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The map label for this gene is crtK [H]

Identifier: 150398704

GI number: 150398704

Start: 3722251

End: 3722784

Strand: Reverse

Name: crtK [H]

Synonym: Smed_3520

Alternate gene names: 150398704

Gene position: 3722784-3722251 (Counterclockwise)

Preceding gene: 150398706

Following gene: 150398703

Centisome position: 98.44

GC content: 61.05

Gene sequence:

>534_bases
ATGAACAGAACGCTCGTACATATCCTCTTCGTCACAGCCGTGCTCGGCCTTGGCCTCGCCATCGGCTATATCAACATCCC
CGATGCATGGTATCGATCGCTGGCAAAGCCGGACTTCACCCCGCCCGACTGGATTTTCGCTCCAGCCTGGTCCCTTCTTT
ATATCATGATCGGCATCGCCGGCGCGCGCAGTTTTCTGGGTCGTCGCCGCGCGGCTGGTCTTTCAGGCGATCGCCGCGCG
GCTGGTCTTCTGGGCGATCGCCGCGCGGCTGGTCTTTCAGGCGATCGCCGCGCGGCTCAGTGGCCACTCTGGCTCGCCCA
GATGGTCCTGAACTTTCTCTGGTCGCCGCTGTTTTTCGGGTTGCACCAGATCGCTGCCGCGCTGGTCGTCATCTGCCTGC
TGCTCGCGTCCATCGCAGCATTCATCATCGCGAGCTTGCGGCAGGACGGGATTTCGGCCCTGCTGTTTGTGCCCTATCTT
GCCTGGGTCGCCTTTGCGACCTTGCTCAACGGCTCGATTTTCCTCATGAATTGA

Upstream 100 bases:

>100_bases
AACGCCGGGAGCTCTGCATGGATCATCATATAGGTGGCGCCGCTTCACCGCCAAACGGGCAGCCGCTGGAAATCATGGCT
TGCAGCACCATCTAGCAGGC

Downstream 100 bases:

>100_bases
GCTTGCCGCGTCGCAACCGGCATGCCAGTCTCCGGAAAAATCGGGCAGTGGGGCCCCGGAATCAAGGCAAGCCGATCCAT
GGATGAGAGCGATCCTCATG

Product: TspO and MBR like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MNRTLVHILFVTAVLGLGLAIGYINIPDAWYRSLAKPDFTPPDWIFAPAWSLLYIMIGIAGARSFLGRRRAAGLSGDRRA
AGLLGDRRAAGLSGDRRAAQWPLWLAQMVLNFLWSPLFFGLHQIAAALVVICLLLASIAAFIIASLRQDGISALLFVPYL
AWVAFATLLNGSIFLMN

Sequences:

>Translated_177_residues
MNRTLVHILFVTAVLGLGLAIGYINIPDAWYRSLAKPDFTPPDWIFAPAWSLLYIMIGIAGARSFLGRRRAAGLSGDRRA
AGLLGDRRAAGLSGDRRAAQWPLWLAQMVLNFLWSPLFFGLHQIAAALVVICLLLASIAAFIIASLRQDGISALLFVPYL
AWVAFATLLNGSIFLMN
>Mature_177_residues
MNRTLVHILFVTAVLGLGLAIGYINIPDAWYRSLAKPDFTPPDWIFAPAWSLLYIMIGIAGARSFLGRRRAAGLSGDRRA
AGLLGDRRAAGLSGDRRAAQWPLWLAQMVLNFLWSPLFFGLHQIAAALVVICLLLASIAAFIIASLRQDGISALLFVPYL
AWVAFATLLNGSIFLMN

Specific function: Unknown

COG id: COG3476

COG function: function code T; Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TspO/BZRP family [H]

Homologues:

Organism=Homo sapiens, GI74275350, Length=148, Percent_Identity=33.1081081081081, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI19920472, Length=152, Percent_Identity=35.5263157894737, Blast_Score=86, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004307 [H]

Pfam domain/function: PF03073 TspO_MBR [H]

EC number: NA

Molecular weight: Translated: 19326; Mature: 19326

Theoretical pI: Translated: 11.19; Mature: 11.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTLVHILFVTAVLGLGLAIGYINIPDAWYRSLAKPDFTPPDWIFAPAWSLLYIMIGIA
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
GARSFLGRRRAAGLSGDRRAAGLLGDRRAAGLSGDRRAAQWPLWLAQMVLNFLWSPLFFG
HHHHHHHHHHHCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LHQIAAALVVICLLLASIAAFIIASLRQDGISALLFVPYLAWVAFATLLNGSIFLMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
>Mature Secondary Structure
MNRTLVHILFVTAVLGLGLAIGYINIPDAWYRSLAKPDFTPPDWIFAPAWSLLYIMIGIA
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
GARSFLGRRRAAGLSGDRRAAGLLGDRRAAGLSGDRRAAQWPLWLAQMVLNFLWSPLFFG
HHHHHHHHHHHCCCCCCHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LHQIAAALVVICLLLASIAAFIIASLRQDGISALLFVPYLAWVAFATLLNGSIFLMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2747617 [H]