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The map label for this gene is rsmI [H]

Identifier: 150398728

GI number: 150398728

Start: 3750240

End: 3751202

Strand: Direct

Name: rsmI [H]

Synonym: Smed_3544

Alternate gene names: 150398728

Gene position: 3750240-3751202 (Clockwise)

Preceding gene: 150398720

Following gene: 150398729

Centisome position: 99.16

GC content: 66.56

Gene sequence:

>963_bases
ATGATCGGGGCCACGAGGGATTGGAAGGCGGCGTTGGAGAAGCAGCAATCGGCGGAAGTGTCGGAAAAGGAACGGCAACG
CGGCTTTCGCCTGCACAATGCGAATATTCCCGCGCGTCCGCTGGAGCCGTGCCTTTATCTCGTCGCAACGCCGATCGGCA
ATCTCGGCGACATCACCCTCAGAGCCCTCGAGACAATTGCCGCGGCGGACGTCCTCGCCTGCGAAGACACGCGCGTGACG
CGGGTCCTGCTCGACCGCTACGGCATCGTCAACCGGCCTATCGCCTATCACGAGCACAATGCCGCCGAGGCAGGTCCGCG
CCTGCTTGCAGCGCTTGACGGCGGCAAATCGGTGGCACTCGTTTCCGACGCAGGCACGCCGCTCGTCTCCGATCCTGGCT
ATCGTCTGGCGCAGCAGGCGGTCGAGGCCGGGTACCGGGTGGTGCCGGTGCCGGGACCCTCGGCGCCGCTTGCGGCTCTC
GTCGGTTCCGGCCTTCCGAGCGATGCCTTCCTCTTCGCCGGCTTCCTGCCGGGTAAGGACAAGGCCAAGCGCGACCGGCT
TGCGGAACTCGCCAACATCCCGGCCACTCTCATCTTCTTCGAGTCCCCGCATCGCATCGCCGCGACCCTCACTGCTGCCG
CCGAGGTTCTCGGCGAAGACCGGAGGGCGGCCGTCTGCCGCGAACTGACCAAGGCTTTCGAGGAGTTCCGCCGAGGCACG
CTCGGCGAGCTCAGGACAGCTTACGACGAAGGCGGCAATGTGAAGGGCGAGATCGTCCTGGTGGTCGGTCCGCCCGAGGC
AAGGCCGCAGCCGGAGGCAGCCGATATCGACGCGCTCCTCAGGGCGCTTGCCCGAGATCTGCCGATGGGCAAGGCAGCGA
CGGAGGCCGCGCATCGCACAGGACTTGCACGCAAGGCGCTTTACGACCGGCTCCTCGAGCTCAAGGACAGCGATGAAGGC
TGA

Upstream 100 bases:

>100_bases
CTGTGGGCGCGGCCCGCCCTTGCCCCGGGCTTCCCGCTCACTCATAAAGGGCGCGAGCCGGCTCGTCGTAACCATCGTCC
GGTATTTGCAAGGGCCCGCA

Downstream 100 bases:

>100_bases
GCGATCGGACGACCTCAAGCTGAAGGCTCTGAAGCGGGGCCATCTGGCCGAATACCGCGCGGCGCTCTGCCTGATCCTGA
AAGGTTACCGCATCGTTGCG

Product: uroporphyrin-III C/tetrapyrrole methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MIGATRDWKAALEKQQSAEVSEKERQRGFRLHNANIPARPLEPCLYLVATPIGNLGDITLRALETIAAADVLACEDTRVT
RVLLDRYGIVNRPIAYHEHNAAEAGPRLLAALDGGKSVALVSDAGTPLVSDPGYRLAQQAVEAGYRVVPVPGPSAPLAAL
VGSGLPSDAFLFAGFLPGKDKAKRDRLAELANIPATLIFFESPHRIAATLTAAAEVLGEDRRAAVCRELTKAFEEFRRGT
LGELRTAYDEGGNVKGEIVLVVGPPEARPQPEAADIDALLRALARDLPMGKAATEAAHRTGLARKALYDRLLELKDSDEG

Sequences:

>Translated_320_residues
MIGATRDWKAALEKQQSAEVSEKERQRGFRLHNANIPARPLEPCLYLVATPIGNLGDITLRALETIAAADVLACEDTRVT
RVLLDRYGIVNRPIAYHEHNAAEAGPRLLAALDGGKSVALVSDAGTPLVSDPGYRLAQQAVEAGYRVVPVPGPSAPLAAL
VGSGLPSDAFLFAGFLPGKDKAKRDRLAELANIPATLIFFESPHRIAATLTAAAEVLGEDRRAAVCRELTKAFEEFRRGT
LGELRTAYDEGGNVKGEIVLVVGPPEARPQPEAADIDALLRALARDLPMGKAATEAAHRTGLARKALYDRLLELKDSDEG
>Mature_320_residues
MIGATRDWKAALEKQQSAEVSEKERQRGFRLHNANIPARPLEPCLYLVATPIGNLGDITLRALETIAAADVLACEDTRVT
RVLLDRYGIVNRPIAYHEHNAAEAGPRLLAALDGGKSVALVSDAGTPLVSDPGYRLAQQAVEAGYRVVPVPGPSAPLAAL
VGSGLPSDAFLFAGFLPGKDKAKRDRLAELANIPATLIFFESPHRIAATLTAAAEVLGEDRRAAVCRELTKAFEEFRRGT
LGELRTAYDEGGNVKGEIVLVVGPPEARPQPEAADIDALLRALARDLPMGKAATEAAHRTGLARKALYDRLLELKDSDEG

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=270, Percent_Identity=48.5185185185185, Blast_Score=224, Evalue=7e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 34219; Mature: 34219

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGATRDWKAALEKQQSAEVSEKERQRGFRLHNANIPARPLEPCLYLVATPIGNLGDITL
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHCCCCCCHHHHH
RALETIAAADVLACEDTRVTRVLLDRYGIVNRPIAYHEHNAAEAGPRLLAALDGGKSVAL
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCEEEEEECCCCEEEE
VSDAGTPLVSDPGYRLAQQAVEAGYRVVPVPGPSAPLAALVGSGLPSDAFLFAGFLPGKD
EECCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCCCCHHHEECCCCCCC
KAKRDRLAELANIPATLIFFESPHRIAATLTAAAEVLGEDRRAAVCRELTKAFEEFRRGT
HHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
LGELRTAYDEGGNVKGEIVLVVGPPEARPQPEAADIDALLRALARDLPMGKAATEAAHRT
HHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH
GLARKALYDRLLELKDSDEG
HHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIGATRDWKAALEKQQSAEVSEKERQRGFRLHNANIPARPLEPCLYLVATPIGNLGDITL
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHCCCCCCHHHHH
RALETIAAADVLACEDTRVTRVLLDRYGIVNRPIAYHEHNAAEAGPRLLAALDGGKSVAL
HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCEEEEEECCCCEEEE
VSDAGTPLVSDPGYRLAQQAVEAGYRVVPVPGPSAPLAALVGSGLPSDAFLFAGFLPGKD
EECCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCCCCHHHEECCCCCCC
KAKRDRLAELANIPATLIFFESPHRIAATLTAAAEVLGEDRRAAVCRELTKAFEEFRRGT
HHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
LGELRTAYDEGGNVKGEIVLVVGPPEARPQPEAADIDALLRALARDLPMGKAATEAAHRT
HHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH
GLARKALYDRLLELKDSDEG
HHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]