| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is fhs [H]
Identifier: 229577668
GI number: 229577668
Start: 2375519
End: 2377198
Strand: Reverse
Name: fhs [H]
Synonym: Smed_2298
Alternate gene names: 229577668
Gene position: 2377198-2375519 (Counterclockwise)
Preceding gene: 150397499
Following gene: 150397496
Centisome position: 62.86
GC content: 61.31
Gene sequence:
>1680_bases GTGGGAGAGGTAAAGACCGACATCGAGATCGCGCGCGCGGCGCGCAAGCAACCAATCATGGAGGTCGGCGCGAGACTCGG TATCCCGCCGGAGCATCTGCTTCCCTACGGCCATGACAAGGCCAAGGTGAGCGCCGAGTTCATCGCGGCGCAAAGGGAGA AGAAGAACGGGCGGCTCATCCTGGTCACAGCGATCAACCCGACGCCGGCGGGCGAGGGCAAGACGACGACGACCGTCGGT CTCGTCGATGGCTTGAACCGTATCGGCAAGAAGGCGATCGTCTGTATTCGCGAGGCCTCGCTCGGTCCTTGCTTCGGTAT CAAGGGCGGGGCGGCCGGTGGCGGTTATGCGCAGGTCGTGCCGATGGAGGACATCAATCTCCACTTCACCGGCGATTTCC ACGCGATCACTTCGGCCCACAACCTTCTCTCCGCCTTGATAGACAACCACATCTATTGGGGGAACGAGCAGGCGATTGAC ATCCGCCGAATTGCCTGGCGGCGGGTCATGGACATGAACGACCGGGCGCTGCGCCATATCGTCGGCTCGCTCGGCGGGGT CGCCAACGGCTATCCACGAGAGACCGGCTTCGACATTACCGTCGCCTCGGAAGTCATGGCGATCCTCTGTCTCGCGATGG ACATCAGGGACCTCGAAAGGCGGCTCGGCAACATCATCATCGGCTATCGGCGCGACAAGAGCCCGGTCTATGCGCGCGAT ATCAAGGCCGACGGAGCCATGGCGGTGCTGCTCAAGGACGCGATGCAGCCGAACCTGGTGCAGACGCTCGAGAACAATCC GGCATTCGTGCACGGCGGTCCGTTCGCCAATATCGCGCATGGCTGCAATTCGGTCGTTGCCACCACGACGGCGCTGAAGC TTGCCGATTACGTCGTGACCGAAGCGGGTTTCGGTGCGGATCTCGGTGCCGAGAAGTTCTTCGACATAAAGTGCCGCAAG GCAGGCCTCATGCCGGATGCTGCGGTGATCGTTGCGACGGTCCGGGCAATCAAGATGAACGGCGGCGTGAAGAAGGAGGA TCTCGCGAAAGAAAATGTCGAAGCGCTCAGGAAGGGGTGCCCGAACCTCGGGCGCCACATCCAGAACGTCAAGAAGTTCG GCGTACCGGTGCTCGTCGCAATCAACCACTTCACTTCCGATACCGAGGCCGAAATCCAGGCGATCAAGGACTATGTCCGC ACGCTCGGTTCCGAAGCGGTCTTATGCAAGCATTGGGCAGAGGGCTCAGCCGGCATCGAGGAACTTGCCGATAAGGTTGC CGATCTCGCCGACGCCGGCCATTCGCAGTTTTCGCCGCTCTATCCCGACGAGATGCCGCTTTTTCAGAAGATCGAGGCGA TCGCCAAGGATATTTATCACGCGAGCGAGGTGATCGCCGACAAGCTGGTGCGCGACCAGCTTCGAATCTGGGAAGACCAG GGTTACGGTCATCTGCCGATCTGCATGGCCAAGACGCAATATTCCTTCTCCACCGACCCGAATCTCCGCGGCGCGCCCAC CGGCCACACCGTACCGATACGCGAGGTTCGCCTGGCCGCCGGCGCTGGGTTCATCGTCGTCATCACCGGCGAGATCATGA CGATGCCGGGCCTGCCGAAAGTACCCTCTTCGGAGCGGATACGGCTCGACGAGGAGGGATACATCGAGGGTTTGTTCTGA
Upstream 100 bases:
>100_bases TATTCTTGCCCGTTGACGGGCTTCGTGCGAGCGTAGGCAAAGGAAACGGACTTGCGGATGCCGCGGAGGAGGCGGGATGC GCAAGCAACTGGGGGAAGCC
Downstream 100 bases:
>100_bases AGGGGATTCAGAGGCTGGGCTGGCGCCGCGGGCCATCATGCGCGCCGTCAACGGCAATACCGATACCCGTTCCTTCTTTC GATGACATCGAGATGCAGAT
Product: formate--tetrahydrofolate ligase
Products: NA
Alternate protein names: Formyltetrahydrofolate synthetase; FHS; FTHFS [H]
Number of amino acids: Translated: 559; Mature: 558
Protein sequence:
>559_residues MGEVKTDIEIARAARKQPIMEVGARLGIPPEHLLPYGHDKAKVSAEFIAAQREKKNGRLILVTAINPTPAGEGKTTTTVG LVDGLNRIGKKAIVCIREASLGPCFGIKGGAAGGGYAQVVPMEDINLHFTGDFHAITSAHNLLSALIDNHIYWGNEQAID IRRIAWRRVMDMNDRALRHIVGSLGGVANGYPRETGFDITVASEVMAILCLAMDIRDLERRLGNIIIGYRRDKSPVYARD IKADGAMAVLLKDAMQPNLVQTLENNPAFVHGGPFANIAHGCNSVVATTTALKLADYVVTEAGFGADLGAEKFFDIKCRK AGLMPDAAVIVATVRAIKMNGGVKKEDLAKENVEALRKGCPNLGRHIQNVKKFGVPVLVAINHFTSDTEAEIQAIKDYVR TLGSEAVLCKHWAEGSAGIEELADKVADLADAGHSQFSPLYPDEMPLFQKIEAIAKDIYHASEVIADKLVRDQLRIWEDQ GYGHLPICMAKTQYSFSTDPNLRGAPTGHTVPIREVRLAAGAGFIVVITGEIMTMPGLPKVPSSERIRLDEEGYIEGLF
Sequences:
>Translated_559_residues MGEVKTDIEIARAARKQPIMEVGARLGIPPEHLLPYGHDKAKVSAEFIAAQREKKNGRLILVTAINPTPAGEGKTTTTVG LVDGLNRIGKKAIVCIREASLGPCFGIKGGAAGGGYAQVVPMEDINLHFTGDFHAITSAHNLLSALIDNHIYWGNEQAID IRRIAWRRVMDMNDRALRHIVGSLGGVANGYPRETGFDITVASEVMAILCLAMDIRDLERRLGNIIIGYRRDKSPVYARD IKADGAMAVLLKDAMQPNLVQTLENNPAFVHGGPFANIAHGCNSVVATTTALKLADYVVTEAGFGADLGAEKFFDIKCRK AGLMPDAAVIVATVRAIKMNGGVKKEDLAKENVEALRKGCPNLGRHIQNVKKFGVPVLVAINHFTSDTEAEIQAIKDYVR TLGSEAVLCKHWAEGSAGIEELADKVADLADAGHSQFSPLYPDEMPLFQKIEAIAKDIYHASEVIADKLVRDQLRIWEDQ GYGHLPICMAKTQYSFSTDPNLRGAPTGHTVPIREVRLAAGAGFIVVITGEIMTMPGLPKVPSSERIRLDEEGYIEGLF >Mature_558_residues GEVKTDIEIARAARKQPIMEVGARLGIPPEHLLPYGHDKAKVSAEFIAAQREKKNGRLILVTAINPTPAGEGKTTTTVGL VDGLNRIGKKAIVCIREASLGPCFGIKGGAAGGGYAQVVPMEDINLHFTGDFHAITSAHNLLSALIDNHIYWGNEQAIDI RRIAWRRVMDMNDRALRHIVGSLGGVANGYPRETGFDITVASEVMAILCLAMDIRDLERRLGNIIIGYRRDKSPVYARDI KADGAMAVLLKDAMQPNLVQTLENNPAFVHGGPFANIAHGCNSVVATTTALKLADYVVTEAGFGADLGAEKFFDIKCRKA GLMPDAAVIVATVRAIKMNGGVKKEDLAKENVEALRKGCPNLGRHIQNVKKFGVPVLVAINHFTSDTEAEIQAIKDYVRT LGSEAVLCKHWAEGSAGIEELADKVADLADAGHSQFSPLYPDEMPLFQKIEAIAKDIYHASEVIADKLVRDQLRIWEDQG YGHLPICMAKTQYSFSTDPNLRGAPTGHTVPIREVRLAAGAGFIVVITGEIMTMPGLPKVPSSERIRLDEEGYIEGLF
Specific function: Unknown
COG id: COG2759
COG function: function code F; Formyltetrahydrofolate synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the formate--tetrahydrofolate ligase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=621, Percent_Identity=42.1900161030596, Blast_Score=458, Evalue=1e-129, Organism=Homo sapiens, GI36796743, Length=625, Percent_Identity=41.92, Blast_Score=444, Evalue=1e-124, Organism=Homo sapiens, GI310124614, Length=86, Percent_Identity=38.3720930232558, Blast_Score=71, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17568737, Length=625, Percent_Identity=44.8, Blast_Score=469, Evalue=1e-132, Organism=Caenorhabditis elegans, GI17568739, Length=625, Percent_Identity=44.8, Blast_Score=469, Evalue=1e-132, Organism=Saccharomyces cerevisiae, GI6319558, Length=633, Percent_Identity=42.1800947867299, Blast_Score=455, Evalue=1e-128, Organism=Saccharomyces cerevisiae, GI6321643, Length=626, Percent_Identity=42.1725239616613, Blast_Score=448, Evalue=1e-127, Organism=Drosophila melanogaster, GI62472483, Length=621, Percent_Identity=42.0289855072464, Blast_Score=457, Evalue=1e-129, Organism=Drosophila melanogaster, GI45551871, Length=621, Percent_Identity=42.0289855072464, Blast_Score=457, Evalue=1e-129, Organism=Drosophila melanogaster, GI24645718, Length=621, Percent_Identity=42.0289855072464, Blast_Score=457, Evalue=1e-129, Organism=Drosophila melanogaster, GI17137370, Length=621, Percent_Identity=42.0289855072464, Blast_Score=457, Evalue=1e-129,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000559 - InterPro: IPR020628 [H]
Pfam domain/function: PF01268 FTHFS [H]
EC number: =6.3.4.3 [H]
Molecular weight: Translated: 60580; Mature: 60448
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS00721 FTHFS_1 ; PS00722 FTHFS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEVKTDIEIARAARKQPIMEVGARLGIPPEHLLPYGHDKAKVSAEFIAAQREKKNGRLI CCCCHHHHHHHHHHHCCCHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEE LVTAINPTPAGEGKTTTTVGLVDGLNRIGKKAIVCIREASLGPCFGIKGGAAGGGYAQVV EEEEECCCCCCCCCCEEEHHHHHHHHHHCHHEEEEEECCCCCCCCCCCCCCCCCCCEEEE PMEDINLHFTGDFHAITSAHNLLSALIDNHIYWGNEQAIDIRRIAWRRVMDMNDRALRHI EECCCEEEECCCHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHH VGSLGGVANGYPRETGFDITVASEVMAILCLAMDIRDLERRLGNIIIGYRRDKSPVYARD HHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEE IKADGAMAVLLKDAMQPNLVQTLENNPAFVHGGPFANIAHGCNSVVATTTALKLADYVVT CCCCCHHHHHHHHHCCCHHHHHHCCCCCEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHH EAGFGADLGAEKFFDIKCRKAGLMPDAAVIVATVRAIKMNGGVKKEDLAKENVEALRKGC CCCCCCCCCCCCEEEEEEHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC PNLGRHIQNVKKFGVPVLVAINHFTSDTEAEIQAIKDYVRTLGSEAVLCKHWAEGSAGIE CHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEHHHHCCCCCCHH ELADKVADLADAGHSQFSPLYPDEMPLFQKIEAIAKDIYHASEVIADKLVRDQLRIWEDQ HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GYGHLPICMAKTQYSFSTDPNLRGAPTGHTVPIREVRLAAGAGFIVVITGEIMTMPGLPK CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCEEECCCCCC VPSSERIRLDEEGYIEGLF CCCCCCEEECCCCCCCCCC >Mature Secondary Structure GEVKTDIEIARAARKQPIMEVGARLGIPPEHLLPYGHDKAKVSAEFIAAQREKKNGRLI CCCHHHHHHHHHHHCCCHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEE LVTAINPTPAGEGKTTTTVGLVDGLNRIGKKAIVCIREASLGPCFGIKGGAAGGGYAQVV EEEEECCCCCCCCCCEEEHHHHHHHHHHCHHEEEEEECCCCCCCCCCCCCCCCCCCEEEE PMEDINLHFTGDFHAITSAHNLLSALIDNHIYWGNEQAIDIRRIAWRRVMDMNDRALRHI EECCCEEEECCCHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHH VGSLGGVANGYPRETGFDITVASEVMAILCLAMDIRDLERRLGNIIIGYRRDKSPVYARD HHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEE IKADGAMAVLLKDAMQPNLVQTLENNPAFVHGGPFANIAHGCNSVVATTTALKLADYVVT CCCCCHHHHHHHHHCCCHHHHHHCCCCCEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHH EAGFGADLGAEKFFDIKCRKAGLMPDAAVIVATVRAIKMNGGVKKEDLAKENVEALRKGC CCCCCCCCCCCCEEEEEEHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC PNLGRHIQNVKKFGVPVLVAINHFTSDTEAEIQAIKDYVRTLGSEAVLCKHWAEGSAGIE CHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEHHHHCCCCCCHH ELADKVADLADAGHSQFSPLYPDEMPLFQKIEAIAKDIYHASEVIADKLVRDQLRIWEDQ HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GYGHLPICMAKTQYSFSTDPNLRGAPTGHTVPIREVRLAAGAGFIVVITGEIMTMPGLPK CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCEEECCCCCC VPSSERIRLDEEGYIEGLF CCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA