACTTTTTAAA
ATATCGTTCGAATAAGCGTGAAGATTAG

Upstream 100 bases:

>100_bases
AGTCAAAACTGCTAGCGGATATTGTTATCTTAACAAACGTGAAGCTCAAGCAGCAATTTAGTCATTTTATTTTTTATTGA
AAGAAGTGGAAAACATGGCA

Downstream 100 bases:

>100_bases
AAACTATCATCCATCTAAGTTGAATTATGCTTAGGATAGAATTCATTATTAAGGTTTAAGCAAAGGTTGTACATCTATTT
TTAGATTAAGATATCTAATA

Product: ammonia monooxygenase

Products: NA

Alternate protein names: AidB regulator [H]

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MIYRNNFIVFVLSFFISILLYSSHVLLPFMFGPIIASIICVKVFKLDIKWPFLLSELGIVLLGVQIGSTFTKNVVMDIKN
NWLSIIVVSISILLIAIVMAFVFKKIARINTETAILSVIPGALTQMLVMAEQDKRANLLVVSLTQTSRIIFVVVLVPFIS
YFFHDGNMHANGKLTKVLPLSQVLNIGQIVILAIAIFIVYLIMSKIKFPTFQLLAPLIVLIVWNFSTGLTFTLDHWLLNM
AQLIYMIRIGVQIAHLLSDLKGRLAIAITIQNIMLIIGALIMVYIIHFFDNNPINELFLGAAPGGVNQIVLVALATGADV
AMITSYHIFRIFFILFIIAPGINYFLKYRSNKRED

Sequences:

>Translated_355_residues
MIYRNNFIVFVLSFFISILLYSSHVLLPFMFGPIIASIICVKVFKLDIKWPFLLSELGIVLLGVQIGSTFTKNVVMDIKN
NWLSIIVVSISILLIAIVMAFVFKKIARINTETAILSVIPGALTQMLVMAEQDKRANLLVVSLTQTSRIIFVVVLVPFIS
YFFHDGNMHANGKLTKVLPLSQVLNIGQIVILAIAIFIVYLIMSKIKFPTFQLLAPLIVLIVWNFSTGLTFTLDHWLLNM
AQLIYMIRIGVQIAHLLSDLKGRLAIAITIQNIMLIIGALIMVYIIHFFDNNPINELFLGAAPGGVNQIVLVALATGADV
AMITSYHIFRIFFILFIIAPGINYFLKYRSNKRED
>Mature_355_residues
MIYRNNFIVFVLSFFISILLYSSHVLLPFMFGPIIASIICVKVFKLDIKWPFLLSELGIVLLGVQIGSTFTKNVVMDIKN
NWLSIIVVSISILLIAIVMAFVFKKIARINTETAILSVIPGALTQMLVMAEQDKRANLLVVSLTQTSRIIFVVVLVPFIS
YFFHDGNMHANGKLTKVLPLSQVLNIGQIVILAIAIFIVYLIMSKIKFPTFQLLAPLIVLIVWNFSTGLTFTLDHWLLNM
AQLIYMIRIGVQIAHLLSDLKGRLAIAITIQNIMLIIGALIMVYIIHFFDNNPINELFLGAAPGGVNQIVLVALATGADV
AMITSYHIFRIFFILFIIAPGINYFLKYRSNKRED

Specific function: Seems to be involved in the regulation of AidB [H]

COG id: COG3180

COG function: function code R; Putative ammonia monooxygenase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AbrB family [H]

Homologues:

Organism=Escherichia coli, GI87081776, Length=352, Percent_Identity=23.5795454545455, Blast_Score=75, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017516
- InterPro:   IPR007820 [H]

Pfam domain/function: PF05145 AmoA [H]

EC number: NA

Molecular weight: Translated: 39864; Mature: 39864

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYRNNFIVFVLSFFISILLYSSHVLLPFMFGPIIASIICVKVFKLDIKWPFLLSELGIV
CEEECHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LLGVQIGSTFTKNVVMDIKNNWLSIIVVSISILLIAIVMAFVFKKIARINTETAILSVIP
EEEHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
GALTQMLVMAEQDKRANLLVVSLTQTSRIIFVVVLVPFISYFFHDGNMHANGKLTKVLPL
HHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEECCCCEEEEECH
SQVLNIGQIVILAIAIFIVYLIMSKIKFPTFQLLAPLIVLIVWNFSTGLTFTLDHWLLNM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHH
AQLIYMIRIGVQIAHLLSDLKGRLAIAITIQNIMLIIGALIMVYIIHFFDNNPINELFLG
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEE
AAPGGVNQIVLVALATGADVAMITSYHIFRIFFILFIIAPGINYFLKYRSNKRED
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC
>Mature Secondary Structure
MIYRNNFIVFVLSFFISILLYSSHVLLPFMFGPIIASIICVKVFKLDIKWPFLLSELGIV
CEEECHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LLGVQIGSTFTKNVVMDIKNNWLSIIVVSISILLIAIVMAFVFKKIARINTETAILSVIP
EEEHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
GALTQMLVMAEQDKRANLLVVSLTQTSRIIFVVVLVPFISYFFHDGNMHANGKLTKVLPL
HHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEECCCCEEEEECH
SQVLNIGQIVILAIAIFIVYLIMSKIKFPTFQLLAPLIVLIVWNFSTGLTFTLDHWLLNM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHH
AQLIYMIRIGVQIAHLLSDLKGRLAIAITIQNIMLIIGALIMVYIIHFFDNNPINELFLG
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEE
AAPGGVNQIVLVALATGADVAMITSYHIFRIFFILFIIAPGINYFLKYRSNKRED
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8002588 [H]