| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150398713
Identifier: 150398713
GI number: 150398713
Start: 3737358
End: 3738638
Strand: Reverse
Name: 150398713
Synonym: Smed_3529
Alternate gene names: NA
Gene position: 3738638-3737358 (Counterclockwise)
Preceding gene: 150398714
Following gene: 150398712
Centisome position: 98.86
GC content: 62.45
Gene sequence:
>1281_bases ATGACCAAGAATTTCATCCGCACCGCTGCACTGGCGCTCATGACGGCGACATCGGCGCTGGCGTTGCAACCGGCAAATGC GGCCCCCGATGCCGCCGCGGTCGTCAAGCATTACGCAGCCGTCGCACATGCCAAATACGAGGACGCGCTGACGACGGCTG AGGCACTGGACAAGGCCGTCGATGCGCTGATCGCAAGCCCGAGCGAAGAAACGCTGAAGGCCGCGCGCGAGGCCTGGCTC AAGGCACGCAACCCTTATCAGGAAACCGAAGTCTACCGTTTCGGCAATACGATCGTCGACGAATGGGAAGGCAAAGTGAA TGCCTGGCCGCTCGACGAGGGCCTCATCGACTATGTCGACGCGAGCTACGGCACCGAAAGCGATGAAAACGCCCTCTTCA CCGCCAATGTGATCGCCAACAAGGTGCTCAAGATCGACGGACAGGATGTCGATGCGACGAGCATCACGCCGGAGCTCATT TCCGGCACGCTGCAGGAAGCCGGCGGCATCGAGGCGAATGTCGCGACCGGCTATCATGCGATCGAATTCCTGCTCTGGGG ACAGGATCTGAACGGGACTGGTCCCGGCGCCGGCAACCGGTCCTACACGGATTTCGACACCGAGGCCTGCACCAATGGCA ATTGCGACCGCCGCGCCGCCTATCTGAAGGCGGCCACCAGCCTGCTCGTCGCCGACCTCAAGGAAATGGTCGCGAACTGG ACTCCCGACGGCGCAGCCACCAAGGCTGTCGAGGCGGATCCGAAGGCCGGCCTGGTCGCGATCCTGACCGGCATGGGTTC GCTCTCTTATGGCGAGCTTGCGGGCGAACGCATGAAGCTCGGCCTGCTTCTCCATGATCCGGAAGAGGAACACGATTGCT TCTCCGACAACACCCACAACTCGCATCTCCACGACGCGATCGGCATCCAGTCGGCCTATAGCGGTGAATATACCCGCGTC GACGGCGGCAAGCTTACCGGTCCCTCCCTCTCCGAACTGGTCGGCGCCAAGGACGCGGCCCTCGACAAGGAGATGAAGGA CAATCTGGGCGCCACGGTCGAAAAGATGCAGGCGATGGCCAAGCGCGCCGAGACGGTCGAAGCCTACGACCAGATGATCG GTGAGGGAAATGCGGAGGGCAACGCAACGGTTCAGGCCGCAATCGACGGGCTGATCGCCCAGGCCAAGACGGTCGAACGG GTCATCGCCGCGCTCGAACTCGGCACCGTCGAGCTTGAAGGTTCCGACAGCCTGGACAATCCCGGAGCGGTCTTCCAATA A
Upstream 100 bases:
>100_bases AACTATACACTTTGACACCAGTTTGCTTTTGGTCCATGACTCTTGCGCTTTCACGGGGCTGGAGCCTGTGCGCTCTACCG ACGAGCATAAGGAGAGGGTC
Downstream 100 bases:
>100_bases GCTGAAAAGGCGGGCCGCTGCGGACAGGCGGCCCGGCCCTCTTCGATGAGGATAATCGCCCGCTTCCTTGCGCTGCCGCT GGTCGCGCTTATCGGTATCG
Product: putative iron-regulated protein
Products: NA
Alternate protein names: Iron-Regulated Protein A; Insulin-Cleaving Metalloproteinase Outer Membrane Protein; Peptidase; Imelysin; Lipoprotein; Peptidase Imelysin Family; Insulin-Cleaving Metalloproteinase Outer Membrane; Iron-Regulated Lipoprotein; Imelysin Family; Exported Protein
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MTKNFIRTAALALMTATSALALQPANAAPDAAAVVKHYAAVAHAKYEDALTTAEALDKAVDALIASPSEETLKAAREAWL KARNPYQETEVYRFGNTIVDEWEGKVNAWPLDEGLIDYVDASYGTESDENALFTANVIANKVLKIDGQDVDATSITPELI SGTLQEAGGIEANVATGYHAIEFLLWGQDLNGTGPGAGNRSYTDFDTEACTNGNCDRRAAYLKAATSLLVADLKEMVANW TPDGAATKAVEADPKAGLVAILTGMGSLSYGELAGERMKLGLLLHDPEEEHDCFSDNTHNSHLHDAIGIQSAYSGEYTRV DGGKLTGPSLSELVGAKDAALDKEMKDNLGATVEKMQAMAKRAETVEAYDQMIGEGNAEGNATVQAAIDGLIAQAKTVER VIAALELGTVELEGSDSLDNPGAVFQ
Sequences:
>Translated_426_residues MTKNFIRTAALALMTATSALALQPANAAPDAAAVVKHYAAVAHAKYEDALTTAEALDKAVDALIASPSEETLKAAREAWL KARNPYQETEVYRFGNTIVDEWEGKVNAWPLDEGLIDYVDASYGTESDENALFTANVIANKVLKIDGQDVDATSITPELI SGTLQEAGGIEANVATGYHAIEFLLWGQDLNGTGPGAGNRSYTDFDTEACTNGNCDRRAAYLKAATSLLVADLKEMVANW TPDGAATKAVEADPKAGLVAILTGMGSLSYGELAGERMKLGLLLHDPEEEHDCFSDNTHNSHLHDAIGIQSAYSGEYTRV DGGKLTGPSLSELVGAKDAALDKEMKDNLGATVEKMQAMAKRAETVEAYDQMIGEGNAEGNATVQAAIDGLIAQAKTVER VIAALELGTVELEGSDSLDNPGAVFQ >Mature_425_residues TKNFIRTAALALMTATSALALQPANAAPDAAAVVKHYAAVAHAKYEDALTTAEALDKAVDALIASPSEETLKAAREAWLK ARNPYQETEVYRFGNTIVDEWEGKVNAWPLDEGLIDYVDASYGTESDENALFTANVIANKVLKIDGQDVDATSITPELIS GTLQEAGGIEANVATGYHAIEFLLWGQDLNGTGPGAGNRSYTDFDTEACTNGNCDRRAAYLKAATSLLVADLKEMVANWT PDGAATKAVEADPKAGLVAILTGMGSLSYGELAGERMKLGLLLHDPEEEHDCFSDNTHNSHLHDAIGIQSAYSGEYTRVD GGKLTGPSLSELVGAKDAALDKEMKDNLGATVEKMQAMAKRAETVEAYDQMIGEGNAEGNATVQAAIDGLIAQAKTVERV IAALELGTVELEGSDSLDNPGAVFQ
Specific function: Unknown
COG id: COG3487
COG function: function code P; Uncharacterized iron-regulated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45030; Mature: 44899
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKNFIRTAALALMTATSALALQPANAAPDAAAVVKHYAAVAHAKYEDALTTAEALDKAV CCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DALIASPSEETLKAAREAWLKARNPYQETEVYRFGNTIVDEWEGKVNAWPLDEGLIDYVD HHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHH ASYGTESDENALFTANVIANKVLKIDGQDVDATSITPELISGTLQEAGGIEANVATGYHA CCCCCCCCCCCEEEHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEHHCCHHE IEFLLWGQDLNGTGPGAGNRSYTDFDTEACTNGNCDRRAAYLKAATSLLVADLKEMVANW EEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC TPDGAATKAVEADPKAGLVAILTGMGSLSYGELAGERMKLGLLLHDPEEEHDCFSDNTHN CCCCCCCCCCCCCCCCCHHHEECCCCCCCHHHHCCCCEEEEEEEECCCHHHHCCCCCCCC SHLHDAIGIQSAYSGEYTRVDGGKLTGPSLSELVGAKDAALDKEMKDNLGATVEKMQAMA CHHHHHHCCCHHCCCCEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHH KRAETVEAYDQMIGEGNAEGNATVQAAIDGLIAQAKTVERVIAALELGTVELEGSDSLDN HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCC PGAVFQ CCCCCC >Mature Secondary Structure TKNFIRTAALALMTATSALALQPANAAPDAAAVVKHYAAVAHAKYEDALTTAEALDKAV CCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DALIASPSEETLKAAREAWLKARNPYQETEVYRFGNTIVDEWEGKVNAWPLDEGLIDYVD HHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHH ASYGTESDENALFTANVIANKVLKIDGQDVDATSITPELISGTLQEAGGIEANVATGYHA CCCCCCCCCCCEEEHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEHHCCHHE IEFLLWGQDLNGTGPGAGNRSYTDFDTEACTNGNCDRRAAYLKAATSLLVADLKEMVANW EEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC TPDGAATKAVEADPKAGLVAILTGMGSLSYGELAGERMKLGLLLHDPEEEHDCFSDNTHN CCCCCCCCCCCCCCCCCHHHEECCCCCCCHHHHCCCCEEEEEEEECCCHHHHCCCCCCCC SHLHDAIGIQSAYSGEYTRVDGGKLTGPSLSELVGAKDAALDKEMKDNLGATVEKMQAMA CHHHHHHCCCHHCCCCEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHH KRAETVEAYDQMIGEGNAEGNATVQAAIDGLIAQAKTVERVIAALELGTVELEGSDSLDN HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCC PGAVFQ CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA